RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
LRP1-202ENST00000338962 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
LRP1-202ENST00000338962 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
LRP1-202ENST00000338962 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
LRP1-202ENST00000338962 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
LRP1-202ENST00000338962 TTC37Q6PGP7 1564 aa16.35■□□□□ 0.21
LRP1-202ENST00000338962 ARAP3Q8WWN8 1544 aa16.33■□□□□ 0.2
LRP1-202ENST00000338962 RAB3GAP2Q9H2M9 1393 aa16.33■□□□□ 0.2
LRP1-202ENST00000338962 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
LRP1-202ENST00000338962 MYOM3Q5VTT5 1437 aa16.31■□□□□ 0.2
LRP1-202ENST00000338962 SETD5Q9C0A6 1442 aa16.31■□□□□ 0.2
LRP1-202ENST00000338962 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
LRP1-202ENST00000338962 TEX14Q8IWB6 1497 aa16.29■□□□□ 0.2
LRP1-202ENST00000338962 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
LRP1-202ENST00000338962 FANCAO15360 1455 aa16.28■□□□□ 0.2
LRP1-202ENST00000338962 NEO1Q92859 1461 aa16.28■□□□□ 0.2
LRP1-202ENST00000338962 PPRC1Q5VV67 1664 aaKnown RBP16.26■□□□□ 0.19
LRP1-202ENST00000338962 PREX2Q70Z35 1606 aa16.25■□□□□ 0.19
LRP1-202ENST00000338962 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
LRP1-202ENST00000338962 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
LRP1-202ENST00000338962 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
LRP1-202ENST00000338962 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
LRP1-202ENST00000338962 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
LRP1-202ENST00000338962 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
LRP1-202ENST00000338962 CDC42BPBQ9Y5S2 1711 aa16.22■□□□□ 0.19
LRP1-202ENST00000338962 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
LRP1-202ENST00000338962 ZNF777Q9ULD5 760 aaPredicted RBP16.21■□□□□ 0.19
LRP1-202ENST00000338962 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
LRP1-202ENST00000338962 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
LRP1-202ENST00000338962 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
LRP1-202ENST00000338962 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
LRP1-202ENST00000338962 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
LRP1-202ENST00000338962 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
LRP1-202ENST00000338962 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
LRP1-202ENST00000338962 TCOF1Q13428 1488 aaKnown RBP16.18■□□□□ 0.18
LRP1-202ENST00000338962 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
LRP1-202ENST00000338962 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
LRP1-202ENST00000338962 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
LRP1-202ENST00000338962 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
LRP1-202ENST00000338962 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
LRP1-202ENST00000338962 HFM1A2PYH4 1435 aa16.17■□□□□ 0.18
LRP1-202ENST00000338962 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
LRP1-202ENST00000338962 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
LRP1-202ENST00000338962 ARHGEF12Q9NZN5 1544 aa16.17■□□□□ 0.18
LRP1-202ENST00000338962 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
LRP1-202ENST00000338962 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
LRP1-202ENST00000338962 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
LRP1-202ENST00000338962 ABCC1P33527 1531 aa16.16■□□□□ 0.18
LRP1-202ENST00000338962 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
LRP1-202ENST00000338962 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
LRP1-202ENST00000338962 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
LRP1-202ENST00000338962 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
LRP1-202ENST00000338962 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
LRP1-202ENST00000338962 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
LRP1-202ENST00000338962 NAIPQ13075 1403 aa16.11■□□□□ 0.17
LRP1-202ENST00000338962 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
LRP1-202ENST00000338962 ABCC5O15440 1437 aa16.09■□□□□ 0.17
LRP1-202ENST00000338962 CCDC141Q6ZP82 1450 aa16.08■□□□□ 0.17
LRP1-202ENST00000338962 KDM6BO15054 1643 aa16.08■□□□□ 0.16
LRP1-202ENST00000338962 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
LRP1-202ENST00000338962 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
LRP1-202ENST00000338962 KDM5CP41229 1560 aa16.07■□□□□ 0.16
LRP1-202ENST00000338962 MLH3Q9UHC1 1453 aa16.06■□□□□ 0.16
LRP1-202ENST00000338962 DAPK1P53355 1430 aa16.06■□□□□ 0.16
LRP1-202ENST00000338962 FRMPD1Q5SYB0 1578 aa16.06■□□□□ 0.16
LRP1-202ENST00000338962 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
LRP1-202ENST00000338962 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
LRP1-202ENST00000338962 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
LRP1-202ENST00000338962 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
LRP1-202ENST00000338962 ZMYM4Q5VZL5 1548 aa16.05■□□□□ 0.16
LRP1-202ENST00000338962 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
LRP1-202ENST00000338962 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
LRP1-202ENST00000338962 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
LRP1-202ENST00000338962 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
LRP1-202ENST00000338962 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
LRP1-202ENST00000338962 NEUROD1Q13562 356 aa16.02■□□□□ 0.15
LRP1-202ENST00000338962 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.15
LRP1-202ENST00000338962 C9orf84Q5VXU9 1444 aa16.01■□□□□ 0.15
LRP1-202ENST00000338962 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
LRP1-202ENST00000338962 MAST1Q9Y2H9 1570 aa15.99■□□□□ 0.15
LRP1-202ENST00000338962 ROCK1Q13464 1354 aa15.99■□□□□ 0.15
LRP1-202ENST00000338962 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
LRP1-202ENST00000338962 NCOA1Q15788 1441 aa15.98■□□□□ 0.15
LRP1-202ENST00000338962 ZFYVE16Q7Z3T8 1539 aa15.98■□□□□ 0.15
LRP1-202ENST00000338962 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
LRP1-202ENST00000338962 ATP7AQ04656 1500 aa15.97■□□□□ 0.15
LRP1-202ENST00000338962 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
LRP1-202ENST00000338962 INO80Q9ULG1 1556 aaPredicted RBP15.97■□□□□ 0.15
LRP1-202ENST00000338962 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
LRP1-202ENST00000338962 ANKRD30AQ9BXX3 1397 aa15.96■□□□□ 0.15
LRP1-202ENST00000338962 ATP10AO60312 1499 aa15.95■□□□□ 0.14
LRP1-202ENST00000338962 KIDINS220Q9ULH0 1771 aa15.95■□□□□ 0.14
LRP1-202ENST00000338962 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
LRP1-202ENST00000338962 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
LRP1-202ENST00000338962 DHX29Q7Z478 1369 aaKnown RBP15.93■□□□□ 0.14
LRP1-202ENST00000338962 CROCC2H7BZ55 1655 aa15.93■□□□□ 0.14
LRP1-202ENST00000338962 ARHGEF40Q8TER5 1519 aa15.92■□□□□ 0.14
LRP1-202ENST00000338962 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
LRP1-202ENST00000338962 KIF15Q9NS87 1388 aa15.92■□□□□ 0.14
LRP1-202ENST00000338962 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms