RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 LRRC9Q6ZRR7 1453 aa22.37■■□□□ 1.17
CTSL-201ENST00000340342 PREX2Q70Z35 1606 aa22.37■■□□□ 1.17
CTSL-201ENST00000340342 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
CTSL-201ENST00000340342 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
CTSL-201ENST00000340342 ARHGAP5Q13017 1502 aa22.34■■□□□ 1.17
CTSL-201ENST00000340342 DENND4BO75064 1496 aaPredicted RBP22.34■■□□□ 1.17
CTSL-201ENST00000340342 APLP2Q06481 763 aa22.32■■□□□ 1.16
CTSL-201ENST00000340342 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
CTSL-201ENST00000340342 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
CTSL-201ENST00000340342 RICTORQ6R327 1708 aa22.3■■□□□ 1.16
CTSL-201ENST00000340342 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
CTSL-201ENST00000340342 CCNB3Q8WWL7 1395 aa22.29■■□□□ 1.16
CTSL-201ENST00000340342 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
CTSL-201ENST00000340342 FRMPD1Q5SYB0 1578 aa22.28■■□□□ 1.16
CTSL-201ENST00000340342 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
CTSL-201ENST00000340342 ITSN2Q9NZM3 1697 aa22.27■■□□□ 1.16
CTSL-201ENST00000340342 SAMD9LQ8IVG5 1584 aa22.23■■□□□ 1.15
CTSL-201ENST00000340342 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
CTSL-201ENST00000340342 MAGI2Q86UL8 1455 aa22.21■■□□□ 1.15
CTSL-201ENST00000340342 ABCC1P33527 1531 aa22.21■■□□□ 1.15
CTSL-201ENST00000340342 ZMYM4Q5VZL5 1548 aa22.21■■□□□ 1.15
CTSL-201ENST00000340342 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
CTSL-201ENST00000340342 CFDP1Q9UEE9 299 aaPredicted RBP22.2■■□□□ 1.14
CTSL-201ENST00000340342 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
CTSL-201ENST00000340342 ZNF518AQ6AHZ1 1483 aa22.17■■□□□ 1.14
CTSL-201ENST00000340342 AFAP1Q8N556 730 aa22.16■■□□□ 1.14
CTSL-201ENST00000340342 SYCP2Q9BX26 1530 aa22.16■■□□□ 1.14
CTSL-201ENST00000340342 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.14
CTSL-201ENST00000340342 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
CTSL-201ENST00000340342 ZFYVE16Q7Z3T8 1539 aa22.14■■□□□ 1.13
CTSL-201ENST00000340342 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
CTSL-201ENST00000340342 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
CTSL-201ENST00000340342 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
CTSL-201ENST00000340342 KDM5CP41229 1560 aa22.11■■□□□ 1.13
CTSL-201ENST00000340342 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
CTSL-201ENST00000340342 ARID4BQ4LE39 1312 aaPredicted RBP22.11■■□□□ 1.13
CTSL-201ENST00000340342 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
CTSL-201ENST00000340342 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
CTSL-201ENST00000340342 KIAA1107Q9UPP5 1409 aa22.1■■□□□ 1.13
CTSL-201ENST00000340342 HNRNPMP52272 730 aaKnown RBP eCLIP22.09■■□□□ 1.13
CTSL-201ENST00000340342 MYT1LQ9UL68 1186 aa22.08■■□□□ 1.13
CTSL-201ENST00000340342 ATP10AO60312 1499 aa22.07■■□□□ 1.12
CTSL-201ENST00000340342 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
CTSL-201ENST00000340342 HECW2Q9P2P5 1572 aa22.06■■□□□ 1.12
CTSL-201ENST00000340342 MIA2Q96PC5 1412 aa22.05■■□□□ 1.12
CTSL-201ENST00000340342 MBD5Q9P267 1494 aa22.04■■□□□ 1.12
CTSL-201ENST00000340342 PTPN23Q9H3S7 1636 aa22.04■■□□□ 1.12
CTSL-201ENST00000340342 BCORL1Q5H9F3 1711 aa22.04■■□□□ 1.12
CTSL-201ENST00000340342 FGD6Q6ZV73 1430 aa22.03■■□□□ 1.12
CTSL-201ENST00000340342 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
CTSL-201ENST00000340342 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
CTSL-201ENST00000340342 C9orf84Q5VXU9 1444 aa22.02■■□□□ 1.11
CTSL-201ENST00000340342 SPAG9O60271 1321 aaKnown RBP22■■□□□ 1.11
CTSL-201ENST00000340342 ABCA6Q8N139 1617 aa21.99■■□□□ 1.11
CTSL-201ENST00000340342 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
CTSL-201ENST00000340342 SIGLEC1Q9BZZ2 1709 aa21.99■■□□□ 1.11
CTSL-201ENST00000340342 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
CTSL-201ENST00000340342 INO80Q9ULG1 1556 aaPredicted RBP21.98■■□□□ 1.11
CTSL-201ENST00000340342 DIP2CQ9Y2E4 1556 aa21.98■■□□□ 1.11
CTSL-201ENST00000340342 CCDC141Q6ZP82 1450 aa21.97■■□□□ 1.11
CTSL-201ENST00000340342 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
CTSL-201ENST00000340342 REREQ9P2R6 1566 aa21.96■■□□□ 1.11
CTSL-201ENST00000340342 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
CTSL-201ENST00000340342 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
CTSL-201ENST00000340342 MLECQ14165 292 aa21.92■■□□□ 1.1
CTSL-201ENST00000340342 MADDQ8WXG6 1647 aa21.92■■□□□ 1.1
CTSL-201ENST00000340342 PTPRMP28827 1452 aa21.91■■□□□ 1.1
CTSL-201ENST00000340342 RTEL1-TNFRSF6BF6WH68 1400 aa21.9■■□□□ 1.1
CTSL-201ENST00000340342 DNMT1P26358 1616 aaKnown RBP21.9■■□□□ 1.1
CTSL-201ENST00000340342 AGLP35573 1532 aa21.9■■□□□ 1.1
CTSL-201ENST00000340342 FAM50AQ14320 339 aaKnown RBP21.89■■□□□ 1.09
CTSL-201ENST00000340342 ADGBQ8N7X0 1667 aa21.88■■□□□ 1.09
CTSL-201ENST00000340342 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
CTSL-201ENST00000340342 TSPY10P0CW01 314 aa21.87■■□□□ 1.09
CTSL-201ENST00000340342 ABCC5O15440 1437 aa21.86■■□□□ 1.09
CTSL-201ENST00000340342 MAST1Q9Y2H9 1570 aa21.86■■□□□ 1.09
CTSL-201ENST00000340342 RIMS1Q86UR5 1692 aaKnown RBP21.86■■□□□ 1.09
CTSL-201ENST00000340342 DAPK1P53355 1430 aa21.86■■□□□ 1.09
CTSL-201ENST00000340342 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
CTSL-201ENST00000340342 A2MP01023 1474 aa21.83■■□□□ 1.08
CTSL-201ENST00000340342 SHANK2Q9UPX8 1470 aa21.82■■□□□ 1.08
CTSL-201ENST00000340342 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
CTSL-201ENST00000340342 ESF1Q9H501 851 aaKnown RBP21.8■■□□□ 1.08
CTSL-201ENST00000340342 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
CTSL-201ENST00000340342 DHX29Q7Z478 1369 aaKnown RBP21.78■■□□□ 1.08
CTSL-201ENST00000340342 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
CTSL-201ENST00000340342 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
CTSL-201ENST00000340342 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
CTSL-201ENST00000340342 ITGAEP38570 1179 aa21.73■■□□□ 1.07
CTSL-201ENST00000340342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.73■■□□□ 1.073e-6■□□□□ 10.4
CTSL-201ENST00000340342 CNTLNQ9NXG0 1405 aa21.73■■□□□ 1.07
CTSL-201ENST00000340342 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
CTSL-201ENST00000340342 GGT6Q6P531 493 aa21.72■■□□□ 1.07
CTSL-201ENST00000340342 RRP7BPQ9NSQ0 103 aa21.71■■□□□ 1.07
CTSL-201ENST00000340342 KIF15Q9NS87 1388 aa21.7■■□□□ 1.07
CTSL-201ENST00000340342 SETD1BQ9UPS6 1966 aaKnown RBP21.7■■□□□ 1.06
CTSL-201ENST00000340342 CEBPAP49715 358 aaPredicted RBP21.7■■□□□ 1.06
CTSL-201ENST00000340342 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
CTSL-201ENST00000340342 KIF3BO15066 747 aa21.69■■□□□ 1.06
CTSL-201ENST00000340342 ANKRD30AQ9BXX3 1397 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms