RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
TRAPPC11-201ENST00000334690 EFCAB2Q5VUJ9 269 aa22.02■■□□□ 1.12
TRAPPC11-201ENST00000334690 ARID4BQ4LE39 1312 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC11-201ENST00000334690 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
TRAPPC11-201ENST00000334690 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
TRAPPC11-201ENST00000334690 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
TRAPPC11-201ENST00000334690 RSPH4AQ5TD94 716 aa22■■□□□ 1.11
TRAPPC11-201ENST00000334690 CCDC18Q5T9S5 1454 aa22■■□□□ 1.11
TRAPPC11-201ENST00000334690 RCAN3Q9UKA8 241 aa21.99■■□□□ 1.11
TRAPPC11-201ENST00000334690 SRPK2P78362 688 aaKnown RBP21.95■■□□□ 1.1
TRAPPC11-201ENST00000334690 NLRP13Q86W25 1043 aa21.93■■□□□ 1.1
TRAPPC11-201ENST00000334690 HDGFP51858 240 aaKnown RBP21.92■■□□□ 1.1
TRAPPC11-201ENST00000334690 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
TRAPPC11-201ENST00000334690 PLEKHG5O94827 1062 aa21.91■■□□□ 1.1
TRAPPC11-201ENST00000334690 TCERG1O14776 1098 aaKnown RBP21.9■■□□□ 1.1
TRAPPC11-201ENST00000334690 GGT6Q6P531 493 aa21.9■■□□□ 1.1
TRAPPC11-201ENST00000334690 PDE3BQ13370 1112 aa21.9■■□□□ 1.1
TRAPPC11-201ENST00000334690 TSHZ2Q9NRE2 1034 aa21.88■■□□□ 1.09
TRAPPC11-201ENST00000334690 HSP90AB1P08238 724 aaKnown RBP21.85■■□□□ 1.09
TRAPPC11-201ENST00000334690 EIF3AQ14152 1382 aaKnown RBP21.85■■□□□ 1.09
TRAPPC11-201ENST00000334690 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
TRAPPC11-201ENST00000334690 HNRNPMP52272 730 aaKnown RBP eCLIP21.84■■□□□ 1.09
TRAPPC11-201ENST00000334690 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
TRAPPC11-201ENST00000334690 HDGFL2Q7Z4V5 671 aaPredicted RBP21.83■■□□□ 1.08
TRAPPC11-201ENST00000334690 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
TRAPPC11-201ENST00000334690 CFAP44Q96MT7 982 aa21.82■■□□□ 1.08
TRAPPC11-201ENST00000334690 SAFB2Q14151 953 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRAPPC11-201ENST00000334690 IGF1RP08069 1367 aa21.82■■□□□ 1.08
TRAPPC11-201ENST00000334690 HSCBQ8IWL3 235 aa21.82■■□□□ 1.08
TRAPPC11-201ENST00000334690 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
TRAPPC11-201ENST00000334690 PTMAP06454 111 aaKnown RBP21.81■■□□□ 1.08
TRAPPC11-201ENST00000334690 U2AF1L5P0DN76 240 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC11-201ENST00000334690 U2AF1Q01081 240 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRAPPC11-201ENST00000334690 A0A0G2JS52 829 aa21.8■■□□□ 1.08
TRAPPC11-201ENST00000334690 GOLGA2Q08379 1002 aa21.79■■□□□ 1.08
TRAPPC11-201ENST00000334690 KIF3BO15066 747 aa21.79■■□□□ 1.08
TRAPPC11-201ENST00000334690 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC11-201ENST00000334690 CALD1Q05682 793 aaKnown RBP21.78■■□□□ 1.08
TRAPPC11-201ENST00000334690 KIF15Q9NS87 1388 aa21.78■■□□□ 1.08
TRAPPC11-201ENST00000334690 SPAG9O60271 1321 aaKnown RBP21.77■■□□□ 1.08
TRAPPC11-201ENST00000334690 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.07
TRAPPC11-201ENST00000334690 STK26Q9P289 416 aa21.77■■□□□ 1.07
TRAPPC11-201ENST00000334690 ZRSR1Q15695 479 aaKnown RBP21.76■■□□□ 1.07
TRAPPC11-201ENST00000334690 ST20-MTHFSA0A0A6YYL1 179 aa21.75■■□□□ 1.07
TRAPPC11-201ENST00000334690 LMOD2Q6P5Q4 547 aa21.75■■□□□ 1.07
TRAPPC11-201ENST00000334690 DEKP35659 375 aaKnown RBP21.75■■□□□ 1.07
TRAPPC11-201ENST00000334690 MYBBP1AQ9BQG0 1328 aaKnown RBP21.74■■□□□ 1.07
TRAPPC11-201ENST00000334690 OS9Q13438 667 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC11-201ENST00000334690 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
TRAPPC11-201ENST00000334690 MLECQ14165 292 aa21.72■■□□□ 1.07
TRAPPC11-201ENST00000334690 ZBED9Q6R2W3 1325 aa21.7■■□□□ 1.06
TRAPPC11-201ENST00000334690 L1TD1Q5T7N2 865 aaKnown RBP21.69■■□□□ 1.06
TRAPPC11-201ENST00000334690 PMFBP1Q8TBY8 1022 aa21.69■■□□□ 1.06
TRAPPC11-201ENST00000334690 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
TRAPPC11-201ENST00000334690 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
TRAPPC11-201ENST00000334690 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
TRAPPC11-201ENST00000334690 KIF21BO75037 1637 aa21.68■■□□□ 1.06
TRAPPC11-201ENST00000334690 KCNJ4P48050 445 aa21.67■■□□□ 1.06
TRAPPC11-201ENST00000334690 IPO9Q96P70 1041 aaKnown RBP21.67■■□□□ 1.06
TRAPPC11-201ENST00000334690 FGD6Q6ZV73 1430 aa21.67■■□□□ 1.06
TRAPPC11-201ENST00000334690 MCCP23508 829 aa21.67■■□□□ 1.06
TRAPPC11-201ENST00000334690 USP47Q96K76 1375 aa21.66■■□□□ 1.06
TRAPPC11-201ENST00000334690 DNTTIP2Q5QJE6 756 aaKnown RBP21.66■■□□□ 1.06
TRAPPC11-201ENST00000334690 SOX12O15370 315 aa21.65■■□□□ 1.06
TRAPPC11-201ENST00000334690 MYOM3Q5VTT5 1437 aa21.64■■□□□ 1.05
TRAPPC11-201ENST00000334690 FGD1P98174 961 aa21.64■■□□□ 1.05
TRAPPC11-201ENST00000334690 ITPRIPQ8IWB1 547 aa21.64■■□□□ 1.05
TRAPPC11-201ENST00000334690 RTN4Q9NQC3 1192 aaKnown RBP21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 UACAQ9BZF9 1416 aa21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 PANK3Q9H999 370 aa21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
TRAPPC11-201ENST00000334690 NAP1L5Q96NT1 182 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC11-201ENST00000334690 SMC4Q9NTJ3 1288 aa21.61■■□□□ 1.05
TRAPPC11-201ENST00000334690 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
TRAPPC11-201ENST00000334690 PTPRGP23470 1445 aa21.6■■□□□ 1.05
TRAPPC11-201ENST00000334690 WASHC2CQ9Y4E1 1318 aa21.6■■□□□ 1.05
TRAPPC11-201ENST00000334690 CHMP4AQ9BY43 222 aa21.6■■□□□ 1.05
TRAPPC11-201ENST00000334690 TPRNQ4KMQ1 711 aa21.59■■□□□ 1.05
TRAPPC11-201ENST00000334690 CCDC146Q8IYE0 955 aa21.58■■□□□ 1.05
TRAPPC11-201ENST00000334690 CUX1P39880 1505 aa21.57■■□□□ 1.04
TRAPPC11-201ENST00000334690 GBP4Q96PP9 640 aa21.57■■□□□ 1.04
TRAPPC11-201ENST00000334690 CDK11BP21127 795 aaKnown RBP21.56■■□□□ 1.04
TRAPPC11-201ENST00000334690 PLCB2Q00722 1185 aa21.56■■□□□ 1.04
TRAPPC11-201ENST00000334690 SPRYD3Q8NCJ5 442 aa21.56■■□□□ 1.04
TRAPPC11-201ENST00000334690 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
TRAPPC11-201ENST00000334690 PTMSP20962 102 aa21.56■■□□□ 1.04
TRAPPC11-201ENST00000334690 GOLGA6L4A6NEF3 574 aa21.55■■□□□ 1.04
TRAPPC11-201ENST00000334690 SLKQ9H2G2 1235 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC11-201ENST00000334690 CLUAP1Q96AJ1 413 aa21.54■■□□□ 1.04
TRAPPC11-201ENST00000334690 TRAK1Q9UPV9 953 aa21.53■■□□□ 1.04
TRAPPC11-201ENST00000334690 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
TRAPPC11-201ENST00000334690 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
TRAPPC11-201ENST00000334690 LMOD3Q0VAK6 560 aa21.53■■□□□ 1.04
TRAPPC11-201ENST00000334690 RRP1P56182 461 aaKnown RBP21.52■■□□□ 1.04
TRAPPC11-201ENST00000334690 CENPQQ7L2Z9 268 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC11-201ENST00000334690 NGEFQ8N5V2 710 aa21.52■■□□□ 1.04
TRAPPC11-201ENST00000334690 CCDC7Q96M83 1385 aa21.51■■□□□ 1.03
TRAPPC11-201ENST00000334690 APBB1O00213 710 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms