RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.3■□□□□ 0.84
GTF2F2-201ENST00000340473 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
GTF2F2-201ENST00000340473 ARHGAP5Q13017 1502 aa20.29■□□□□ 0.84
GTF2F2-201ENST00000340473 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
GTF2F2-201ENST00000340473 ZNF777Q9ULD5 760 aaPredicted RBP20.29■□□□□ 0.84
GTF2F2-201ENST00000340473 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
GTF2F2-201ENST00000340473 GLI2P10070 1586 aa20.28■□□□□ 0.84
GTF2F2-201ENST00000340473 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
GTF2F2-201ENST00000340473 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
GTF2F2-201ENST00000340473 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
GTF2F2-201ENST00000340473 ITGAEP38570 1179 aa20.25■□□□□ 0.83
GTF2F2-201ENST00000340473 FAM69CQ0P6D2 419 aa20.24■□□□□ 0.83
GTF2F2-201ENST00000340473 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
GTF2F2-201ENST00000340473 EFCAB2Q5VUJ9 269 aa20.22■□□□□ 0.83
GTF2F2-201ENST00000340473 KIF13AQ9H1H9 1805 aa20.21■□□□□ 0.83
GTF2F2-201ENST00000340473 FANCAO15360 1455 aa20.2■□□□□ 0.82
GTF2F2-201ENST00000340473 PTPRKQ15262 1439 aa20.19■□□□□ 0.82
GTF2F2-201ENST00000340473 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
GTF2F2-201ENST00000340473 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
GTF2F2-201ENST00000340473 DAPK1P53355 1430 aa20.17■□□□□ 0.82
GTF2F2-201ENST00000340473 ABCC5O15440 1437 aa20.17■□□□□ 0.82
GTF2F2-201ENST00000340473 MBD5Q9P267 1494 aa20.17■□□□□ 0.82
GTF2F2-201ENST00000340473 ABCC1P33527 1531 aa20.16■□□□□ 0.82
GTF2F2-201ENST00000340473 HNRNPMP52272 730 aaKnown RBP eCLIP20.16■□□□□ 0.82
GTF2F2-201ENST00000340473 ARHGEF12Q9NZN5 1544 aa20.16■□□□□ 0.82
GTF2F2-201ENST00000340473 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
GTF2F2-201ENST00000340473 KIAA1107Q9UPP5 1409 aa20.15■□□□□ 0.82
GTF2F2-201ENST00000340473 ARHGEF5Q12774 1597 aa20.14■□□□□ 0.81
GTF2F2-201ENST00000340473 AKNAQ7Z591 1439 aa20.13■□□□□ 0.81
GTF2F2-201ENST00000340473 CFAP74Q9C0B2 1584 aa20.13■□□□□ 0.81
GTF2F2-201ENST00000340473 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
GTF2F2-201ENST00000340473 PPRC1Q5VV67 1664 aaKnown RBP20.13■□□□□ 0.81
GTF2F2-201ENST00000340473 TSPOAP1O95153 1857 aa20.12■□□□□ 0.81
GTF2F2-201ENST00000340473 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
GTF2F2-201ENST00000340473 CHIC2Q9UKJ5 165 aa20.1■□□□□ 0.81
GTF2F2-201ENST00000340473 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
GTF2F2-201ENST00000340473 NEO1Q92859 1461 aa20.1■□□□□ 0.81
GTF2F2-201ENST00000340473 TRAPPC8Q9Y2L5 1435 aa20.08■□□□□ 0.81
GTF2F2-201ENST00000340473 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.8
GTF2F2-201ENST00000340473 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
GTF2F2-201ENST00000340473 RSPH4AQ5TD94 716 aa20.07■□□□□ 0.8
GTF2F2-201ENST00000340473 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
GTF2F2-201ENST00000340473 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
GTF2F2-201ENST00000340473 ADGBQ8N7X0 1667 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 TSPY4P0CV99 314 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 TSPY10P0CW01 314 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 AFAP1Q8N556 730 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
GTF2F2-201ENST00000340473 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
GTF2F2-201ENST00000340473 ADGRL2O95490 1459 aa20.02■□□□□ 0.8
GTF2F2-201ENST00000340473 MAST1Q9Y2H9 1570 aa20.01■□□□□ 0.79
GTF2F2-201ENST00000340473 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
GTF2F2-201ENST00000340473 NAIPQ13075 1403 aa20■□□□□ 0.79
GTF2F2-201ENST00000340473 POGZQ7Z3K3 1410 aa20■□□□□ 0.79
GTF2F2-201ENST00000340473 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
GTF2F2-201ENST00000340473 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
GTF2F2-201ENST00000340473 ANKRD30AQ9BXX3 1397 aa19.98■□□□□ 0.79
GTF2F2-201ENST00000340473 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
GTF2F2-201ENST00000340473 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
GTF2F2-201ENST00000340473 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
GTF2F2-201ENST00000340473 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
GTF2F2-201ENST00000340473 KDM5CP41229 1560 aa19.96■□□□□ 0.79
GTF2F2-201ENST00000340473 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
GTF2F2-201ENST00000340473 RAPGEF3O95398 923 aa19.96■□□□□ 0.79
GTF2F2-201ENST00000340473 INO80Q9ULG1 1556 aaPredicted RBP19.95■□□□□ 0.78
GTF2F2-201ENST00000340473 RICTORQ6R327 1708 aa19.95■□□□□ 0.78
GTF2F2-201ENST00000340473 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
GTF2F2-201ENST00000340473 FRMPD1Q5SYB0 1578 aa19.94■□□□□ 0.78
GTF2F2-201ENST00000340473 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
GTF2F2-201ENST00000340473 KDM6BO15054 1643 aa19.93■□□□□ 0.78
GTF2F2-201ENST00000340473 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
GTF2F2-201ENST00000340473 KIF15Q9NS87 1388 aa19.93■□□□□ 0.78
GTF2F2-201ENST00000340473 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
GTF2F2-201ENST00000340473 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
GTF2F2-201ENST00000340473 HECW2Q9P2P5 1572 aa19.9■□□□□ 0.78
GTF2F2-201ENST00000340473 MLH3Q9UHC1 1453 aa19.89■□□□□ 0.77
GTF2F2-201ENST00000340473 MYT1LQ9UL68 1186 aa19.88■□□□□ 0.77
GTF2F2-201ENST00000340473 ANKRD50Q9ULJ7 1429 aa19.87■□□□□ 0.77
GTF2F2-201ENST00000340473 HRCP23327 699 aa19.87■□□□□ 0.77
GTF2F2-201ENST00000340473 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
GTF2F2-201ENST00000340473 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
GTF2F2-201ENST00000340473 ABCA6Q8N139 1617 aa19.83■□□□□ 0.77
GTF2F2-201ENST00000340473 YEATS2Q9ULM3 1422 aa19.81■□□□□ 0.76
GTF2F2-201ENST00000340473 ERBINQ96RT1 1412 aa19.81■□□□□ 0.76
GTF2F2-201ENST00000340473 DIP2CQ9Y2E4 1556 aa19.8■□□□□ 0.76
GTF2F2-201ENST00000340473 MAGI2Q86UL8 1455 aa19.78■□□□□ 0.76
GTF2F2-201ENST00000340473 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
GTF2F2-201ENST00000340473 DHX29Q7Z478 1369 aaKnown RBP19.78■□□□□ 0.76
GTF2F2-201ENST00000340473 A2MP01023 1474 aa19.77■□□□□ 0.76
GTF2F2-201ENST00000340473 CCER1Q8TC90 406 aaPredicted RBP19.76■□□□□ 0.75
GTF2F2-201ENST00000340473 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
GTF2F2-201ENST00000340473 EIF2AK4Q9P2K8 1649 aaKnown RBP19.73■□□□□ 0.75
GTF2F2-201ENST00000340473 UNC13BO14795 1591 aa19.72■□□□□ 0.75
GTF2F2-201ENST00000340473 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
GTF2F2-201ENST00000340473 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
GTF2F2-201ENST00000340473 ATP10AO60312 1499 aa19.71■□□□□ 0.75
GTF2F2-201ENST00000340473 KIF3BO15066 747 aa19.7■□□□□ 0.74
GTF2F2-201ENST00000340473 PZPP20742 1482 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms