RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
DDX53-201ENST00000327968 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
DDX53-201ENST00000327968 LAS1LQ9Y4W2 734 aaKnown RBP13.1□□□□□ -0.31
DDX53-201ENST00000327968 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
DDX53-201ENST00000327968 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
DDX53-201ENST00000327968 ABCA8O94911 1581 aa13.09□□□□□ -0.31
DDX53-201ENST00000327968 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
DDX53-201ENST00000327968 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
DDX53-201ENST00000327968 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
DDX53-201ENST00000327968 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
DDX53-201ENST00000327968 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
DDX53-201ENST00000327968 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
DDX53-201ENST00000327968 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
DDX53-201ENST00000327968 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
DDX53-201ENST00000327968 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
DDX53-201ENST00000327968 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
DDX53-201ENST00000327968 FOXD1Q16676 465 aa13.05□□□□□ -0.32
DDX53-201ENST00000327968 RRP7BPQ9NSQ0 103 aa13.05□□□□□ -0.32
DDX53-201ENST00000327968 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
DDX53-201ENST00000327968 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
DDX53-201ENST00000327968 EPRSP07814 1512 aaKnown RBP13.04□□□□□ -0.32
DDX53-201ENST00000327968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX53-201ENST00000327968 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
DDX53-201ENST00000327968 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
DDX53-201ENST00000327968 JPH4Q96JJ6 628 aa13.01□□□□□ -0.33
DDX53-201ENST00000327968 UHRF1BP1LA0JNW5 1464 aa13□□□□□ -0.33
DDX53-201ENST00000327968 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
DDX53-201ENST00000327968 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
DDX53-201ENST00000327968 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
DDX53-201ENST00000327968 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
DDX53-201ENST00000327968 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
DDX53-201ENST00000327968 NEFMP07197 916 aa12.94□□□□□ -0.34
DDX53-201ENST00000327968 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
DDX53-201ENST00000327968 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
DDX53-201ENST00000327968 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX53-201ENST00000327968 FBLN2P98095 1184 aa12.93□□□□□ -0.34
DDX53-201ENST00000327968 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
DDX53-201ENST00000327968 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
DDX53-201ENST00000327968 CDK13Q14004 1512 aaKnown RBP12.93□□□□□ -0.34
DDX53-201ENST00000327968 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
DDX53-201ENST00000327968 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
DDX53-201ENST00000327968 PTPRGP23470 1445 aa12.91□□□□□ -0.34
DDX53-201ENST00000327968 MIA2Q96PC5 1412 aa12.91□□□□□ -0.34
DDX53-201ENST00000327968 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
DDX53-201ENST00000327968 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
DDX53-201ENST00000327968 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
DDX53-201ENST00000327968 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
DDX53-201ENST00000327968 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
DDX53-201ENST00000327968 MTUS2Q5JR59 1369 aa12.9□□□□□ -0.35
DDX53-201ENST00000327968 MYT1LQ9UL68 1186 aa12.89□□□□□ -0.35
DDX53-201ENST00000327968 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
DDX53-201ENST00000327968 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
DDX53-201ENST00000327968 AKNAQ7Z591 1439 aa12.89□□□□□ -0.35
DDX53-201ENST00000327968 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
DDX53-201ENST00000327968 ARXQ96QS3 562 aa12.88□□□□□ -0.35
DDX53-201ENST00000327968 ATP10BO94823 1461 aa12.88□□□□□ -0.35
DDX53-201ENST00000327968 KIF14Q15058 1648 aa12.88□□□□□ -0.35
DDX53-201ENST00000327968 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
DDX53-201ENST00000327968 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
DDX53-201ENST00000327968 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
DDX53-201ENST00000327968 ZCCHC11Q5TAX3 1644 aaKnown RBP12.85□□□□□ -0.35
DDX53-201ENST00000327968 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
DDX53-201ENST00000327968 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
DDX53-201ENST00000327968 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
DDX53-201ENST00000327968 TMC1Q8TDI8 760 aa12.83□□□□□ -0.35
DDX53-201ENST00000327968 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
DDX53-201ENST00000327968 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
DDX53-201ENST00000327968 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
DDX53-201ENST00000327968 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
DDX53-201ENST00000327968 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
DDX53-201ENST00000327968 ARAP3Q8WWN8 1544 aa12.8□□□□□ -0.36
DDX53-201ENST00000327968 DNMT1P26358 1616 aaKnown RBP12.8□□□□□ -0.36
DDX53-201ENST00000327968 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
DDX53-201ENST00000327968 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
DDX53-201ENST00000327968 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
DDX53-201ENST00000327968 PLIN1O60240 522 aa12.79□□□□□ -0.36
DDX53-201ENST00000327968 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
DDX53-201ENST00000327968 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.36
DDX53-201ENST00000327968 GPATCH8Q9UKJ3 1502 aaKnown RBP12.77□□□□□ -0.37
DDX53-201ENST00000327968 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.37
DDX53-201ENST00000327968 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
DDX53-201ENST00000327968 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
DDX53-201ENST00000327968 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
DDX53-201ENST00000327968 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
DDX53-201ENST00000327968 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
DDX53-201ENST00000327968 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
DDX53-201ENST00000327968 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
DDX53-201ENST00000327968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX53-201ENST00000327968 PDE4AP27815 886 aa12.73□□□□□ -0.37
DDX53-201ENST00000327968 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
DDX53-201ENST00000327968 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
DDX53-201ENST00000327968 ABCA9Q8IUA7 1624 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 CAMSAP2Q08AD1 1489 aa12.72□□□□□ -0.37
DDX53-201ENST00000327968 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
DDX53-201ENST00000327968 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms