RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
HMG20A-201ENST00000336216 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
HMG20A-201ENST00000336216 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
HMG20A-201ENST00000336216 HSPA5P11021 654 aaKnown RBP8.69□□□□□ -1.02
HMG20A-201ENST00000336216 TNNT2P45379 298 aaPredicted RBP8.69□□□□□ -1.02
HMG20A-201ENST00000336216 CARMIL2Q6F5E8 1435 aa8.69□□□□□ -1.02
HMG20A-201ENST00000336216 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMG20A-201ENST00000336216 MPHOSPH9Q99550 1183 aa8.69□□□□□ -1.02
HMG20A-201ENST00000336216 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
HMG20A-201ENST00000336216 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
HMG20A-201ENST00000336216 PPP1R15AO75807 674 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-201ENST00000336216 CC2D1BQ5T0F9 858 aaKnown RBP8.68□□□□□ -1.02
HMG20A-201ENST00000336216 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
HMG20A-201ENST00000336216 IQGAP2Q13576 1575 aa8.68□□□□□ -1.02
HMG20A-201ENST00000336216 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
HMG20A-201ENST00000336216 CASKIN1Q8WXD9 1431 aa8.68□□□□□ -1.02
HMG20A-201ENST00000336216 FYCO1Q9BQS8 1478 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 GRIN2AQ12879 1464 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 KIAA0586Q9BVV6 1533 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 CCER2I3L3R5 266 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
HMG20A-201ENST00000336216 ZNF644Q9H582 1327 aaPredicted RBP8.67□□□□□ -1.02
HMG20A-201ENST00000336216 JPH4Q96JJ6 628 aa8.67□□□□□ -1.02
HMG20A-201ENST00000336216 LAS1LQ9Y4W2 734 aaKnown RBP8.67□□□□□ -1.02
HMG20A-201ENST00000336216 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
HMG20A-201ENST00000336216 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
HMG20A-201ENST00000336216 SAFB2Q14151 953 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMG20A-201ENST00000336216 WDR43Q15061 677 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMG20A-201ENST00000336216 TIAM1Q13009 1591 aa8.64□□□□□ -1.03
HMG20A-201ENST00000336216 MLECQ14165 292 aa8.64□□□□□ -1.03
HMG20A-201ENST00000336216 GGT6Q6P531 493 aa8.64□□□□□ -1.03
HMG20A-201ENST00000336216 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-201ENST00000336216 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
HMG20A-201ENST00000336216 CCDC18Q5T9S5 1454 aa8.63□□□□□ -1.03
HMG20A-201ENST00000336216 LRRC9Q6ZRR7 1453 aa8.63□□□□□ -1.03
HMG20A-201ENST00000336216 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-201ENST00000336216 NUP155O75694 1391 aa8.61□□□□□ -1.03
HMG20A-201ENST00000336216 PHLDB1Q86UU1 1377 aa8.61□□□□□ -1.03
HMG20A-201ENST00000336216 NEFMP07197 916 aa8.61□□□□□ -1.03
HMG20A-201ENST00000336216 UGGT2Q9NYU1 1516 aa8.6□□□□□ -1.03
HMG20A-201ENST00000336216 SAMD9Q5K651 1589 aa8.6□□□□□ -1.03
HMG20A-201ENST00000336216 HECW1Q76N89 1606 aa8.59□□□□□ -1.03
HMG20A-201ENST00000336216 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
HMG20A-201ENST00000336216 RRBP1Q9P2E9 1410 aaKnown RBP8.59□□□□□ -1.03
HMG20A-201ENST00000336216 PAK3O75914 559 aaPredicted RBP8.59□□□□□ -1.03
HMG20A-201ENST00000336216 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
HMG20A-201ENST00000336216 ARXQ96QS3 562 aa8.58□□□□□ -1.04
HMG20A-201ENST00000336216 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
HMG20A-201ENST00000336216 CCDC184Q52MB2 194 aa8.57□□□□□ -1.04
