RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CAMSAP2Q08AD1 1489 aa14.62□□□□□ -0.07
ARHGEF3-202ENST00000338458 KDM6BO15054 1643 aa14.61□□□□□ -0.07
ARHGEF3-202ENST00000338458 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
ARHGEF3-202ENST00000338458 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
ARHGEF3-202ENST00000338458 HIRIP3Q9BW71 556 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF3-202ENST00000338458 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 ABCC10Q5T3U5 1492 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 DNMT1P26358 1616 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 ITSN2Q9NZM3 1697 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 ABCC2Q92887 1545 aa14.56□□□□□ -0.08
ARHGEF3-202ENST00000338458 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
ARHGEF3-202ENST00000338458 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
ARHGEF3-202ENST00000338458 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
ARHGEF3-202ENST00000338458 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
ARHGEF3-202ENST00000338458 AKNAQ7Z591 1439 aa14.53□□□□□ -0.08
ARHGEF3-202ENST00000338458 GCC2Q8IWJ2 1684 aa14.51□□□□□ -0.09
ARHGEF3-202ENST00000338458 NCOA1Q15788 1441 aa14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 MIER1Q8N108 512 aa14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 ROCK1Q13464 1354 aa14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
ARHGEF3-202ENST00000338458 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
ARHGEF3-202ENST00000338458 C9orf84Q5VXU9 1444 aa14.48□□□□□ -0.09
ARHGEF3-202ENST00000338458 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
ARHGEF3-202ENST00000338458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.48□□□□□ -0.092e-6■■■■■ 51.7
ARHGEF3-202ENST00000338458 YTHDC1Q96MU7 727 aaKnown RBP14.47□□□□□ -0.09
ARHGEF3-202ENST00000338458 DENND4BO75064 1496 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF3-202ENST00000338458 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.1
ARHGEF3-202ENST00000338458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.14e-7■■□□□ 12.8
ARHGEF3-202ENST00000338458 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
ARHGEF3-202ENST00000338458 ANKRD50Q9ULJ7 1429 aa14.45□□□□□ -0.1
ARHGEF3-202ENST00000338458 NPM1P06748 294 aaKnown RBP eCLIP14.44□□□□□ -0.1
ARHGEF3-202ENST00000338458 SAMD9LQ8IVG5 1584 aa14.44□□□□□ -0.1
ARHGEF3-202ENST00000338458 PKD2Q13563 968 aa14.44□□□□□ -0.1
ARHGEF3-202ENST00000338458 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
ARHGEF3-202ENST00000338458 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
ARHGEF3-202ENST00000338458 KDM5BQ9UGL1 1544 aa14.43□□□□□ -0.1
ARHGEF3-202ENST00000338458 NUP155O75694 1391 aa14.43□□□□□ -0.1
ARHGEF3-202ENST00000338458 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
ARHGEF3-202ENST00000338458 TIMELESSQ9UNS1 1208 aa14.42□□□□□ -0.1
ARHGEF3-202ENST00000338458 MBD5Q9P267 1494 aa14.42□□□□□ -0.1
ARHGEF3-202ENST00000338458 PREX2Q70Z35 1606 aa14.42□□□□□ -0.1
ARHGEF3-202ENST00000338458 L3MBTL2Q969R5 705 aa14.41□□□□□ -0.1
ARHGEF3-202ENST00000338458 UHRF1BP1LA0JNW5 1464 aa14.41□□□□□ -0.1
ARHGEF3-202ENST00000338458 AFAP1Q8N556 730 aa14.4□□□□□ -0.1
ARHGEF3-202ENST00000338458 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
ARHGEF3-202ENST00000338458 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
ARHGEF3-202ENST00000338458 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
ARHGEF3-202ENST00000338458 ADGBQ8N7X0 1667 aa14.4□□□□□ -0.1
ARHGEF3-202ENST00000338458 DDX10Q13206 875 aaKnown RBP14.39□□□□□ -0.11
ARHGEF3-202ENST00000338458 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
ARHGEF3-202ENST00000338458 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
ARHGEF3-202ENST00000338458 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
ARHGEF3-202ENST00000338458 PLCH2O75038 1416 aa14.37□□□□□ -0.11
ARHGEF3-202ENST00000338458 PZPP20742 1482 aa14.37□□□□□ -0.11
ARHGEF3-202ENST00000338458 ANKRD30BQ9BXX2 1392 aa14.37□□□□□ -0.11
ARHGEF3-202ENST00000338458 ARHGEF12Q9NZN5 1544 aa14.37□□□□□ -0.11
ARHGEF3-202ENST00000338458 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
ARHGEF3-202ENST00000338458 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
ARHGEF3-202ENST00000338458 WDR7Q9Y4E6 1490 aa14.36□□□□□ -0.11
ARHGEF3-202ENST00000338458 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
ARHGEF3-202ENST00000338458 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
ARHGEF3-202ENST00000338458 ARHGEF5Q12774 1597 aa14.33□□□□□ -0.11
ARHGEF3-202ENST00000338458 SPAG9O60271 1321 aaKnown RBP14.32□□□□□ -0.12
ARHGEF3-202ENST00000338458 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
ARHGEF3-202ENST00000338458 NBPF8Q3BBV2 869 aa14.31□□□□□ -0.12
ARHGEF3-202ENST00000338458 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
ARHGEF3-202ENST00000338458 PLEKHH2Q8IVE3 1493 aa14.3□□□□□ -0.12
ARHGEF3-202ENST00000338458 FANCAO15360 1455 aa14.29□□□□□ -0.12
ARHGEF3-202ENST00000338458 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
ARHGEF3-202ENST00000338458 RPRD2Q5VT52 1461 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-202ENST00000338458 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
ARHGEF3-202ENST00000338458 RGL3Q3MIN7 710 aa14.28□□□□□ -0.12
ARHGEF3-202ENST00000338458 SCAPERQ9BY12 1400 aa14.27□□□□□ -0.13
ARHGEF3-202ENST00000338458 ABCC1P33527 1531 aa14.26□□□□□ -0.13
ARHGEF3-202ENST00000338458 EIF4G2P78344 907 aaKnown RBP eCLIP14.24□□□□□ -0.13
ARHGEF3-202ENST00000338458 ADGRL1O94910 1474 aa14.24□□□□□ -0.13
ARHGEF3-202ENST00000338458 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
ARHGEF3-202ENST00000338458 KIF3BO15066 747 aa14.23□□□□□ -0.13
ARHGEF3-202ENST00000338458 POLR3GLQ9BT43 218 aa14.23□□□□□ -0.13
ARHGEF3-202ENST00000338458 FAM135AQ9P2D6 1515 aa14.22□□□□□ -0.13
ARHGEF3-202ENST00000338458 CD109Q6YHK3 1445 aa14.22□□□□□ -0.13
ARHGEF3-202ENST00000338458 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
ARHGEF3-202ENST00000338458 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
ARHGEF3-202ENST00000338458 ABCA9Q8IUA7 1624 aa14.2□□□□□ -0.14
ARHGEF3-202ENST00000338458 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
ARHGEF3-202ENST00000338458 CNGB1Q14028 1251 aaPredicted RBP14.2□□□□□ -0.14
ARHGEF3-202ENST00000338458 MAST1Q9Y2H9 1570 aa14.19□□□□□ -0.14
ARHGEF3-202ENST00000338458 DUOX2Q9NRD8 1548 aa14.19□□□□□ -0.14
ARHGEF3-202ENST00000338458 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
ARHGEF3-202ENST00000338458 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
ARHGEF3-202ENST00000338458 PLXNC1O60486 1568 aa14.16□□□□□ -0.14
ARHGEF3-202ENST00000338458 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
ARHGEF3-202ENST00000338458 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
ARHGEF3-202ENST00000338458 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
ARHGEF3-202ENST00000338458 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
ARHGEF3-202ENST00000338458 GGT6Q6P531 493 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms