RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
SS18L1-201ENST00000331758 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
SS18L1-201ENST00000331758 KANK1Q14678 1352 aa12.79□□□□□ -0.36
SS18L1-201ENST00000331758 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
SS18L1-201ENST00000331758 MLECQ14165 292 aa12.79□□□□□ -0.36
SS18L1-201ENST00000331758 KNSTRNQ9Y448 316 aa12.78□□□□□ -0.36
SS18L1-201ENST00000331758 OSCARQ8IYS5 282 aa12.77□□□□□ -0.36
SS18L1-201ENST00000331758 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
SS18L1-201ENST00000331758 ZNF608Q9ULD9 1512 aaPredicted RBP12.76□□□□□ -0.37
SS18L1-201ENST00000331758 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
SS18L1-201ENST00000331758 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
SS18L1-201ENST00000331758 CC2D1BQ5T0F9 858 aaKnown RBP12.76□□□□□ -0.37
SS18L1-201ENST00000331758 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
SS18L1-201ENST00000331758 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
SS18L1-201ENST00000331758 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
SS18L1-201ENST00000331758 UACAQ9BZF9 1416 aa12.73□□□□□ -0.37
SS18L1-201ENST00000331758 TMF1P82094 1093 aa12.73□□□□□ -0.37
SS18L1-201ENST00000331758 KIAA0586Q9BVV6 1533 aa12.73□□□□□ -0.37
SS18L1-201ENST00000331758 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
SS18L1-201ENST00000331758 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
SS18L1-201ENST00000331758 PCF11O94913 1555 aaKnown RBP12.72□□□□□ -0.37
SS18L1-201ENST00000331758 CCDC136Q96JN2 1154 aa12.71□□□□□ -0.37
SS18L1-201ENST00000331758 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.38
SS18L1-201ENST00000331758 CUL7Q14999 1698 aa12.7□□□□□ -0.38
SS18L1-201ENST00000331758 TNNT2P45379 298 aaPredicted RBP12.7□□□□□ -0.38
SS18L1-201ENST00000331758 SAFB2Q14151 953 aaKnown RBP eCLIP12.7□□□□□ -0.38
SS18L1-201ENST00000331758 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
SS18L1-201ENST00000331758 KIF15Q9NS87 1388 aa12.69□□□□□ -0.38
SS18L1-201ENST00000331758 POGKQ9P215 609 aa12.68□□□□□ -0.38
SS18L1-201ENST00000331758 EPRSP07814 1512 aaKnown RBP12.68□□□□□ -0.38
SS18L1-201ENST00000331758 EHBP1L1Q8N3D4 1523 aa12.68□□□□□ -0.38
SS18L1-201ENST00000331758 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
SS18L1-201ENST00000331758 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
SS18L1-201ENST00000331758 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
SS18L1-201ENST00000331758 ANKRD50Q9ULJ7 1429 aa12.67□□□□□ -0.38
SS18L1-201ENST00000331758 SYNJ2O15056 1496 aa12.67□□□□□ -0.38
SS18L1-201ENST00000331758 AFAP1Q8N556 730 aa12.66□□□□□ -0.38
SS18L1-201ENST00000331758 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
SS18L1-201ENST00000331758 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
SS18L1-201ENST00000331758 WASHC2CQ9Y4E1 1318 aa12.66□□□□□ -0.38
SS18L1-201ENST00000331758 STK26Q9P289 416 aa12.65□□□□□ -0.38
SS18L1-201ENST00000331758 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
SS18L1-201ENST00000331758 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
SS18L1-201ENST00000331758 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
SS18L1-201ENST00000331758 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
SS18L1-201ENST00000331758 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
SS18L1-201ENST00000331758 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
SS18L1-201ENST00000331758 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
SS18L1-201ENST00000331758 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
SS18L1-201ENST00000331758 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
SS18L1-201ENST00000331758 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
SS18L1-201ENST00000331758 NAIPQ13075 1403 aa12.61□□□□□ -0.39
SS18L1-201ENST00000331758 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
SS18L1-201ENST00000331758 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.6□□□□□ -0.39
SS18L1-201ENST00000331758 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
SS18L1-201ENST00000331758 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
SS18L1-201ENST00000331758 CFAP53Q96M91 514 aa12.6□□□□□ -0.39
SS18L1-201ENST00000331758 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
SS18L1-201ENST00000331758 USP47Q96K76 1375 aa12.6□□□□□ -0.39
SS18L1-201ENST00000331758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■□ 20.3
SS18L1-201ENST00000331758 SUPT6HQ7KZ85 1726 aaKnown RBP12.6□□□□□ -0.39
SS18L1-201ENST00000331758 ARHGAP5Q13017 1502 aa12.59□□□□□ -0.39
SS18L1-201ENST00000331758 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
SS18L1-201ENST00000331758 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.4
SS18L1-201ENST00000331758 DAPK1P53355 1430 aa12.58□□□□□ -0.4
SS18L1-201ENST00000331758 C9orf84Q5VXU9 1444 aa12.57□□□□□ -0.4
SS18L1-201ENST00000331758 ANP32AP39687 249 aaKnown RBP12.56□□□□□ -0.4
SS18L1-201ENST00000331758 PRKRIP1Q9H875 184 aaPredicted RBP12.56□□□□□ -0.4
SS18L1-201ENST00000331758 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
SS18L1-201ENST00000331758 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
SS18L1-201ENST00000331758 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SS18L1-201ENST00000331758 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
SS18L1-201ENST00000331758 FAM69CQ0P6D2 419 aa12.54□□□□□ -0.4
SS18L1-201ENST00000331758 RALBP1Q15311 655 aa12.54□□□□□ -0.4
SS18L1-201ENST00000331758 U2SURPO15042 1029 aaKnown RBP12.54□□□□□ -0.4
SS18L1-201ENST00000331758 ZBTB7CA1YPR0 619 aa12.53□□□□□ -0.4
SS18L1-201ENST00000331758 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
SS18L1-201ENST00000331758 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
SS18L1-201ENST00000331758 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.4
SS18L1-201ENST00000331758 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.41
SS18L1-201ENST00000331758 ANP32EQ9BTT0 268 aa12.52□□□□□ -0.41
SS18L1-201ENST00000331758 PANK3Q9H999 370 aa12.52□□□□□ -0.41
SS18L1-201ENST00000331758 ABCC5O15440 1437 aa12.51□□□□□ -0.41
SS18L1-201ENST00000331758 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
SS18L1-201ENST00000331758 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
SS18L1-201ENST00000331758 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
SS18L1-201ENST00000331758 PPP4R2Q9NY27 417 aa12.5□□□□□ -0.41
SS18L1-201ENST00000331758 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
SS18L1-201ENST00000331758 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
SS18L1-201ENST00000331758 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
SS18L1-201ENST00000331758 THOC2Q8NI27 1593 aaKnown RBP12.49□□□□□ -0.41
SS18L1-201ENST00000331758 KIAA1107Q9UPP5 1409 aa12.49□□□□□ -0.41
SS18L1-201ENST00000331758 SOX12O15370 315 aa12.49□□□□□ -0.41
SS18L1-201ENST00000331758 EIF3AQ14152 1382 aaKnown RBP12.49□□□□□ -0.41
SS18L1-201ENST00000331758 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
SS18L1-201ENST00000331758 MAPK8IP3Q9UPT6 1336 aa12.48□□□□□ -0.41
SS18L1-201ENST00000331758 PTPRKQ15262 1439 aa12.48□□□□□ -0.41
SS18L1-201ENST00000331758 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
SS18L1-201ENST00000331758 ROCK1Q13464 1354 aa12.47□□□□□ -0.41
SS18L1-201ENST00000331758 LAS1LQ9Y4W2 734 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms