RNA–Protein interactions for RNA: ENST00000330554.4

TPM3P8-201, Transcript of tropomyosin 3 pseudogene 8, humanhuman

BASIC

Gene TPM3P8, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P8-201ENST00000330554 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
TPM3P8-201ENST00000330554 KANK4Q5T7N3 995 aaPredicted RBP23.56■■□□□ 1.36
TPM3P8-201ENST00000330554 MAP3K1Q13233 1512 aa23.55■■□□□ 1.36
TPM3P8-201ENST00000330554 CFAP74Q9C0B2 1584 aa23.55■■□□□ 1.36
TPM3P8-201ENST00000330554 DENND4BO75064 1496 aaPredicted RBP23.55■■□□□ 1.36
TPM3P8-201ENST00000330554 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
TPM3P8-201ENST00000330554 SCAPERQ9BY12 1400 aa23.53■■□□□ 1.36
TPM3P8-201ENST00000330554 LRRC9Q6ZRR7 1453 aa23.53■■□□□ 1.36
TPM3P8-201ENST00000330554 ADGRL1O94910 1474 aa23.52■■□□□ 1.36
TPM3P8-201ENST00000330554 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
TPM3P8-201ENST00000330554 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
TPM3P8-201ENST00000330554 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
TPM3P8-201ENST00000330554 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.34
TPM3P8-201ENST00000330554 PREX2Q70Z35 1606 aa23.44■■□□□ 1.34
TPM3P8-201ENST00000330554 AFAP1Q8N556 730 aa23.43■■□□□ 1.34
TPM3P8-201ENST00000330554 HNRNPMP52272 730 aaKnown RBP eCLIP23.42■■□□□ 1.34
TPM3P8-201ENST00000330554 CDC42BPBQ9Y5S2 1711 aa23.41■■□□□ 1.34
TPM3P8-201ENST00000330554 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
TPM3P8-201ENST00000330554 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.34
TPM3P8-201ENST00000330554 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.34
TPM3P8-201ENST00000330554 ZNF644Q9H582 1327 aaPredicted RBP23.38■■□□□ 1.33
TPM3P8-201ENST00000330554 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
TPM3P8-201ENST00000330554 ARID4BQ4LE39 1312 aaPredicted RBP23.36■■□□□ 1.33
TPM3P8-201ENST00000330554 KIAA1107Q9UPP5 1409 aa23.34■■□□□ 1.33
TPM3P8-201ENST00000330554 ITSN2Q9NZM3 1697 aa23.34■■□□□ 1.33
TPM3P8-201ENST00000330554 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.33
TPM3P8-201ENST00000330554 ABCC1P33527 1531 aa23.33■■□□□ 1.32
TPM3P8-201ENST00000330554 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
TPM3P8-201ENST00000330554 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.32
TPM3P8-201ENST00000330554 FRMPD1Q5SYB0 1578 aa23.32■■□□□ 1.32
TPM3P8-201ENST00000330554 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
TPM3P8-201ENST00000330554 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
TPM3P8-201ENST00000330554 MYOM3Q5VTT5 1437 aa23.32■■□□□ 1.32
TPM3P8-201ENST00000330554 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
TPM3P8-201ENST00000330554 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
TPM3P8-201ENST00000330554 RICTORQ6R327 1708 aa23.3■■□□□ 1.32
TPM3P8-201ENST00000330554 KDM4FA0A1W2PPD8 638 aa23.29■■□□□ 1.32
TPM3P8-201ENST00000330554 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
TPM3P8-201ENST00000330554 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
TPM3P8-201ENST00000330554 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
TPM3P8-201ENST00000330554 ZMYM4Q5VZL5 1548 aa23.28■■□□□ 1.32
TPM3P8-201ENST00000330554 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
TPM3P8-201ENST00000330554 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
TPM3P8-201ENST00000330554 YEATS2Q9ULM3 1422 aa23.26■■□□□ 1.31
TPM3P8-201ENST00000330554 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
TPM3P8-201ENST00000330554 MLH3Q9UHC1 1453 aa23.24■■□□□ 1.31
TPM3P8-201ENST00000330554 ATP10AO60312 1499 aa23.23■■□□□ 1.31
TPM3P8-201ENST00000330554 KDM5CP41229 1560 aa23.22■■□□□ 1.31
TPM3P8-201ENST00000330554 ARHGEF40Q8TER5 1519 aa23.21■■□□□ 1.31
TPM3P8-201ENST00000330554 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
TPM3P8-201ENST00000330554 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.3
TPM3P8-201ENST00000330554 MLECQ14165 292 aa23.19■■□□□ 1.3
TPM3P8-201ENST00000330554 HECW2Q9P2P5 1572 aa23.18■■□□□ 1.3
TPM3P8-201ENST00000330554 C9orf84Q5VXU9 1444 aa23.18■■□□□ 1.3
TPM3P8-201ENST00000330554 FGD6Q6ZV73 1430 aa23.18■■□□□ 1.3
TPM3P8-201ENST00000330554 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
TPM3P8-201ENST00000330554 RTEL1-TNFRSF6BF6WH68 1400 aa23.12■■□□□ 1.29
TPM3P8-201ENST00000330554 ATP7AQ04656 1500 aa23.11■■□□□ 1.29
TPM3P8-201ENST00000330554 PTPN23Q9H3S7 1636 aa23.11■■□□□ 1.29
TPM3P8-201ENST00000330554 ESF1Q9H501 851 aaKnown RBP23.1■■□□□ 1.29
TPM3P8-201ENST00000330554 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
TPM3P8-201ENST00000330554 DIP2CQ9Y2E4 1556 aa23.09■■□□□ 1.29
TPM3P8-201ENST00000330554 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
TPM3P8-201ENST00000330554 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
TPM3P8-201ENST00000330554 A2MP01023 1474 aa23.05■■□□□ 1.28
TPM3P8-201ENST00000330554 ABCA6Q8N139 1617 aa23.05■■□□□ 1.28
TPM3P8-201ENST00000330554 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
TPM3P8-201ENST00000330554 INO80Q9ULG1 1556 aaPredicted RBP23.03■■□□□ 1.28
TPM3P8-201ENST00000330554 ABCC5O15440 1437 aa23.03■■□□□ 1.28
TPM3P8-201ENST00000330554 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
TPM3P8-201ENST00000330554 DAPK1P53355 1430 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 ITGAEP38570 1179 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 GGT6Q6P531 493 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
TPM3P8-201ENST00000330554 KIF3BO15066 747 aa23■■□□□ 1.27
TPM3P8-201ENST00000330554 AGLP35573 1532 aa22.99■■□□□ 1.27
TPM3P8-201ENST00000330554 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
TPM3P8-201ENST00000330554 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
TPM3P8-201ENST00000330554 SHANK2Q9UPX8 1470 aa22.95■■□□□ 1.26
TPM3P8-201ENST00000330554 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
TPM3P8-201ENST00000330554 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
TPM3P8-201ENST00000330554 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
TPM3P8-201ENST00000330554 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
TPM3P8-201ENST00000330554 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
TPM3P8-201ENST00000330554 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
TPM3P8-201ENST00000330554 SIGLEC1Q9BZZ2 1709 aa22.93■■□□□ 1.26
TPM3P8-201ENST00000330554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.92■■□□□ 1.26
TPM3P8-201ENST00000330554 PTPRMP28827 1452 aa22.92■■□□□ 1.26
TPM3P8-201ENST00000330554 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
TPM3P8-201ENST00000330554 PLXNC1O60486 1568 aa22.88■■□□□ 1.25
TPM3P8-201ENST00000330554 NCOA1Q15788 1441 aa22.87■■□□□ 1.25
TPM3P8-201ENST00000330554 RRBP1Q9P2E9 1410 aaKnown RBP22.87■■□□□ 1.25
TPM3P8-201ENST00000330554 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
TPM3P8-201ENST00000330554 WASHC2CQ9Y4E1 1318 aa22.86■■□□□ 1.25
TPM3P8-201ENST00000330554 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
TPM3P8-201ENST00000330554 CEBPAP49715 358 aaPredicted RBP22.86■■□□□ 1.25
TPM3P8-201ENST00000330554 RIMS1Q86UR5 1692 aaKnown RBP22.85■■□□□ 1.25
TPM3P8-201ENST00000330554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms