RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 RCAN3Q9UKA8 241 aa20.47■□□□□ 0.87
TPCN1-201ENST00000335509 GGT6Q6P531 493 aa20.47■□□□□ 0.87
TPCN1-201ENST00000335509 OS9Q13438 667 aaPredicted RBP20.46■□□□□ 0.87
TPCN1-201ENST00000335509 L3MBTL2Q969R5 705 aa20.45■□□□□ 0.86
TPCN1-201ENST00000335509 CDK11BP21127 795 aaKnown RBP20.45■□□□□ 0.86
TPCN1-201ENST00000335509 MLECQ14165 292 aa20.45■□□□□ 0.86
TPCN1-201ENST00000335509 KTN1Q86UP2 1357 aaKnown RBP20.43■□□□□ 0.86
TPCN1-201ENST00000335509 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
TPCN1-201ENST00000335509 STK26Q9P289 416 aa20.43■□□□□ 0.86
TPCN1-201ENST00000335509 KCNJ4P48050 445 aa20.43■□□□□ 0.86
TPCN1-201ENST00000335509 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
TPCN1-201ENST00000335509 FGD1P98174 961 aa20.42■□□□□ 0.86
TPCN1-201ENST00000335509 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
TPCN1-201ENST00000335509 NUP155O75694 1391 aa20.42■□□□□ 0.86
TPCN1-201ENST00000335509 HSCBQ8IWL3 235 aa20.42■□□□□ 0.86
TPCN1-201ENST00000335509 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
TPCN1-201ENST00000335509 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
TPCN1-201ENST00000335509 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
TPCN1-201ENST00000335509 KANK1Q14678 1352 aa20.39■□□□□ 0.85
TPCN1-201ENST00000335509 APBB1O00213 710 aa20.39■□□□□ 0.85
TPCN1-201ENST00000335509 SLKQ9H2G2 1235 aaPredicted RBP20.36■□□□□ 0.85
TPCN1-201ENST00000335509 RALBP1Q15311 655 aa20.35■□□□□ 0.85
TPCN1-201ENST00000335509 ROCK2O75116 1388 aaKnown RBP20.35■□□□□ 0.85
TPCN1-201ENST00000335509 NAP1L2Q9ULW6 460 aaPredicted RBP20.35■□□□□ 0.85
TPCN1-201ENST00000335509 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
TPCN1-201ENST00000335509 FMN1Q68DA7 1419 aa20.3■□□□□ 0.84
TPCN1-201ENST00000335509 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
TPCN1-201ENST00000335509 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
TPCN1-201ENST00000335509 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
TPCN1-201ENST00000335509 NLRP13Q86W25 1043 aa20.28■□□□□ 0.84
TPCN1-201ENST00000335509 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
TPCN1-201ENST00000335509 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
TPCN1-201ENST00000335509 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
TPCN1-201ENST00000335509 RTF1Q92541 710 aaKnown RBP20.26■□□□□ 0.83
TPCN1-201ENST00000335509 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
TPCN1-201ENST00000335509 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
TPCN1-201ENST00000335509 HNRNPMP52272 730 aaKnown RBP eCLIP20.26■□□□□ 0.83
TPCN1-201ENST00000335509 RWDD1Q9H446 243 aaPredicted RBP20.26■□□□□ 0.83
TPCN1-201ENST00000335509 GOLGA2Q08379 1002 aa20.25■□□□□ 0.83
TPCN1-201ENST00000335509 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
TPCN1-201ENST00000335509 CCDC146Q8IYE0 955 aa20.25■□□□□ 0.83
TPCN1-201ENST00000335509 TULP1O00294 542 aaPredicted RBP20.24■□□□□ 0.83
TPCN1-201ENST00000335509 KIF3BO15066 747 aa20.24■□□□□ 0.83
TPCN1-201ENST00000335509 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
TPCN1-201ENST00000335509 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
TPCN1-201ENST00000335509 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
TPCN1-201ENST00000335509 MCCP23508 829 aa20.22■□□□□ 0.83
TPCN1-201ENST00000335509 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
TPCN1-201ENST00000335509 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
TPCN1-201ENST00000335509 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
TPCN1-201ENST00000335509 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
TPCN1-201ENST00000335509 NPHP1O15259 732 aa20.19■□□□□ 0.82
TPCN1-201ENST00000335509 SMC4Q9NTJ3 1288 aa20.19■□□□□ 0.82
TPCN1-201ENST00000335509 MSNP26038 577 aaKnown RBP20.19■□□□□ 0.82
TPCN1-201ENST00000335509 MFAP1P55081 439 aaKnown RBP20.18■□□□□ 0.82
TPCN1-201ENST00000335509 NUTM2DQ5VT03 806 aaPredicted RBP20.16■□□□□ 0.82
TPCN1-201ENST00000335509 PRKRIP1Q9H875 184 aaPredicted RBP20.16■□□□□ 0.82
TPCN1-201ENST00000335509 NRDCO43847 1150 aa20.15■□□□□ 0.82
TPCN1-201ENST00000335509 PDE3BQ13370 1112 aa20.15■□□□□ 0.82
TPCN1-201ENST00000335509 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
TPCN1-201ENST00000335509 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.82
TPCN1-201ENST00000335509 KIAA1211Q6ZU35 1233 aa20.14■□□□□ 0.81
TPCN1-201ENST00000335509 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
TPCN1-201ENST00000335509 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
TPCN1-201ENST00000335509 CFAP44Q96MT7 982 aa20.13■□□□□ 0.81
TPCN1-201ENST00000335509 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
TPCN1-201ENST00000335509 CENPJQ9HC77 1338 aaPredicted RBP20.12■□□□□ 0.81
TPCN1-201ENST00000335509 PLIN1O60240 522 aa20.11■□□□□ 0.81
TPCN1-201ENST00000335509 RRP7AQ9Y3A4 280 aaKnown RBP20.11■□□□□ 0.81
TPCN1-201ENST00000335509 GOLGA6L6A8MZA4 724 aa20.11■□□□□ 0.81
TPCN1-201ENST00000335509 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
TPCN1-201ENST00000335509 PANK3Q9H999 370 aa20.1■□□□□ 0.81
TPCN1-201ENST00000335509 WIZO95785 1651 aa20.1■□□□□ 0.81
TPCN1-201ENST00000335509 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
TPCN1-201ENST00000335509 CHAF1AQ13111 956 aaPredicted RBP20.09■□□□□ 0.81
TPCN1-201ENST00000335509 DRC7Q8IY82 874 aa20.09■□□□□ 0.81
TPCN1-201ENST00000335509 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
TPCN1-201ENST00000335509 TRHP20396 242 aaPredicted RBP20.08■□□□□ 0.81
TPCN1-201ENST00000335509 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.8
TPCN1-201ENST00000335509 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
TPCN1-201ENST00000335509 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
TPCN1-201ENST00000335509 STK31Q9BXU1 1019 aa20.07■□□□□ 0.8
TPCN1-201ENST00000335509 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
TPCN1-201ENST00000335509 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
TPCN1-201ENST00000335509 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
TPCN1-201ENST00000335509 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
TPCN1-201ENST00000335509 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
TPCN1-201ENST00000335509 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
TPCN1-201ENST00000335509 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
TPCN1-201ENST00000335509 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
TPCN1-201ENST00000335509 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
TPCN1-201ENST00000335509 EIF3AQ14152 1382 aaKnown RBP20.04■□□□□ 0.8
TPCN1-201ENST00000335509 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
TPCN1-201ENST00000335509 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
TPCN1-201ENST00000335509 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
TPCN1-201ENST00000335509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
TPCN1-201ENST00000335509 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.8
TPCN1-201ENST00000335509 TRIM6-TRIM34B2RNG4 842 aa20.02■□□□□ 0.8
TPCN1-201ENST00000335509 PDE4AP27815 886 aa20.02■□□□□ 0.8
TPCN1-201ENST00000335509 NOL8Q76FK4 1167 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms