RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
NPLOC4-201ENST00000331134 ARHGAP35Q9NRY4 1499 aa24.23■■□□□ 1.47
NPLOC4-201ENST00000331134 PDE4AP27815 886 aa24.23■■□□□ 1.47
NPLOC4-201ENST00000331134 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
NPLOC4-201ENST00000331134 CLUAP1Q96AJ1 413 aa24.2■■□□□ 1.47
NPLOC4-201ENST00000331134 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
NPLOC4-201ENST00000331134 KTN1Q86UP2 1357 aaKnown RBP24.19■■□□□ 1.46
NPLOC4-201ENST00000331134 APBB1O00213 710 aa24.16■■□□□ 1.46
NPLOC4-201ENST00000331134 SAFB2Q14151 953 aaKnown RBP eCLIP24.15■■□□□ 1.46
NPLOC4-201ENST00000331134 CCDC146Q8IYE0 955 aa24.15■■□□□ 1.46
NPLOC4-201ENST00000331134 MSNP26038 577 aaKnown RBP24.14■■□□□ 1.45
NPLOC4-201ENST00000331134 CASC1Q6TDU7 716 aa24.12■■□□□ 1.45
NPLOC4-201ENST00000331134 TAOK2Q9UL54 1235 aa24.12■■□□□ 1.45
NPLOC4-201ENST00000331134 RALBP1Q15311 655 aa24.12■■□□□ 1.45
NPLOC4-201ENST00000331134 MFAP1P55081 439 aaKnown RBP24.11■■□□□ 1.45
NPLOC4-201ENST00000331134 C14orf37Q86TY3 774 aa24.11■■□□□ 1.45
NPLOC4-201ENST00000331134 MORC1Q86VD1 984 aa24.1■■□□□ 1.45
NPLOC4-201ENST00000331134 NLRP13Q86W25 1043 aa24.09■■□□□ 1.45
NPLOC4-201ENST00000331134 FOXD4L1Q9NU39 408 aa24.09■■□□□ 1.45
NPLOC4-201ENST00000331134 GSE1Q14687 1217 aa24.09■■□□□ 1.45
NPLOC4-201ENST00000331134 WIZO95785 1651 aa24.08■■□□□ 1.45
NPLOC4-201ENST00000331134 ZBED9Q6R2W3 1325 aa24.08■■□□□ 1.44
NPLOC4-201ENST00000331134 NACADO15069 1562 aa24.08■■□□□ 1.44
NPLOC4-201ENST00000331134 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
NPLOC4-201ENST00000331134 AMER1Q5JTC6 1135 aaPredicted RBP24.07■■□□□ 1.44
NPLOC4-201ENST00000331134 GOLGA6L3A6NEY3 463 aa24.06■■□□□ 1.44
NPLOC4-201ENST00000331134 GOLGA2Q08379 1002 aa24.05■■□□□ 1.44
NPLOC4-201ENST00000331134 FMN1Q68DA7 1419 aa24.05■■□□□ 1.44
NPLOC4-201ENST00000331134 ROCK2O75116 1388 aaKnown RBP24.05■■□□□ 1.44
NPLOC4-201ENST00000331134 CRBNQ96SW2 442 aa24.04■■□□□ 1.44
NPLOC4-201ENST00000331134 NUP155O75694 1391 aa24.04■■□□□ 1.44
NPLOC4-201ENST00000331134 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
NPLOC4-201ENST00000331134 RRP1P56182 461 aaKnown RBP24.03■■□□□ 1.44
NPLOC4-201ENST00000331134 MS4A1P11836 297 aa24.02■■□□□ 1.44
NPLOC4-201ENST00000331134 FHOD3Q2V2M9 1422 aa24.02■■□□□ 1.44
NPLOC4-201ENST00000331134 U2AF1L5P0DN76 240 aaPredicted RBP24.02■■□□□ 1.44
NPLOC4-201ENST00000331134 U2AF1Q01081 240 aaKnown RBP eCLIP24.02■■□□□ 1.442e-6■■■□□ 17.1
NPLOC4-201ENST00000331134 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
NPLOC4-201ENST00000331134 POGKQ9P215 609 aa24.02■■□□□ 1.44
NPLOC4-201ENST00000331134 ITPRIPQ8IWB1 547 aa24.01■■□□□ 1.43
NPLOC4-201ENST00000331134 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
NPLOC4-201ENST00000331134 SOX12O15370 315 aa24■■□□□ 1.43
NPLOC4-201ENST00000331134 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
NPLOC4-201ENST00000331134 RWDD1Q9H446 243 aaPredicted RBP23.98■■□□□ 1.43
NPLOC4-201ENST00000331134 ZRSR1Q15695 479 aaKnown RBP23.97■■□□□ 1.43
NPLOC4-201ENST00000331134 ANO8Q9HCE9 1232 aaPredicted RBP23.96■■□□□ 1.43
NPLOC4-201ENST00000331134 IL27Q8NEV9 243 aa23.96■■□□□ 1.43
NPLOC4-201ENST00000331134 GBP4Q96PP9 640 aa23.96■■□□□ 1.43
NPLOC4-201ENST00000331134 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
NPLOC4-201ENST00000331134 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
NPLOC4-201ENST00000331134 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
NPLOC4-201ENST00000331134 SRPK2P78362 688 aaKnown RBP23.93■■□□□ 1.42
NPLOC4-201ENST00000331134 FAM161AQ3B820 660 aa23.93■■□□□ 1.42
NPLOC4-201ENST00000331134 VSIG10Q8N0Z9 540 aa23.92■■□□□ 1.42
NPLOC4-201ENST00000331134 KCNJ4P48050 445 aa23.91■■□□□ 1.42
NPLOC4-201ENST00000331134 PANK3Q9H999 370 aa23.9■■□□□ 1.42
NPLOC4-201ENST00000331134 STK26Q9P289 416 aa23.89■■□□□ 1.42
NPLOC4-201ENST00000331134 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
NPLOC4-201ENST00000331134 COG6Q9Y2V7 657 aa23.89■■□□□ 1.41
NPLOC4-201ENST00000331134 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.41
NPLOC4-201ENST00000331134 A0A0G2JS52 829 aa23.88■■□□□ 1.41
NPLOC4-201ENST00000331134 CENPJQ9HC77 1338 aaPredicted RBP23.88■■□□□ 1.41
NPLOC4-201ENST00000331134 OS9Q13438 667 aaPredicted RBP23.87■■□□□ 1.41
NPLOC4-201ENST00000331134 HSP90AA2PQ14568 343 aaPredicted RBP23.87■■□□□ 1.41
NPLOC4-201ENST00000331134 CHMP4BQ9H444 224 aaKnown RBP23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 FGD1P98174 961 aa23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 CENPQQ7L2Z9 268 aaPredicted RBP23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 BRPF3Q9ULD4 1205 aa23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 GOLGA6L4A6NEF3 574 aa23.86■■□□□ 1.41
NPLOC4-201ENST00000331134 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
NPLOC4-201ENST00000331134 FOXD4L5Q5VV16 416 aaPredicted RBP23.85■■□□□ 1.41
NPLOC4-201ENST00000331134 FOXD4L4Q8WXT5 416 aaPredicted RBP23.85■■□□□ 1.41
NPLOC4-201ENST00000331134 PMFBP1Q8TBY8 1022 aa23.85■■□□□ 1.41
NPLOC4-201ENST00000331134 NFKBIBQ15653 356 aa23.84■■□□□ 1.41
NPLOC4-201ENST00000331134 NOL8Q76FK4 1167 aaKnown RBP23.84■■□□□ 1.41
NPLOC4-201ENST00000331134 CCDC184Q52MB2 194 aa23.83■■□□□ 1.4
NPLOC4-201ENST00000331134 CHAF1AQ13111 956 aaPredicted RBP23.82■■□□□ 1.4
NPLOC4-201ENST00000331134 IPO8O15397 1037 aaKnown RBP23.82■■□□□ 1.4
NPLOC4-201ENST00000331134 MSH5O43196 834 aa23.82■■□□□ 1.4
NPLOC4-201ENST00000331134 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
NPLOC4-201ENST00000331134 HNRNPMP52272 730 aaKnown RBP eCLIP23.81■■□□□ 1.41e-6■■■■□ 20.4
NPLOC4-201ENST00000331134 DRC7Q8IY82 874 aa23.81■■□□□ 1.4
NPLOC4-201ENST00000331134 KIF7Q2M1P5 1343 aa23.81■■□□□ 1.4
NPLOC4-201ENST00000331134 APAF1O14727 1248 aa23.81■■□□□ 1.4
NPLOC4-201ENST00000331134 CDK11BP21127 795 aaKnown RBP23.81■■□□□ 1.4
NPLOC4-201ENST00000331134 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
NPLOC4-201ENST00000331134 CALD1Q05682 793 aaKnown RBP23.79■■□□□ 1.4
NPLOC4-201ENST00000331134 USP47Q96K76 1375 aa23.79■■□□□ 1.4
NPLOC4-201ENST00000331134 CDCA7LQ96GN5 454 aa23.78■■□□□ 1.4
NPLOC4-201ENST00000331134 GGT6Q6P531 493 aa23.76■■□□□ 1.39
NPLOC4-201ENST00000331134 CCDC18Q5T9S5 1454 aa23.76■■□□□ 1.39
NPLOC4-201ENST00000331134 ELL2O00472 640 aaPredicted RBP23.75■■□□□ 1.39
NPLOC4-201ENST00000331134 FOXD4L6Q3SYB3 417 aaPredicted RBP23.75■■□□□ 1.39
NPLOC4-201ENST00000331134 FOXD4L3Q6VB84 417 aaPredicted RBP23.75■■□□□ 1.39
NPLOC4-201ENST00000331134 KIAA2012Q0VF49 1180 aa23.75■■□□□ 1.39
NPLOC4-201ENST00000331134 CCDC7Q96M83 1385 aa23.74■■□□□ 1.39
NPLOC4-201ENST00000331134 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
NPLOC4-201ENST00000331134 LMOD2Q6P5Q4 547 aa23.73■■□□□ 1.39
NPLOC4-201ENST00000331134 TOP2AP11388 1531 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms