RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
AP1S3-201ENST00000334271 HRCP23327 699 aa15.6■□□□□ 0.09
AP1S3-201ENST00000334271 PTPN23Q9H3S7 1636 aa15.6■□□□□ 0.09
AP1S3-201ENST00000334271 AKNAQ7Z591 1439 aa15.57■□□□□ 0.08
AP1S3-201ENST00000334271 ZCCHC11Q5TAX3 1644 aaKnown RBP15.55■□□□□ 0.08
AP1S3-201ENST00000334271 ABCC10Q5T3U5 1492 aa15.55■□□□□ 0.08
AP1S3-201ENST00000334271 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
AP1S3-201ENST00000334271 ARAP3Q8WWN8 1544 aa15.52■□□□□ 0.08
AP1S3-201ENST00000334271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
AP1S3-201ENST00000334271 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
AP1S3-201ENST00000334271 GPATCH8Q9UKJ3 1502 aaKnown RBP15.51■□□□□ 0.07
AP1S3-201ENST00000334271 CDC42BPAQ5VT25 1732 aa15.5■□□□□ 0.07
AP1S3-201ENST00000334271 DNMT1P26358 1616 aaKnown RBP15.49■□□□□ 0.07
AP1S3-201ENST00000334271 PREX2Q70Z35 1606 aa15.49■□□□□ 0.07
AP1S3-201ENST00000334271 ROCK1Q13464 1354 aa15.48■□□□□ 0.07
AP1S3-201ENST00000334271 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
AP1S3-201ENST00000334271 SETD5Q9C0A6 1442 aa15.47■□□□□ 0.07
AP1S3-201ENST00000334271 PLEKHH2Q8IVE3 1493 aa15.47■□□□□ 0.07
AP1S3-201ENST00000334271 FAM50AQ14320 339 aaKnown RBP15.47■□□□□ 0.07
AP1S3-201ENST00000334271 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
AP1S3-201ENST00000334271 ARHGEF5Q12774 1597 aa15.46■□□□□ 0.06
AP1S3-201ENST00000334271 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.06
AP1S3-201ENST00000334271 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
AP1S3-201ENST00000334271 RSPH4AQ5TD94 716 aa15.45■□□□□ 0.06
AP1S3-201ENST00000334271 SHANK2Q9UPX8 1470 aa15.45■□□□□ 0.06
AP1S3-201ENST00000334271 GCC2Q8IWJ2 1684 aa15.45■□□□□ 0.06
AP1S3-201ENST00000334271 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
AP1S3-201ENST00000334271 CROCC2H7BZ55 1655 aa15.43■□□□□ 0.06
AP1S3-201ENST00000334271 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
AP1S3-201ENST00000334271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.06
AP1S3-201ENST00000334271 CAMSAP2Q08AD1 1489 aa15.43■□□□□ 0.06
AP1S3-201ENST00000334271 CFDP1Q9UEE9 299 aaPredicted RBP15.43■□□□□ 0.06
AP1S3-201ENST00000334271 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
AP1S3-201ENST00000334271 DAPK1P53355 1430 aa15.41■□□□□ 0.06
AP1S3-201ENST00000334271 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
AP1S3-201ENST00000334271 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
AP1S3-201ENST00000334271 ABCA9Q8IUA7 1624 aa15.41■□□□□ 0.06
AP1S3-201ENST00000334271 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
AP1S3-201ENST00000334271 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
AP1S3-201ENST00000334271 PLCH2O75038 1416 aa15.39■□□□□ 0.05
AP1S3-201ENST00000334271 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
AP1S3-201ENST00000334271 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
AP1S3-201ENST00000334271 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
AP1S3-201ENST00000334271 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
AP1S3-201ENST00000334271 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
AP1S3-201ENST00000334271 MAST1Q9Y2H9 1570 aa15.37■□□□□ 0.05
AP1S3-201ENST00000334271 ABCC5O15440 1437 aa15.37■□□□□ 0.05
AP1S3-201ENST00000334271 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
AP1S3-201ENST00000334271 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
AP1S3-201ENST00000334271 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
AP1S3-201ENST00000334271 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
AP1S3-201ENST00000334271 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
AP1S3-201ENST00000334271 NAIPQ13075 1403 aa15.36■□□□□ 0.05
AP1S3-201ENST00000334271 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
AP1S3-201ENST00000334271 CFAP74Q9C0B2 1584 aa15.35■□□□□ 0.05
AP1S3-201ENST00000334271 SAMD9LQ8IVG5 1584 aa15.34■□□□□ 0.05
AP1S3-201ENST00000334271 ASXL2Q76L83 1435 aa15.34■□□□□ 0.05
AP1S3-201ENST00000334271 DHX57Q6P158 1386 aaKnown RBP15.34■□□□□ 0.05
AP1S3-201ENST00000334271 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
AP1S3-201ENST00000334271 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.04
AP1S3-201ENST00000334271 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.04
AP1S3-201ENST00000334271 MBD5Q9P267 1494 aa15.32■□□□□ 0.04
AP1S3-201ENST00000334271 EFCAB2Q5VUJ9 269 aa15.31■□□□□ 0.04
AP1S3-201ENST00000334271 ANKRD30AQ9BXX3 1397 aa15.31■□□□□ 0.04
AP1S3-201ENST00000334271 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
AP1S3-201ENST00000334271 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
AP1S3-201ENST00000334271 GLI2P10070 1586 aa15.3■□□□□ 0.04
AP1S3-201ENST00000334271 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
AP1S3-201ENST00000334271 ITGAEP38570 1179 aa15.29■□□□□ 0.04
AP1S3-201ENST00000334271 ABCC1P33527 1531 aa15.29■□□□□ 0.04
AP1S3-201ENST00000334271 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
AP1S3-201ENST00000334271 TSPY4P0CV99 314 aa15.27■□□□□ 0.03
AP1S3-201ENST00000334271 TSPY10P0CW01 314 aa15.27■□□□□ 0.03
AP1S3-201ENST00000334271 RTEL1-TNFRSF6BF6WH68 1400 aa15.26■□□□□ 0.03
AP1S3-201ENST00000334271 C9orf84Q5VXU9 1444 aa15.26■□□□□ 0.03
AP1S3-201ENST00000334271 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
AP1S3-201ENST00000334271 SYCP2Q9BX26 1530 aa15.24■□□□□ 0.03
AP1S3-201ENST00000334271 NEO1Q92859 1461 aa15.22■□□□□ 0.03
AP1S3-201ENST00000334271 FANCAO15360 1455 aa15.22■□□□□ 0.03
AP1S3-201ENST00000334271 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
AP1S3-201ENST00000334271 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
AP1S3-201ENST00000334271 UBE2Q2Q8WVN8 375 aa15.2■□□□□ 0.02
AP1S3-201ENST00000334271 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
AP1S3-201ENST00000334271 MAP3K4Q9Y6R4 1608 aa15.2■□□□□ 0.02
AP1S3-201ENST00000334271 DUOX2Q9NRD8 1548 aa15.19■□□□□ 0.02
AP1S3-201ENST00000334271 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
AP1S3-201ENST00000334271 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
AP1S3-201ENST00000334271 ERBINQ96RT1 1412 aa15.17■□□□□ 0.02
AP1S3-201ENST00000334271 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
AP1S3-201ENST00000334271 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
AP1S3-201ENST00000334271 RRP7BPQ9NSQ0 103 aa15.15■□□□□ 0.02
AP1S3-201ENST00000334271 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
AP1S3-201ENST00000334271 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
AP1S3-201ENST00000334271 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
AP1S3-201ENST00000334271 HNRNPMP52272 730 aaKnown RBP eCLIP15.14■□□□□ 0.01
AP1S3-201ENST00000334271 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
AP1S3-201ENST00000334271 UNC13BO14795 1591 aa15.14■□□□□ 0.01
AP1S3-201ENST00000334271 DIP2BQ9P265 1576 aa15.13■□□□□ 0.01
AP1S3-201ENST00000334271 EIF2AK4Q9P2K8 1649 aaKnown RBP15.13■□□□□ 0.01
AP1S3-201ENST00000334271 CYB5RLQ6IPT4 315 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms