RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 PREX2Q70Z35 1606 aa25.85■■□□□ 1.73
TPM2-201ENST00000329305 ADGRL1O94910 1474 aa25.85■■□□□ 1.73
TPM2-201ENST00000329305 DENND4BO75064 1496 aaPredicted RBP25.84■■□□□ 1.73
TPM2-201ENST00000329305 RAPGEF3O95398 923 aa25.82■■□□□ 1.72
TPM2-201ENST00000329305 SUPT6HQ7KZ85 1726 aaKnown RBP25.82■■□□□ 1.72
TPM2-201ENST00000329305 GPATCH8Q9UKJ3 1502 aaKnown RBP25.82■■□□□ 1.72
TPM2-201ENST00000329305 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
TPM2-201ENST00000329305 CDC42BPAQ5VT25 1732 aa25.8■■□□□ 1.72
TPM2-201ENST00000329305 CDC42BPBQ9Y5S2 1711 aa25.8■■□□□ 1.72
TPM2-201ENST00000329305 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
TPM2-201ENST00000329305 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
TPM2-201ENST00000329305 CFDP1Q9UEE9 299 aaPredicted RBP25.79■■□□□ 1.72
TPM2-201ENST00000329305 ZNF777Q9ULD5 760 aaPredicted RBP25.77■■□□□ 1.72
TPM2-201ENST00000329305 ITSN2Q9NZM3 1697 aa25.74■■□□□ 1.71
TPM2-201ENST00000329305 POGZQ7Z3K3 1410 aa25.73■■□□□ 1.71
TPM2-201ENST00000329305 FRMPD1Q5SYB0 1578 aa25.73■■□□□ 1.71
TPM2-201ENST00000329305 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
TPM2-201ENST00000329305 ABCC1P33527 1531 aa25.7■■□□□ 1.7
TPM2-201ENST00000329305 ZNF518AQ6AHZ1 1483 aa25.7■■□□□ 1.7
TPM2-201ENST00000329305 PLEKHH2Q8IVE3 1493 aa25.69■■□□□ 1.7
TPM2-201ENST00000329305 SAMD9LQ8IVG5 1584 aa25.67■■□□□ 1.7
TPM2-201ENST00000329305 ZMYM4Q5VZL5 1548 aa25.67■■□□□ 1.7
TPM2-201ENST00000329305 MAGI2Q86UL8 1455 aa25.65■■□□□ 1.7
TPM2-201ENST00000329305 KIAA1107Q9UPP5 1409 aa25.64■■□□□ 1.7
TPM2-201ENST00000329305 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
TPM2-201ENST00000329305 SYCP2Q9BX26 1530 aa25.63■■□□□ 1.69
TPM2-201ENST00000329305 ARHGEF12Q9NZN5 1544 aa25.63■■□□□ 1.69
TPM2-201ENST00000329305 MYT1LQ9UL68 1186 aa25.62■■□□□ 1.69
TPM2-201ENST00000329305 MYOM3Q5VTT5 1437 aa25.62■■□□□ 1.69
TPM2-201ENST00000329305 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
TPM2-201ENST00000329305 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.69
TPM2-201ENST00000329305 ZFYVE16Q7Z3T8 1539 aa25.6■■□□□ 1.69
TPM2-201ENST00000329305 KDM5CP41229 1560 aa25.6■■□□□ 1.69
TPM2-201ENST00000329305 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
TPM2-201ENST00000329305 ARHGEF40Q8TER5 1519 aa25.59■■□□□ 1.69
TPM2-201ENST00000329305 MIA2Q96PC5 1412 aa25.58■■□□□ 1.69
TPM2-201ENST00000329305 CAMSAP2Q08AD1 1489 aa25.57■■□□□ 1.68
TPM2-201ENST00000329305 YEATS2Q9ULM3 1422 aa25.55■■□□□ 1.68
TPM2-201ENST00000329305 HECW2Q9P2P5 1572 aa25.55■■□□□ 1.68
TPM2-201ENST00000329305 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
TPM2-201ENST00000329305 RSPH4AQ5TD94 716 aa25.52■■□□□ 1.68
TPM2-201ENST00000329305 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
TPM2-201ENST00000329305 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
TPM2-201ENST00000329305 ARID4BQ4LE39 1312 aaPredicted RBP25.5■■□□□ 1.67
TPM2-201ENST00000329305 ATP10AO60312 1499 aa25.49■■□□□ 1.67
TPM2-201ENST00000329305 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
TPM2-201ENST00000329305 C9orf84Q5VXU9 1444 aa25.47■■□□□ 1.67
TPM2-201ENST00000329305 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
TPM2-201ENST00000329305 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
TPM2-201ENST00000329305 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
TPM2-201ENST00000329305 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
TPM2-201ENST00000329305 TSPY4P0CV99 314 aa25.43■■□□□ 1.66
TPM2-201ENST00000329305 TSPY10P0CW01 314 aa25.43■■□□□ 1.66
TPM2-201ENST00000329305 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
TPM2-201ENST00000329305 DIP2CQ9Y2E4 1556 aa25.43■■□□□ 1.66
TPM2-201ENST00000329305 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
TPM2-201ENST00000329305 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
TPM2-201ENST00000329305 RTEL1-TNFRSF6BF6WH68 1400 aa25.41■■□□□ 1.66
TPM2-201ENST00000329305 KDM4FA0A1W2PPD8 638 aa25.41■■□□□ 1.66
TPM2-201ENST00000329305 INO80Q9ULG1 1556 aaPredicted RBP25.4■■□□□ 1.66
TPM2-201ENST00000329305 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
TPM2-201ENST00000329305 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
TPM2-201ENST00000329305 REREQ9P2R6 1566 aa25.37■■□□□ 1.65
TPM2-201ENST00000329305 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
TPM2-201ENST00000329305 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
TPM2-201ENST00000329305 MLECQ14165 292 aa25.31■■□□□ 1.64
TPM2-201ENST00000329305 A2MP01023 1474 aa25.31■■□□□ 1.64
TPM2-201ENST00000329305 SIGLEC1Q9BZZ2 1709 aa25.3■■□□□ 1.64
TPM2-201ENST00000329305 AGLP35573 1532 aa25.3■■□□□ 1.64
TPM2-201ENST00000329305 DAPK1P53355 1430 aa25.29■■□□□ 1.64
TPM2-201ENST00000329305 MAST1Q9Y2H9 1570 aa25.29■■□□□ 1.64
TPM2-201ENST00000329305 ABCC5O15440 1437 aa25.29■■□□□ 1.64
TPM2-201ENST00000329305 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
TPM2-201ENST00000329305 DNMT1P26358 1616 aaKnown RBP25.28■■□□□ 1.64
TPM2-201ENST00000329305 ADGBQ8N7X0 1667 aa25.28■■□□□ 1.64
TPM2-201ENST00000329305 ADAMTSL3P82987 1691 aa25.26■■□□□ 1.63
TPM2-201ENST00000329305 DHX29Q7Z478 1369 aaKnown RBP25.25■■□□□ 1.63
TPM2-201ENST00000329305 PLXNC1O60486 1568 aa25.24■■□□□ 1.63
TPM2-201ENST00000329305 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
TPM2-201ENST00000329305 MADDQ8WXG6 1647 aa25.22■■□□□ 1.63
TPM2-201ENST00000329305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.63
TPM2-201ENST00000329305 ESF1Q9H501 851 aaKnown RBP25.2■■□□□ 1.62
TPM2-201ENST00000329305 CHIC2Q9UKJ5 165 aa25.19■■□□□ 1.62
TPM2-201ENST00000329305 ANKRD30AQ9BXX3 1397 aa25.18■■□□□ 1.62
TPM2-201ENST00000329305 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
TPM2-201ENST00000329305 KIF15Q9NS87 1388 aa25.17■■□□□ 1.62
TPM2-201ENST00000329305 PTPRMP28827 1452 aa25.16■■□□□ 1.62
TPM2-201ENST00000329305 KIF3BO15066 747 aa25.15■■□□□ 1.62
TPM2-201ENST00000329305 GGT6Q6P531 493 aa25.15■■□□□ 1.62
TPM2-201ENST00000329305 RRP7BPQ9NSQ0 103 aa25.15■■□□□ 1.62
TPM2-201ENST00000329305 RIMS1Q86UR5 1692 aaKnown RBP25.15■■□□□ 1.62
TPM2-201ENST00000329305 FER1L4A9Z1Z3 1794 aa25.15■■□□□ 1.62
TPM2-201ENST00000329305 DUOX2Q9NRD8 1548 aa25.14■■□□□ 1.62
TPM2-201ENST00000329305 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
TPM2-201ENST00000329305 ITGAEP38570 1179 aa25.11■■□□□ 1.61
TPM2-201ENST00000329305 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
TPM2-201ENST00000329305 NCOA1Q15788 1441 aa25.11■■□□□ 1.61
TPM2-201ENST00000329305 CNTLNQ9NXG0 1405 aa25.11■■□□□ 1.61
TPM2-201ENST00000329305 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
TPM2-201ENST00000329305 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms