RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 MPHOSPH9Q99550 1183 aa25.08■■□□□ 1.61
TRIM50-201ENST00000333149 NEFLP07196 543 aa25.07■■□□□ 1.6
TRIM50-201ENST00000333149 KIAA0556O60303 1618 aa25.07■■□□□ 1.6
TRIM50-201ENST00000333149 HSPA5P11021 654 aaKnown RBP25.05■■□□□ 1.6
TRIM50-201ENST00000333149 WASHC2AQ641Q2 1341 aa25.05■■□□□ 1.6
TRIM50-201ENST00000333149 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
TRIM50-201ENST00000333149 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
TRIM50-201ENST00000333149 BCANQ96GW7 911 aa25.02■■□□□ 1.6
TRIM50-201ENST00000333149 DAPK1P53355 1430 aa25.01■■□□□ 1.59
TRIM50-201ENST00000333149 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
TRIM50-201ENST00000333149 ANKRD30BQ9BXX2 1392 aa24.99■■□□□ 1.59
TRIM50-201ENST00000333149 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
TRIM50-201ENST00000333149 RPRD2Q5VT52 1461 aaKnown RBP24.97■■□□□ 1.59
TRIM50-201ENST00000333149 ABCC5O15440 1437 aa24.97■■□□□ 1.59
TRIM50-201ENST00000333149 PRG4Q92954 1404 aaPredicted RBP24.96■■□□□ 1.59
TRIM50-201ENST00000333149 CNTLNQ9NXG0 1405 aa24.95■■□□□ 1.58
TRIM50-201ENST00000333149 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
TRIM50-201ENST00000333149 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
TRIM50-201ENST00000333149 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
TRIM50-201ENST00000333149 SHROOM2Q13796 1616 aa24.93■■□□□ 1.58
TRIM50-201ENST00000333149 RAPGEF6Q8TEU7 1601 aa24.91■■□□□ 1.58
TRIM50-201ENST00000333149 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
TRIM50-201ENST00000333149 CCDC7Q96M83 1385 aa24.89■■□□□ 1.57
TRIM50-201ENST00000333149 CDK11AQ9UQ88 783 aaPredicted RBP24.88■■□□□ 1.57
TRIM50-201ENST00000333149 HNRNPUQ00839 825 aaKnown RBP eCLIP24.87■■□□□ 1.572e-8■□□□□ 9
TRIM50-201ENST00000333149 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
TRIM50-201ENST00000333149 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
TRIM50-201ENST00000333149 C11orf95C9JLR9 678 aaPredicted RBP24.84■■□□□ 1.57
TRIM50-201ENST00000333149 FOXD1Q16676 465 aa24.84■■□□□ 1.57
TRIM50-201ENST00000333149 POLR1AO95602 1720 aaPredicted RBP24.83■■□□□ 1.57
TRIM50-201ENST00000333149 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
TRIM50-201ENST00000333149 ZNF644Q9H582 1327 aaPredicted RBP24.82■■□□□ 1.56
TRIM50-201ENST00000333149 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
TRIM50-201ENST00000333149 ANP32EQ9BTT0 268 aa24.82■■□□□ 1.56
TRIM50-201ENST00000333149 TROQ12816 1431 aaPredicted RBP24.82■■□□□ 1.56
TRIM50-201ENST00000333149 PRKRIP1Q9H875 184 aaPredicted RBP24.81■■□□□ 1.56
TRIM50-201ENST00000333149 ERICH6BQ5W0A0 696 aa24.81■■□□□ 1.56
TRIM50-201ENST00000333149 PTPRGP23470 1445 aa24.8■■□□□ 1.56
TRIM50-201ENST00000333149 PLB1Q6P1J6 1458 aa24.8■■□□□ 1.56
TRIM50-201ENST00000333149 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
TRIM50-201ENST00000333149 PZPP20742 1482 aa24.79■■□□□ 1.56
TRIM50-201ENST00000333149 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
TRIM50-201ENST00000333149 RBM19Q9Y4C8 960 aaKnown RBP24.78■■□□□ 1.56
TRIM50-201ENST00000333149 ITSN2Q9NZM3 1697 aa24.78■■□□□ 1.56
TRIM50-201ENST00000333149 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
TRIM50-201ENST00000333149 ADCY10Q96PN6 1610 aa24.77■■□□□ 1.56
TRIM50-201ENST00000333149 ADGBQ8N7X0 1667 aa24.76■■□□□ 1.55
TRIM50-201ENST00000333149 CAMSAP2Q08AD1 1489 aa24.76■■□□□ 1.55
TRIM50-201ENST00000333149 GPATCH8Q9UKJ3 1502 aaKnown RBP24.74■■□□□ 1.55
TRIM50-201ENST00000333149 CCDC184Q52MB2 194 aa24.74■■□□□ 1.55
TRIM50-201ENST00000333149 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
TRIM50-201ENST00000333149 ABCA8O94911 1581 aa24.73■■□□□ 1.55
TRIM50-201ENST00000333149 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
TRIM50-201ENST00000333149 CROCC2H7BZ55 1655 aa24.7■■□□□ 1.54
TRIM50-201ENST00000333149 CFDP1Q9UEE9 299 aaPredicted RBP24.7■■□□□ 1.54
TRIM50-201ENST00000333149 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
TRIM50-201ENST00000333149 ZBED9Q6R2W3 1325 aa24.67■■□□□ 1.54
TRIM50-201ENST00000333149 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
TRIM50-201ENST00000333149 KIF14Q15058 1648 aa24.64■■□□□ 1.54
TRIM50-201ENST00000333149 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
TRIM50-201ENST00000333149 ARID4BQ4LE39 1312 aaPredicted RBP24.62■■□□□ 1.53
TRIM50-201ENST00000333149 ATP10BO94823 1461 aa24.6■■□□□ 1.53
TRIM50-201ENST00000333149 PPP4R2Q9NY27 417 aa24.59■■□□□ 1.53
TRIM50-201ENST00000333149 DHX29Q7Z478 1369 aaKnown RBP24.59■■□□□ 1.53
TRIM50-201ENST00000333149 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.53
TRIM50-201ENST00000333149 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
TRIM50-201ENST00000333149 FAM9BQ8IZU0 186 aa24.58■■□□□ 1.53
TRIM50-201ENST00000333149 ANKRD50Q9ULJ7 1429 aa24.57■■□□□ 1.52
TRIM50-201ENST00000333149 BCORL1Q5H9F3 1711 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 USP47Q96K76 1375 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 PKD2Q13563 968 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 KDM5CP41229 1560 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 ABCC2Q92887 1545 aa24.55■■□□□ 1.52
TRIM50-201ENST00000333149 IRX6P78412 446 aaPredicted RBP24.54■■□□□ 1.52
TRIM50-201ENST00000333149 KDM5DQ9BY66 1539 aa24.54■■□□□ 1.52
TRIM50-201ENST00000333149 CDC42BPAQ5VT25 1732 aa24.53■■□□□ 1.52
TRIM50-201ENST00000333149 FANCIQ9NVI1 1328 aa24.53■■□□□ 1.52
TRIM50-201ENST00000333149 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
TRIM50-201ENST00000333149 ARHGEF12Q9NZN5 1544 aa24.51■■□□□ 1.51
TRIM50-201ENST00000333149 RALGAPBQ86X10 1494 aa24.51■■□□□ 1.51
TRIM50-201ENST00000333149 ZNF777Q9ULD5 760 aaPredicted RBP24.51■■□□□ 1.51
TRIM50-201ENST00000333149 UHRF1BP1LA0JNW5 1464 aa24.5■■□□□ 1.51
TRIM50-201ENST00000333149 ROCK2O75116 1388 aaKnown RBP24.48■■□□□ 1.51
TRIM50-201ENST00000333149 C9orf84Q5VXU9 1444 aa24.47■■□□□ 1.51
TRIM50-201ENST00000333149 SMG6Q86US8 1419 aaKnown RBP24.47■■□□□ 1.51
TRIM50-201ENST00000333149 ARHGEF5Q12774 1597 aa24.44■■□□□ 1.5
TRIM50-201ENST00000333149 NUP155O75694 1391 aa24.44■■□□□ 1.5
TRIM50-201ENST00000333149 MSH5O43196 834 aa24.4■■□□□ 1.5
TRIM50-201ENST00000333149 RNF123Q5XPI4 1314 aa24.4■■□□□ 1.5
TRIM50-201ENST00000333149 TSPY4P0CV99 314 aa24.39■■□□□ 1.49
TRIM50-201ENST00000333149 TSPY10P0CW01 314 aa24.39■■□□□ 1.49
TRIM50-201ENST00000333149 ZCCHC11Q5TAX3 1644 aaKnown RBP24.37■■□□□ 1.49
TRIM50-201ENST00000333149 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
TRIM50-201ENST00000333149 KTN1Q86UP2 1357 aaKnown RBP24.36■■□□□ 1.49
TRIM50-201ENST00000333149 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
TRIM50-201ENST00000333149 PNISRQ8TF01 805 aaKnown RBP24.35■■□□□ 1.49
TRIM50-201ENST00000333149 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
TRIM50-201ENST00000333149 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
TRIM50-201ENST00000333149 RSPH4AQ5TD94 716 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms