RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 FGD1P98174 961 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
RLIM-201ENST00000332687 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
RLIM-201ENST00000332687 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 PTMSP20962 102 aa6.35□□□□□ -1.39
RLIM-201ENST00000332687 SMARCA4P51532 1647 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 GLIPR1L2Q4G1C9 344 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 FAM9BQ8IZU0 186 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 USP35Q9P2H5 1018 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 KCNJ4P48050 445 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 PPM1GO15355 546 aaPredicted RBP6.33□□□□□ -1.4
RLIM-201ENST00000332687 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
RLIM-201ENST00000332687 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
RLIM-201ENST00000332687 TRIM44Q96DX7 344 aaPredicted RBP6.32□□□□□ -1.4
RLIM-201ENST00000332687 ROCK2O75116 1388 aaKnown RBP6.32□□□□□ -1.4
RLIM-201ENST00000332687 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
RLIM-201ENST00000332687 CCDC9Q9Y3X0 531 aaKnown RBP6.31□□□□□ -1.4
RLIM-201ENST00000332687 WASHC2CQ9Y4E1 1318 aa6.31□□□□□ -1.4
RLIM-201ENST00000332687 MLECQ14165 292 aa6.31□□□□□ -1.4
RLIM-201ENST00000332687 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
RLIM-201ENST00000332687 GGT6Q6P531 493 aa6.31□□□□□ -1.4
RLIM-201ENST00000332687 SMC4Q9NTJ3 1288 aa6.31□□□□□ -1.4
RLIM-201ENST00000332687 KIF3AQ9Y496 699 aa6.31□□□□□ -1.4
RLIM-201ENST00000332687 VGFO15240 615 aaPredicted RBP6.3□□□□□ -1.4
RLIM-201ENST00000332687 MORC1Q86VD1 984 aa6.3□□□□□ -1.4
RLIM-201ENST00000332687 AMOTL1Q8IY63 956 aa6.3□□□□□ -1.4
RLIM-201ENST00000332687 FANCD2Q9BXW9 1451 aa6.3□□□□□ -1.4
RLIM-201ENST00000332687 NGEFQ8N5V2 710 aa6.3□□□□□ -1.4
RLIM-201ENST00000332687 PTPRGP23470 1445 aa6.3□□□□□ -1.4
RLIM-201ENST00000332687 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
RLIM-201ENST00000332687 STK31Q9BXU1 1019 aa6.29□□□□□ -1.4
RLIM-201ENST00000332687 HMMRO75330 724 aa6.29□□□□□ -1.4
RLIM-201ENST00000332687 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
RLIM-201ENST00000332687 DDX10Q13206 875 aaKnown RBP6.29□□□□□ -1.4
RLIM-201ENST00000332687 TAF7LQ5H9L4 462 aa6.29□□□□□ -1.4
RLIM-201ENST00000332687 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
RLIM-201ENST00000332687 SCAPERQ9BY12 1400 aa6.28□□□□□ -1.4
RLIM-201ENST00000332687 JPH4Q96JJ6 628 aa6.28□□□□□ -1.4
RLIM-201ENST00000332687 CUX1P39880 1505 aa6.28□□□□□ -1.4
RLIM-201ENST00000332687 NOL10Q9BSC4 688 aaKnown RBP6.28□□□□□ -1.4
RLIM-201ENST00000332687 PAK3O75914 559 aaPredicted RBP6.28□□□□□ -1.4
RLIM-201ENST00000332687 EVA1CP58658 441 aa6.28□□□□□ -1.4
RLIM-201ENST00000332687 KTN1Q86UP2 1357 aaKnown RBP6.28□□□□□ -1.4
RLIM-201ENST00000332687 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
RLIM-201ENST00000332687 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 SF3B2Q13435 895 aaKnown RBP6.27□□□□□ -1.41
RLIM-201ENST00000332687 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
RLIM-201ENST00000332687 RALBP1Q15311 655 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 CCDC88BA6NC98 1476 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
RLIM-201ENST00000332687 ATAD2BQ9ULI0 1458 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 VPS8Q8N3P4 1428 aa6.27□□□□□ -1.41
RLIM-201ENST00000332687 GORABQ5T7V8 394 aa6.26□□□□□ -1.41
RLIM-201ENST00000332687 ATF3P18847 181 aa6.26□□□□□ -1.41
RLIM-201ENST00000332687 PRDM2Q13029 1718 aa6.26□□□□□ -1.41
RLIM-201ENST00000332687 LAS1LQ9Y4W2 734 aaKnown RBP6.26□□□□□ -1.41
RLIM-201ENST00000332687 MIA2Q96PC5 1412 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 DCAF11Q8TEB1 546 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 KIF3BO15066 747 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 TPM4P67936 248 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 NUP155O75694 1391 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 AMPHP49418 695 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 C1orf141Q5JVX7 400 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 GAPVD1Q14C86 1478 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 PSME1Q06323 249 aa6.25□□□□□ -1.41
RLIM-201ENST00000332687 TRIM34Q9BYJ4 488 aa6.24□□□□□ -1.41
RLIM-201ENST00000332687 PLEKHG5O94827 1062 aa6.24□□□□□ -1.41
RLIM-201ENST00000332687 KRI1Q8N9T8 703 aaKnown RBP6.24□□□□□ -1.41
RLIM-201ENST00000332687 ISY1Q9ULR0 285 aaKnown RBP6.24□□□□□ -1.41
RLIM-201ENST00000332687 EVC2Q86UK5 1308 aa6.24□□□□□ -1.41
RLIM-201ENST00000332687 DMRT2Q9Y5R5 561 aa6.24□□□□□ -1.41
RLIM-201ENST00000332687 IFT140Q96RY7 1462 aa6.24□□□□□ -1.41
RLIM-201ENST00000332687 TNNT2P45379 298 aaPredicted RBP6.23□□□□□ -1.41
RLIM-201ENST00000332687 CTDP1Q9Y5B0 961 aaPredicted RBP6.23□□□□□ -1.41
RLIM-201ENST00000332687 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 MRC2Q9UBG0 1479 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 CCDC144AA2RUR9 1427 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 ROCK1Q13464 1354 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
RLIM-201ENST00000332687 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
RLIM-201ENST00000332687 CLSTN1O94985 981 aa6.22□□□□□ -1.41
RLIM-201ENST00000332687 PTMAP06454 111 aaKnown RBP6.22□□□□□ -1.41
RLIM-201ENST00000332687 NEXNQ0ZGT2 675 aa6.22□□□□□ -1.41
RLIM-201ENST00000332687 DDX58O95786 925 aaKnown RBP6.22□□□□□ -1.41
RLIM-201ENST00000332687 CGNL1Q0VF96 1302 aa6.22□□□□□ -1.41
RLIM-201ENST00000332687 NCAPD3P42695 1498 aa6.22□□□□□ -1.41
RLIM-201ENST00000332687 SYAP1Q96A49 352 aaPredicted RBP6.21□□□□□ -1.41
RLIM-201ENST00000332687 SALL2Q9Y467 1007 aaPredicted RBP6.21□□□□□ -1.41
RLIM-201ENST00000332687 TDRD9Q8NDG6 1382 aaKnown RBP6.21□□□□□ -1.42
RLIM-201ENST00000332687 FKBP8Q14318 412 aa6.21□□□□□ -1.42
RLIM-201ENST00000332687 TTC5Q8N0Z6 440 aa6.21□□□□□ -1.42
RLIM-201ENST00000332687 CEP89Q96ST8 783 aa6.21□□□□□ -1.42
RLIM-201ENST00000332687 HMGXB3Q12766 1538 aa6.21□□□□□ -1.42
RLIM-201ENST00000332687 FRAT2O75474 233 aaPredicted RBP6.21□□□□□ -1.42
RLIM-201ENST00000332687 TCEAL9Q9UHQ7 104 aa6.21□□□□□ -1.42
RLIM-201ENST00000332687 HSP90AB1P08238 724 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms