RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 UNC13AQ9UPW8 1703 aa17.16■□□□□ 0.34
LIN54-201ENST00000340417 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
LIN54-201ENST00000340417 FOXD1Q16676 465 aa17.15■□□□□ 0.34
LIN54-201ENST00000340417 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
LIN54-201ENST00000340417 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
LIN54-201ENST00000340417 TMF1P82094 1093 aa17.12■□□□□ 0.33
LIN54-201ENST00000340417 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
LIN54-201ENST00000340417 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
LIN54-201ENST00000340417 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
LIN54-201ENST00000340417 SETD5Q9C0A6 1442 aa17.1■□□□□ 0.33
LIN54-201ENST00000340417 CUX1P39880 1505 aa17.1■□□□□ 0.33
LIN54-201ENST00000340417 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
LIN54-201ENST00000340417 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
LIN54-201ENST00000340417 MRS2Q9HD23 443 aa17.08■□□□□ 0.33
LIN54-201ENST00000340417 NUTM2FA1L443 756 aa17.07■□□□□ 0.32
LIN54-201ENST00000340417 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
LIN54-201ENST00000340417 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
LIN54-201ENST00000340417 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIN54-201ENST00000340417 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
LIN54-201ENST00000340417 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
LIN54-201ENST00000340417 AFAP1Q8N556 730 aa17.02■□□□□ 0.31
LIN54-201ENST00000340417 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
LIN54-201ENST00000340417 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
LIN54-201ENST00000340417 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIN54-201ENST00000340417 POGZQ7Z3K3 1410 aa17.01■□□□□ 0.31
LIN54-201ENST00000340417 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
LIN54-201ENST00000340417 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
LIN54-201ENST00000340417 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
LIN54-201ENST00000340417 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
LIN54-201ENST00000340417 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
LIN54-201ENST00000340417 RAPGEF3O95398 923 aa16.97■□□□□ 0.31
LIN54-201ENST00000340417 ATF3P18847 181 aa16.97■□□□□ 0.31
LIN54-201ENST00000340417 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
LIN54-201ENST00000340417 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
LIN54-201ENST00000340417 EIF3AQ14152 1382 aaKnown RBP16.97■□□□□ 0.31
LIN54-201ENST00000340417 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
LIN54-201ENST00000340417 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
LIN54-201ENST00000340417 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
LIN54-201ENST00000340417 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LIN54-201ENST00000340417 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
LIN54-201ENST00000340417 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
LIN54-201ENST00000340417 ZNF608Q9ULD9 1512 aaPredicted RBP16.94■□□□□ 0.3
LIN54-201ENST00000340417 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
LIN54-201ENST00000340417 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
LIN54-201ENST00000340417 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
LIN54-201ENST00000340417 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
LIN54-201ENST00000340417 CCDC144AA2RUR9 1427 aa16.93■□□□□ 0.3
LIN54-201ENST00000340417 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
LIN54-201ENST00000340417 EVA1CP58658 441 aa16.92■□□□□ 0.3
LIN54-201ENST00000340417 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
LIN54-201ENST00000340417 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
LIN54-201ENST00000340417 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
LIN54-201ENST00000340417 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
LIN54-201ENST00000340417 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
LIN54-201ENST00000340417 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
LIN54-201ENST00000340417 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
LIN54-201ENST00000340417 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
LIN54-201ENST00000340417 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
LIN54-201ENST00000340417 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
LIN54-201ENST00000340417 AMPHP49418 695 aa16.85■□□□□ 0.29
LIN54-201ENST00000340417 PSME1Q06323 249 aa16.85■□□□□ 0.29
LIN54-201ENST00000340417 PROSER2Q86WR7 435 aaPredicted RBP16.85■□□□□ 0.29
LIN54-201ENST00000340417 IQGAP2Q13576 1575 aa16.84■□□□□ 0.29
LIN54-201ENST00000340417 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
LIN54-201ENST00000340417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.295e-6■■■□□ 15.5
LIN54-201ENST00000340417 PLEKHH2Q8IVE3 1493 aa16.83■□□□□ 0.28
LIN54-201ENST00000340417 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
LIN54-201ENST00000340417 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
LIN54-201ENST00000340417 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
LIN54-201ENST00000340417 ANKLE2Q86XL3 938 aa16.82■□□□□ 0.28
LIN54-201ENST00000340417 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
LIN54-201ENST00000340417 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
LIN54-201ENST00000340417 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
LIN54-201ENST00000340417 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
LIN54-201ENST00000340417 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
LIN54-201ENST00000340417 TROQ12816 1431 aaPredicted RBP16.78■□□□□ 0.28
LIN54-201ENST00000340417 CUL7Q14999 1698 aa16.77■□□□□ 0.28
LIN54-201ENST00000340417 HECW1Q76N89 1606 aa16.77■□□□□ 0.28
LIN54-201ENST00000340417 NCOA2Q15596 1464 aa16.77■□□□□ 0.28
LIN54-201ENST00000340417 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
LIN54-201ENST00000340417 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
LIN54-201ENST00000340417 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
LIN54-201ENST00000340417 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
LIN54-201ENST00000340417 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
LIN54-201ENST00000340417 KIF21BO75037 1637 aa16.74■□□□□ 0.27
LIN54-201ENST00000340417 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
LIN54-201ENST00000340417 MSH5O43196 834 aa16.73■□□□□ 0.27
LIN54-201ENST00000340417 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
LIN54-201ENST00000340417 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
LIN54-201ENST00000340417 FTSJ3Q8IY81 847 aaKnown RBP16.72■□□□□ 0.27
LIN54-201ENST00000340417 DHX57Q6P158 1386 aaKnown RBP16.71■□□□□ 0.27
LIN54-201ENST00000340417 COG3Q96JB2 828 aa16.71■□□□□ 0.27
LIN54-201ENST00000340417 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.27
LIN54-201ENST00000340417 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
LIN54-201ENST00000340417 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
LIN54-201ENST00000340417 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIN54-201ENST00000340417 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
LIN54-201ENST00000340417 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
LIN54-201ENST00000340417 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
LIN54-201ENST00000340417 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
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