HMG20A-201ENST00000336216 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
HMG20A-201ENST00000336216 LRRIQ1Q96JM4 1722 aa8.57□□□□□ -1.04
HMG20A-201ENST00000336216 STK26Q9P289 416 aa8.57□□□□□ -1.04
HMG20A-201ENST00000336216 NUP160Q12769 1436 aa8.57□□□□□ -1.04
HMG20A-201ENST00000336216 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
HMG20A-201ENST00000336216 EHBP1L1Q8N3D4 1523 aa8.56□□□□□ -1.04
HMG20A-201ENST00000336216 ZBTB7CA1YPR0 619 aa8.56□□□□□ -1.04
HMG20A-201ENST00000336216 KIF3BO15066 747 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 SOX12O15370 315 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 PTPRGP23470 1445 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 KIAA0556O60303 1618 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
HMG20A-201ENST00000336216 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-201ENST00000336216 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
HMG20A-201ENST00000336216 EPRSP07814 1512 aaKnown RBP8.53□□□□□ -1.04
HMG20A-201ENST00000336216 CEP170Q5SW79 1584 aa8.53□□□□□ -1.04
HMG20A-201ENST00000336216 NCOA2Q15596 1464 aa8.52□□□□□ -1.04
HMG20A-201ENST00000336216 MYOM3Q5VTT5 1437 aa8.52□□□□□ -1.05
HMG20A-201ENST00000336216 FRAT1Q92837 279 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-201ENST00000336216 SUPT6HQ7KZ85 1726 aaKnown RBP8.52□□□□□ -1.05
HMG20A-201ENST00000336216 FGD6Q6ZV73 1430 aa8.52□□□□□ -1.05
HMG20A-201ENST00000336216 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
HMG20A-201ENST00000336216 IPO9Q96P70 1041 aaKnown RBP8.51□□□□□ -1.05
HMG20A-201ENST00000336216 DISP1Q96F81 1524 aa8.51□□□□□ -1.05
HMG20A-201ENST00000336216 EFCAB2Q5VUJ9 269 aa8.51□□□□□ -1.05
HMG20A-201ENST00000336216 POGKQ9P215 609 aa8.51□□□□□ -1.05
HMG20A-201ENST00000336216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
HMG20A-201ENST00000336216 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
HMG20A-201ENST00000336216 RGS3P49796 1198 aa8.51□□□□□ -1.05
HMG20A-201ENST00000336216 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
HMG20A-201ENST00000336216 MAGI3Q5TCQ9 1506 aa8.5□□□□□ -1.05
HMG20A-201ENST00000336216 PRKCSHP14314 528 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-201ENST00000336216 TMF1P82094 1093 aa8.5□□□□□ -1.05
HMG20A-201ENST00000336216 PRKRIP1Q9H875 184 aaPredicted RBP8.5□□□□□ -1.05
HMG20A-201ENST00000336216 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
HMG20A-201ENST00000336216 WASHC2AQ641Q2 1341 aa8.5□□□□□ -1.05
HMG20A-201ENST00000336216 ANKRD30AQ9BXX3 1397 aa8.49□□□□□ -1.05
HMG20A-201ENST00000336216 ROCK2O75116 1388 aaKnown RBP8.49□□□□□ -1.05
HMG20A-201ENST00000336216 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
HMG20A-201ENST00000336216 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
HMG20A-201ENST00000336216 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
HMG20A-201ENST00000336216 NUTM2FA1L443 756 aa8.48□□□□□ -1.05
HMG20A-201ENST00000336216 TROQ12816 1431 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-201ENST00000336216 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-201ENST00000336216 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 PLB1Q6P1J6 1458 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 MIA2Q96PC5 1412 aa8.47□□□□□ -1.05
HMG20A-201ENST00000336216 TRHP20396 242 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-201ENST00000336216 ERICH6BQ5W0A0 696 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms