RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
SP1-201ENST00000327443 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
SP1-201ENST00000327443 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
SP1-201ENST00000327443 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
SP1-201ENST00000327443 ITSN2Q9NZM3 1697 aa13.76□□□□□ -0.21
SP1-201ENST00000327443 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
SP1-201ENST00000327443 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
SP1-201ENST00000327443 PTPRGP23470 1445 aa13.73□□□□□ -0.21
SP1-201ENST00000327443 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
SP1-201ENST00000327443 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
SP1-201ENST00000327443 PDIA4P13667 645 aaKnown RBP13.73□□□□□ -0.21
SP1-201ENST00000327443 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
SP1-201ENST00000327443 MTUS2Q5JR59 1369 aa13.73□□□□□ -0.21
SP1-201ENST00000327443 UACAQ9BZF9 1416 aa13.73□□□□□ -0.21
SP1-201ENST00000327443 FBLN2P98095 1184 aa13.72□□□□□ -0.21
SP1-201ENST00000327443 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
SP1-201ENST00000327443 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
SP1-201ENST00000327443 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.21
SP1-201ENST00000327443 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.21
SP1-201ENST00000327443 FGD1P98174 961 aa13.71□□□□□ -0.22
SP1-201ENST00000327443 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
SP1-201ENST00000327443 PHLDB1Q86UU1 1377 aa13.7□□□□□ -0.22
SP1-201ENST00000327443 KIF14Q15058 1648 aa13.69□□□□□ -0.22
SP1-201ENST00000327443 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
SP1-201ENST00000327443 ATP10BO94823 1461 aa13.69□□□□□ -0.22
SP1-201ENST00000327443 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
SP1-201ENST00000327443 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
SP1-201ENST00000327443 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
SP1-201ENST00000327443 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
SP1-201ENST00000327443 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
SP1-201ENST00000327443 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
SP1-201ENST00000327443 ARAP3Q8WWN8 1544 aa13.64□□□□□ -0.23
SP1-201ENST00000327443 AAMPQ13685 434 aa13.63□□□□□ -0.23
SP1-201ENST00000327443 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
SP1-201ENST00000327443 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
SP1-201ENST00000327443 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
SP1-201ENST00000327443 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
SP1-201ENST00000327443 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
SP1-201ENST00000327443 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
SP1-201ENST00000327443 GCC2Q8IWJ2 1684 aa13.61□□□□□ -0.23
SP1-201ENST00000327443 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
SP1-201ENST00000327443 CROCC2H7BZ55 1655 aa13.6□□□□□ -0.23
SP1-201ENST00000327443 ARHGEF5Q12774 1597 aa13.59□□□□□ -0.23
SP1-201ENST00000327443 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
SP1-201ENST00000327443 GPATCH8Q9UKJ3 1502 aaKnown RBP13.58□□□□□ -0.24
SP1-201ENST00000327443 ADGBQ8N7X0 1667 aa13.57□□□□□ -0.24
SP1-201ENST00000327443 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
SP1-201ENST00000327443 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
SP1-201ENST00000327443 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
SP1-201ENST00000327443 ROCK1Q13464 1354 aa13.56□□□□□ -0.24
SP1-201ENST00000327443 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
SP1-201ENST00000327443 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
SP1-201ENST00000327443 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
SP1-201ENST00000327443 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
SP1-201ENST00000327443 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
SP1-201ENST00000327443 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
SP1-201ENST00000327443 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
SP1-201ENST00000327443 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
SP1-201ENST00000327443 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.24
SP1-201ENST00000327443 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.24
SP1-201ENST00000327443 CDC42BPBQ9Y5S2 1711 aa13.52□□□□□ -0.25
SP1-201ENST00000327443 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
SP1-201ENST00000327443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
SP1-201ENST00000327443 BRPF3Q9ULD4 1205 aa13.5□□□□□ -0.25
SP1-201ENST00000327443 WDR7Q9Y4E6 1490 aa13.5□□□□□ -0.25
SP1-201ENST00000327443 KIAA1107Q9UPP5 1409 aa13.49□□□□□ -0.25
SP1-201ENST00000327443 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
SP1-201ENST00000327443 DAPK1P53355 1430 aa13.49□□□□□ -0.25
SP1-201ENST00000327443 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
SP1-201ENST00000327443 CFAP74Q9C0B2 1584 aa13.48□□□□□ -0.25
SP1-201ENST00000327443 SAMD9LQ8IVG5 1584 aa13.46□□□□□ -0.25
SP1-201ENST00000327443 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
SP1-201ENST00000327443 RSPH4AQ5TD94 716 aa13.45□□□□□ -0.26
SP1-201ENST00000327443 ABCC5O15440 1437 aa13.45□□□□□ -0.26
SP1-201ENST00000327443 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
SP1-201ENST00000327443 PLCH2O75038 1416 aa13.45□□□□□ -0.26
SP1-201ENST00000327443 NAIPQ13075 1403 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 PTPRKQ15262 1439 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 PLXNC1O60486 1568 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 GLI2P10070 1586 aa13.44□□□□□ -0.26
SP1-201ENST00000327443 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
SP1-201ENST00000327443 RAB3GAP2Q9H2M9 1393 aa13.42□□□□□ -0.26
SP1-201ENST00000327443 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
SP1-201ENST00000327443 ABCC1P33527 1531 aa13.41□□□□□ -0.26
SP1-201ENST00000327443 CCDC141Q6ZP82 1450 aa13.4□□□□□ -0.26
SP1-201ENST00000327443 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
SP1-201ENST00000327443 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
SP1-201ENST00000327443 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
SP1-201ENST00000327443 ASXL2Q76L83 1435 aa13.38□□□□□ -0.27
SP1-201ENST00000327443 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
SP1-201ENST00000327443 ARHGAP5Q13017 1502 aa13.38□□□□□ -0.27
SP1-201ENST00000327443 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
SP1-201ENST00000327443 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
SP1-201ENST00000327443 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
SP1-201ENST00000327443 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
SP1-201ENST00000327443 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
SP1-201ENST00000327443 MAP3K4Q9Y6R4 1608 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms