RNA–Protein interactions for RNA: ENST00000340273.4

MMP13-202, Transcript of matrix metallopeptidase 13, humanhuman

TSL 1 (best) BASIC

Gene MMP13, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-202ENST00000340273 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
MMP13-202ENST00000340273 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
MMP13-202ENST00000340273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.46□□□□□ -0.42
MMP13-202ENST00000340273 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.42
MMP13-202ENST00000340273 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
MMP13-202ENST00000340273 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
MMP13-202ENST00000340273 ITGAEP38570 1179 aa12.41□□□□□ -0.42
MMP13-202ENST00000340273 ZCCHC11Q5TAX3 1644 aaKnown RBP12.41□□□□□ -0.42
MMP13-202ENST00000340273 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
MMP13-202ENST00000340273 ASXL2Q76L83 1435 aa12.41□□□□□ -0.42
MMP13-202ENST00000340273 FAM69CQ0P6D2 419 aa12.4□□□□□ -0.42
MMP13-202ENST00000340273 POTEHQ6S545 545 aa12.4□□□□□ -0.42
MMP13-202ENST00000340273 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.42
MMP13-202ENST00000340273 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.43
MMP13-202ENST00000340273 FGD6Q6ZV73 1430 aa12.39□□□□□ -0.43
MMP13-202ENST00000340273 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
MMP13-202ENST00000340273 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
MMP13-202ENST00000340273 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
MMP13-202ENST00000340273 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
MMP13-202ENST00000340273 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
MMP13-202ENST00000340273 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
MMP13-202ENST00000340273 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
MMP13-202ENST00000340273 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
MMP13-202ENST00000340273 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
MMP13-202ENST00000340273 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
MMP13-202ENST00000340273 HFM1A2PYH4 1435 aa12.31□□□□□ -0.44
MMP13-202ENST00000340273 PTPRKQ15262 1439 aa12.31□□□□□ -0.44
MMP13-202ENST00000340273 KIF14Q15058 1648 aa12.3□□□□□ -0.44
MMP13-202ENST00000340273 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
MMP13-202ENST00000340273 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
MMP13-202ENST00000340273 TCOF1Q13428 1488 aaKnown RBP12.3□□□□□ -0.44
MMP13-202ENST00000340273 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
MMP13-202ENST00000340273 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
MMP13-202ENST00000340273 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
MMP13-202ENST00000340273 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.44
MMP13-202ENST00000340273 ZNF644Q9H582 1327 aaPredicted RBP12.26□□□□□ -0.45
MMP13-202ENST00000340273 NAIPQ13075 1403 aa12.26□□□□□ -0.45
MMP13-202ENST00000340273 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
MMP13-202ENST00000340273 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
MMP13-202ENST00000340273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.45
MMP13-202ENST00000340273 HNRNPMP52272 730 aaKnown RBP eCLIP12.25□□□□□ -0.45
MMP13-202ENST00000340273 TTC37Q6PGP7 1564 aa12.23□□□□□ -0.45
MMP13-202ENST00000340273 AKNAQ7Z591 1439 aa12.23□□□□□ -0.45
MMP13-202ENST00000340273 GPATCH8Q9UKJ3 1502 aaKnown RBP12.22□□□□□ -0.45
MMP13-202ENST00000340273 TSPOAP1O95153 1857 aa12.22□□□□□ -0.45
MMP13-202ENST00000340273 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
MMP13-202ENST00000340273 PLCH2O75038 1416 aa12.21□□□□□ -0.45
MMP13-202ENST00000340273 DIP2BQ9P265 1576 aa12.21□□□□□ -0.45
MMP13-202ENST00000340273 KDM6BO15054 1643 aa12.21□□□□□ -0.46
MMP13-202ENST00000340273 PPP1R15AO75807 674 aaPredicted RBP12.21□□□□□ -0.46
MMP13-202ENST00000340273 FANCAO15360 1455 aa12.19□□□□□ -0.46
MMP13-202ENST00000340273 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
MMP13-202ENST00000340273 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
MMP13-202ENST00000340273 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
MMP13-202ENST00000340273 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
MMP13-202ENST00000340273 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
MMP13-202ENST00000340273 DENND4BO75064 1496 aaPredicted RBP12.17□□□□□ -0.46
MMP13-202ENST00000340273 GLI2P10070 1586 aa12.17□□□□□ -0.46
MMP13-202ENST00000340273 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
MMP13-202ENST00000340273 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
MMP13-202ENST00000340273 AFAP1Q8N556 730 aa12.16□□□□□ -0.46
MMP13-202ENST00000340273 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
MMP13-202ENST00000340273 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
MMP13-202ENST00000340273 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
MMP13-202ENST00000340273 CDC42BPAQ5VT25 1732 aa12.15□□□□□ -0.46
MMP13-202ENST00000340273 TEX14Q8IWB6 1497 aa12.15□□□□□ -0.46
MMP13-202ENST00000340273 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
MMP13-202ENST00000340273 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
MMP13-202ENST00000340273 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
MMP13-202ENST00000340273 SUPT16HQ9Y5B9 1047 aaKnown RBP12.14□□□□□ -0.47
MMP13-202ENST00000340273 PREX2Q70Z35 1606 aa12.13□□□□□ -0.47
MMP13-202ENST00000340273 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
MMP13-202ENST00000340273 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
MMP13-202ENST00000340273 RRP7BPQ9NSQ0 103 aa12.13□□□□□ -0.47
MMP13-202ENST00000340273 MAP3K4Q9Y6R4 1608 aa12.13□□□□□ -0.47
MMP13-202ENST00000340273 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
MMP13-202ENST00000340273 CDC42BPBQ9Y5S2 1711 aa12.13□□□□□ -0.47
MMP13-202ENST00000340273 SPAG9O60271 1321 aaKnown RBP12.12□□□□□ -0.47
MMP13-202ENST00000340273 CROCC2H7BZ55 1655 aa12.11□□□□□ -0.47
MMP13-202ENST00000340273 PLEKHH2Q8IVE3 1493 aa12.1□□□□□ -0.47
MMP13-202ENST00000340273 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
MMP13-202ENST00000340273 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
MMP13-202ENST00000340273 NEO1Q92859 1461 aa12.1□□□□□ -0.47
MMP13-202ENST00000340273 CCER2I3L3R5 266 aa12.09□□□□□ -0.47
MMP13-202ENST00000340273 RSPH4AQ5TD94 716 aa12.09□□□□□ -0.47
MMP13-202ENST00000340273 DAPK1P53355 1430 aa12.09□□□□□ -0.47
MMP13-202ENST00000340273 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
MMP13-202ENST00000340273 POLR1AO95602 1720 aaPredicted RBP12.09□□□□□ -0.47
MMP13-202ENST00000340273 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.47
MMP13-202ENST00000340273 ROCK1Q13464 1354 aa12.08□□□□□ -0.48
MMP13-202ENST00000340273 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
MMP13-202ENST00000340273 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
MMP13-202ENST00000340273 ABCC5O15440 1437 aa12.07□□□□□ -0.48
MMP13-202ENST00000340273 KIAA1107Q9UPP5 1409 aa12.06□□□□□ -0.48
MMP13-202ENST00000340273 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
MMP13-202ENST00000340273 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
MMP13-202ENST00000340273 ABCC1P33527 1531 aa12.05□□□□□ -0.48
MMP13-202ENST00000340273 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
MMP13-202ENST00000340273 C9orf84Q5VXU9 1444 aa12.04□□□□□ -0.48
MMP13-202ENST00000340273 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms