RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
RPAIN-201ENST00000327154 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
RPAIN-201ENST00000327154 BCORL1Q5H9F3 1711 aa22.87■■□□□ 1.25
RPAIN-201ENST00000327154 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
RPAIN-201ENST00000327154 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
RPAIN-201ENST00000327154 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
RPAIN-201ENST00000327154 CCDC18Q5T9S5 1454 aa22.85■■□□□ 1.25
RPAIN-201ENST00000327154 ARHGAP5Q13017 1502 aa22.85■■□□□ 1.25
RPAIN-201ENST00000327154 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
RPAIN-201ENST00000327154 MLECQ14165 292 aa22.84■■□□□ 1.25
RPAIN-201ENST00000327154 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
RPAIN-201ENST00000327154 MADDQ8WXG6 1647 aa22.82■■□□□ 1.24
RPAIN-201ENST00000327154 FYCO1Q9BQS8 1478 aa22.81■■□□□ 1.24
RPAIN-201ENST00000327154 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
RPAIN-201ENST00000327154 ATP10AO60312 1499 aa22.79■■□□□ 1.24
RPAIN-201ENST00000327154 ZNF518AQ6AHZ1 1483 aa22.78■■□□□ 1.24
RPAIN-201ENST00000327154 SIGLEC1Q9BZZ2 1709 aa22.75■■□□□ 1.23
RPAIN-201ENST00000327154 C9orf84Q5VXU9 1444 aa22.74■■□□□ 1.23
RPAIN-201ENST00000327154 ILDR1Q86SU0 546 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-201ENST00000327154 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
RPAIN-201ENST00000327154 RIMS1Q86UR5 1692 aaKnown RBP22.73■■□□□ 1.23
RPAIN-201ENST00000327154 CDC42BPBQ9Y5S2 1711 aa22.72■■□□□ 1.23
RPAIN-201ENST00000327154 TRAPPC8Q9Y2L5 1435 aa22.72■■□□□ 1.23
RPAIN-201ENST00000327154 ARHGEF12Q9NZN5 1544 aa22.71■■□□□ 1.23
RPAIN-201ENST00000327154 KDM5CP41229 1560 aa22.69■■□□□ 1.22
RPAIN-201ENST00000327154 PREX2Q70Z35 1606 aa22.68■■□□□ 1.22
RPAIN-201ENST00000327154 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
RPAIN-201ENST00000327154 MLH3Q9UHC1 1453 aa22.66■■□□□ 1.22
RPAIN-201ENST00000327154 HNRNPMP52272 730 aaKnown RBP eCLIP22.66■■□□□ 1.22
RPAIN-201ENST00000327154 ABCC1P33527 1531 aa22.66■■□□□ 1.22
RPAIN-201ENST00000327154 LMTK3Q96Q04 1460 aa22.66■■□□□ 1.22
RPAIN-201ENST00000327154 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
RPAIN-201ENST00000327154 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
RPAIN-201ENST00000327154 CFDP1Q9UEE9 299 aaPredicted RBP22.65■■□□□ 1.22
RPAIN-201ENST00000327154 CEBPAP49715 358 aaPredicted RBP22.64■■□□□ 1.21
RPAIN-201ENST00000327154 HSPA2P54652 639 aa22.64■■□□□ 1.21
RPAIN-201ENST00000327154 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
RPAIN-201ENST00000327154 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
RPAIN-201ENST00000327154 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
RPAIN-201ENST00000327154 DIP2CQ9Y2E4 1556 aa22.61■■□□□ 1.21
RPAIN-201ENST00000327154 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
RPAIN-201ENST00000327154 SPAG9O60271 1321 aaKnown RBP22.58■■□□□ 1.21
RPAIN-201ENST00000327154 FER1L4A9Z1Z3 1794 aa22.58■■□□□ 1.21
RPAIN-201ENST00000327154 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
RPAIN-201ENST00000327154 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
RPAIN-201ENST00000327154 ESF1Q9H501 851 aaKnown RBP22.56■■□□□ 1.2
RPAIN-201ENST00000327154 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
RPAIN-201ENST00000327154 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
RPAIN-201ENST00000327154 KIAA1107Q9UPP5 1409 aa22.55■■□□□ 1.2
RPAIN-201ENST00000327154 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-201ENST00000327154 PLEKHH2Q8IVE3 1493 aa22.53■■□□□ 1.2
RPAIN-201ENST00000327154 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
RPAIN-201ENST00000327154 AGLP35573 1532 aa22.52■■□□□ 1.2
RPAIN-201ENST00000327154 EHBP1L1Q8N3D4 1523 aa22.48■■□□□ 1.19
RPAIN-201ENST00000327154 TIAM1Q13009 1591 aa22.46■■□□□ 1.19
RPAIN-201ENST00000327154 FBXO41Q8TF61 875 aa22.44■■□□□ 1.18
RPAIN-201ENST00000327154 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
RPAIN-201ENST00000327154 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
RPAIN-201ENST00000327154 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
RPAIN-201ENST00000327154 UHRF1BP1Q6BDS2 1440 aa22.41■■□□□ 1.18
RPAIN-201ENST00000327154 CNTLNQ9NXG0 1405 aa22.41■■□□□ 1.18
RPAIN-201ENST00000327154 A2MP01023 1474 aa22.41■■□□□ 1.18
RPAIN-201ENST00000327154 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
RPAIN-201ENST00000327154 GGT6Q6P531 493 aa22.4■■□□□ 1.18
RPAIN-201ENST00000327154 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.17
RPAIN-201ENST00000327154 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
RPAIN-201ENST00000327154 INO80Q9ULG1 1556 aaPredicted RBP22.38■■□□□ 1.17
RPAIN-201ENST00000327154 C3P01024 1663 aa22.37■■□□□ 1.17
RPAIN-201ENST00000327154 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
RPAIN-201ENST00000327154 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
RPAIN-201ENST00000327154 RSPH4AQ5TD94 716 aa22.35■■□□□ 1.17
RPAIN-201ENST00000327154 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
RPAIN-201ENST00000327154 SETD1BQ9UPS6 1966 aaKnown RBP22.35■■□□□ 1.17
RPAIN-201ENST00000327154 RTEL1-TNFRSF6BF6WH68 1400 aa22.34■■□□□ 1.17
RPAIN-201ENST00000327154 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
RPAIN-201ENST00000327154 PLXNC1O60486 1568 aa22.33■■□□□ 1.16
RPAIN-201ENST00000327154 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
RPAIN-201ENST00000327154 CAMSAP2Q08AD1 1489 aa22.31■■□□□ 1.16
RPAIN-201ENST00000327154 DHX29Q7Z478 1369 aaKnown RBP22.31■■□□□ 1.16
RPAIN-201ENST00000327154 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
RPAIN-201ENST00000327154 CCDC141Q6ZP82 1450 aa22.29■■□□□ 1.16
RPAIN-201ENST00000327154 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
RPAIN-201ENST00000327154 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
RPAIN-201ENST00000327154 NPATQ14207 1427 aa22.29■■□□□ 1.16
RPAIN-201ENST00000327154 KIF3BO15066 747 aa22.28■■□□□ 1.16
RPAIN-201ENST00000327154 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
RPAIN-201ENST00000327154 STRCQ7RTU9 1775 aa22.25■■□□□ 1.15
RPAIN-201ENST00000327154 MROH2AA6NES4 1674 aa22.24■■□□□ 1.15
RPAIN-201ENST00000327154 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
RPAIN-201ENST00000327154 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
RPAIN-201ENST00000327154 PTPRKQ15262 1439 aa22.23■■□□□ 1.15
RPAIN-201ENST00000327154 APLP2Q06481 763 aa22.22■■□□□ 1.15
RPAIN-201ENST00000327154 PTPRTO14522 1441 aa22.2■■□□□ 1.14
RPAIN-201ENST00000327154 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
RPAIN-201ENST00000327154 ARHGEF5Q12774 1597 aa22.19■■□□□ 1.14
RPAIN-201ENST00000327154 WASHC2CQ9Y4E1 1318 aa22.18■■□□□ 1.14
RPAIN-201ENST00000327154 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
RPAIN-201ENST00000327154 NCKAP5LQ9HCH0 1330 aa22.17■■□□□ 1.14
RPAIN-201ENST00000327154 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
RPAIN-201ENST00000327154 MIA2Q96PC5 1412 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms