RNA–Protein interactions for RNA: ENST00000339360.9

RAP1GDS1-202, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAP1GDS1, Length 2,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-202ENST00000339360 ARAP3Q8WWN8 1544 aa9.38□□□□□ -0.91
RAP1GDS1-202ENST00000339360 CDC42BPBQ9Y5S2 1711 aa9.36□□□□□ -0.91
RAP1GDS1-202ENST00000339360 APLP2Q06481 763 aa9.36□□□□□ -0.91
RAP1GDS1-202ENST00000339360 PHLDB1Q86UU1 1377 aa9.36□□□□□ -0.91
RAP1GDS1-202ENST00000339360 RICTORQ6R327 1708 aa9.35□□□□□ -0.91
RAP1GDS1-202ENST00000339360 ADGRL1O94910 1474 aa9.35□□□□□ -0.91
RAP1GDS1-202ENST00000339360 PLCH2O75038 1416 aa9.32□□□□□ -0.92
RAP1GDS1-202ENST00000339360 DENND4BO75064 1496 aaPredicted RBP9.32□□□□□ -0.92
RAP1GDS1-202ENST00000339360 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
RAP1GDS1-202ENST00000339360 AKNAQ7Z591 1439 aa9.32□□□□□ -0.92
RAP1GDS1-202ENST00000339360 CCNB3Q8WWL7 1395 aa9.32□□□□□ -0.92
RAP1GDS1-202ENST00000339360 ABCC1P33527 1531 aa9.31□□□□□ -0.92
RAP1GDS1-202ENST00000339360 ARHGEF40Q8TER5 1519 aa9.31□□□□□ -0.92
RAP1GDS1-202ENST00000339360 FRMPD1Q5SYB0 1578 aa9.31□□□□□ -0.92
RAP1GDS1-202ENST00000339360 HECW2Q9P2P5 1572 aa9.3□□□□□ -0.92
RAP1GDS1-202ENST00000339360 ZMYM4Q5VZL5 1548 aa9.3□□□□□ -0.92
RAP1GDS1-202ENST00000339360 EFCAB2Q5VUJ9 269 aa9.3□□□□□ -0.92
RAP1GDS1-202ENST00000339360 ZNF518AQ6AHZ1 1483 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 LRRC9Q6ZRR7 1453 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 ZFYVE16Q7Z3T8 1539 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 POGZQ7Z3K3 1410 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 PLEKHH2Q8IVE3 1493 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 SAMD9LQ8IVG5 1584 aa9.29□□□□□ -0.92
RAP1GDS1-202ENST00000339360 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
RAP1GDS1-202ENST00000339360 SYCP2Q9BX26 1530 aa9.28□□□□□ -0.92
RAP1GDS1-202ENST00000339360 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
RAP1GDS1-202ENST00000339360 SCAPERQ9BY12 1400 aa9.27□□□□□ -0.92
RAP1GDS1-202ENST00000339360 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
RAP1GDS1-202ENST00000339360 GPATCH8Q9UKJ3 1502 aaKnown RBP9.26□□□□□ -0.93
RAP1GDS1-202ENST00000339360 KDM5CP41229 1560 aa9.26□□□□□ -0.93
RAP1GDS1-202ENST00000339360 ZNF777Q9ULD5 760 aaPredicted RBP9.26□□□□□ -0.93
RAP1GDS1-202ENST00000339360 MAGI2Q86UL8 1455 aa9.25□□□□□ -0.93
RAP1GDS1-202ENST00000339360 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
RAP1GDS1-202ENST00000339360 RAPGEF3O95398 923 aa9.24□□□□□ -0.93
RAP1GDS1-202ENST00000339360 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
RAP1GDS1-202ENST00000339360 ABCA6Q8N139 1617 aa9.23□□□□□ -0.93
RAP1GDS1-202ENST00000339360 ADGBQ8N7X0 1667 aa9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 INO80Q9ULG1 1556 aaPredicted RBP9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 FER1L4A9Z1Z3 1794 aa9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 DIP2CQ9Y2E4 1556 aa9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 ATP7AQ04656 1500 aa9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 BCORL1Q5H9F3 1711 aa9.22□□□□□ -0.93
RAP1GDS1-202ENST00000339360 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.93
RAP1GDS1-202ENST00000339360 C9orf84Q5VXU9 1444 aa9.21□□□□□ -0.93
RAP1GDS1-202ENST00000339360 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
RAP1GDS1-202ENST00000339360 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
RAP1GDS1-202ENST00000339360 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.93
RAP1GDS1-202ENST00000339360 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.94
RAP1GDS1-202ENST00000339360 KIDINS220Q9ULH0 1771 aa9.21□□□□□ -0.94
RAP1GDS1-202ENST00000339360 KIAA1107Q9UPP5 1409 aa9.2□□□□□ -0.94
RAP1GDS1-202ENST00000339360 ARHGEF5Q12774 1597 aa9.2□□□□□ -0.94
RAP1GDS1-202ENST00000339360 MIA2Q96PC5 1412 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 REREQ9P2R6 1566 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 MLH3Q9UHC1 1453 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 YEATS2Q9ULM3 1422 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 RIMS1Q86UR5 1692 aaKnown RBP9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 ARHGEF12Q9NZN5 1544 aa9.19□□□□□ -0.94
RAP1GDS1-202ENST00000339360 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
RAP1GDS1-202ENST00000339360 KANK4Q5T7N3 995 aaPredicted RBP9.17□□□□□ -0.94
RAP1GDS1-202ENST00000339360 ATP10AO60312 1499 aa9.17□□□□□ -0.94
RAP1GDS1-202ENST00000339360 SPAG9O60271 1321 aaKnown RBP9.17□□□□□ -0.94
RAP1GDS1-202ENST00000339360 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
RAP1GDS1-202ENST00000339360 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
RAP1GDS1-202ENST00000339360 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
RAP1GDS1-202ENST00000339360 SIGLEC1Q9BZZ2 1709 aa9.16□□□□□ -0.94
RAP1GDS1-202ENST00000339360 AFAP1Q8N556 730 aa9.16□□□□□ -0.94
RAP1GDS1-202ENST00000339360 MAST1Q9Y2H9 1570 aa9.15□□□□□ -0.94
RAP1GDS1-202ENST00000339360 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
RAP1GDS1-202ENST00000339360 PLXNC1O60486 1568 aa9.15□□□□□ -0.95
RAP1GDS1-202ENST00000339360 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
RAP1GDS1-202ENST00000339360 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
RAP1GDS1-202ENST00000339360 TSPY4P0CV99 314 aa9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 TSPY10P0CW01 314 aa9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 EIF2AK4Q9P2K8 1649 aaKnown RBP9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 RTEL1-TNFRSF6BF6WH68 1400 aa9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 A2MP01023 1474 aa9.13□□□□□ -0.95
RAP1GDS1-202ENST00000339360 AGLP35573 1532 aa9.12□□□□□ -0.95
RAP1GDS1-202ENST00000339360 ZNF644Q9H582 1327 aaPredicted RBP9.12□□□□□ -0.95
RAP1GDS1-202ENST00000339360 TCOF1Q13428 1488 aaKnown RBP9.12□□□□□ -0.95
RAP1GDS1-202ENST00000339360 MROH2AA6NES4 1674 aa9.11□□□□□ -0.95
RAP1GDS1-202ENST00000339360 MLECQ14165 292 aa9.11□□□□□ -0.95
RAP1GDS1-202ENST00000339360 DAPK1P53355 1430 aa9.1□□□□□ -0.95
RAP1GDS1-202ENST00000339360 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
RAP1GDS1-202ENST00000339360 ZC3H13Q5T200 1668 aaKnown RBP9.1□□□□□ -0.95
RAP1GDS1-202ENST00000339360 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
RAP1GDS1-202ENST00000339360 DUOX2Q9NRD8 1548 aa9.09□□□□□ -0.95
RAP1GDS1-202ENST00000339360 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
RAP1GDS1-202ENST00000339360 PTPRMP28827 1452 aa9.09□□□□□ -0.95
RAP1GDS1-202ENST00000339360 C3P01024 1663 aa9.08□□□□□ -0.96
RAP1GDS1-202ENST00000339360 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
RAP1GDS1-202ENST00000339360 PREX1Q8TCU6 1659 aa9.08□□□□□ -0.96
RAP1GDS1-202ENST00000339360 CNTLNQ9NXG0 1405 aa9.08□□□□□ -0.96
RAP1GDS1-202ENST00000339360 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
RAP1GDS1-202ENST00000339360 RNF17Q9BXT8 1623 aaKnown RBP9.07□□□□□ -0.96
RAP1GDS1-202ENST00000339360 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
RAP1GDS1-202ENST00000339360 PLPPR3Q6T4P5 718 aa9.06□□□□□ -0.96
RAP1GDS1-202ENST00000339360 ANKRD30AQ9BXX3 1397 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms