RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ERICH6Q7L0X2 663 aa23.01■■□□□ 1.27
SSH1-201ENST00000326470 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
SSH1-201ENST00000326470 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
SSH1-201ENST00000326470 ZBED9Q6R2W3 1325 aa22.99■■□□□ 1.27
SSH1-201ENST00000326470 C11orf95C9JLR9 678 aaPredicted RBP22.99■■□□□ 1.27
SSH1-201ENST00000326470 KDM6BO15054 1643 aa22.99■■□□□ 1.27
SSH1-201ENST00000326470 MRS2Q9HD23 443 aa22.96■■□□□ 1.27
SSH1-201ENST00000326470 MIA2Q96PC5 1412 aa22.95■■□□□ 1.26
SSH1-201ENST00000326470 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
SSH1-201ENST00000326470 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
SSH1-201ENST00000326470 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
SSH1-201ENST00000326470 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.26
SSH1-201ENST00000326470 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
SSH1-201ENST00000326470 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
SSH1-201ENST00000326470 EPRSP07814 1512 aaKnown RBP22.88■■□□□ 1.25
SSH1-201ENST00000326470 SPATA31E1Q6ZUB1 1445 aa22.88■■□□□ 1.25
SSH1-201ENST00000326470 FOXD1Q16676 465 aa22.88■■□□□ 1.25
SSH1-201ENST00000326470 NBPF8Q3BBV2 869 aa22.88■■□□□ 1.25
SSH1-201ENST00000326470 MYT1LQ9UL68 1186 aa22.88■■□□□ 1.25
SSH1-201ENST00000326470 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
SSH1-201ENST00000326470 KIF7Q2M1P5 1343 aa22.86■■□□□ 1.25
SSH1-201ENST00000326470 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
SSH1-201ENST00000326470 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.24
SSH1-201ENST00000326470 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
SSH1-201ENST00000326470 CDK13Q14004 1512 aaKnown RBP22.8■■□□□ 1.24
SSH1-201ENST00000326470 DAPK1P53355 1430 aa22.79■■□□□ 1.24
SSH1-201ENST00000326470 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
SSH1-201ENST00000326470 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
SSH1-201ENST00000326470 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
SSH1-201ENST00000326470 ABCC5O15440 1437 aa22.75■■□□□ 1.23
SSH1-201ENST00000326470 SLC4A1APQ9BWU0 796 aaKnown RBP22.73■■□□□ 1.23
SSH1-201ENST00000326470 DNMT1P26358 1616 aaKnown RBP22.73■■□□□ 1.23
SSH1-201ENST00000326470 RNF123Q5XPI4 1314 aa22.73■■□□□ 1.23
SSH1-201ENST00000326470 DHX29Q7Z478 1369 aaKnown RBP22.72■■□□□ 1.23
SSH1-201ENST00000326470 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
SSH1-201ENST00000326470 NOP58Q9Y2X3 529 aaKnown RBP22.71■■□□□ 1.23
SSH1-201ENST00000326470 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
SSH1-201ENST00000326470 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.22
SSH1-201ENST00000326470 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
SSH1-201ENST00000326470 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
SSH1-201ENST00000326470 MBD5Q9P267 1494 aa22.66■■□□□ 1.22
SSH1-201ENST00000326470 DEKP35659 375 aaKnown RBP22.66■■□□□ 1.22
SSH1-201ENST00000326470 PZPP20742 1482 aa22.64■■□□□ 1.22
SSH1-201ENST00000326470 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
SSH1-201ENST00000326470 ARID4BQ4LE39 1312 aaPredicted RBP22.64■■□□□ 1.21
SSH1-201ENST00000326470 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.21
SSH1-201ENST00000326470 USP47Q96K76 1375 aa22.63■■□□□ 1.21
SSH1-201ENST00000326470 CCDC136Q96JN2 1154 aa22.62■■□□□ 1.21
SSH1-201ENST00000326470 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
SSH1-201ENST00000326470 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
SSH1-201ENST00000326470 PNISRQ8TF01 805 aaKnown RBP22.58■■□□□ 1.2
SSH1-201ENST00000326470 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
SSH1-201ENST00000326470 KIF14Q15058 1648 aa22.56■■□□□ 1.2
SSH1-201ENST00000326470 ANP32AP39687 249 aaKnown RBP22.56■■□□□ 1.2
SSH1-201ENST00000326470 KDM5CP41229 1560 aa22.55■■□□□ 1.2
SSH1-201ENST00000326470 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
SSH1-201ENST00000326470 NUP153P49790 1475 aaKnown RBP22.55■■□□□ 1.2
SSH1-201ENST00000326470 IPO9Q96P70 1041 aaKnown RBP22.55■■□□□ 1.2
SSH1-201ENST00000326470 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
SSH1-201ENST00000326470 CNGB1Q14028 1251 aaPredicted RBP22.53■■□□□ 1.2
SSH1-201ENST00000326470 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
SSH1-201ENST00000326470 FBLN2P98095 1184 aa22.52■■□□□ 1.2
SSH1-201ENST00000326470 NBR1Q14596 966 aa22.52■■□□□ 1.2
SSH1-201ENST00000326470 TMC1Q8TDI8 760 aa22.51■■□□□ 1.19
SSH1-201ENST00000326470 DISP1Q96F81 1524 aa22.51■■□□□ 1.19
SSH1-201ENST00000326470 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
SSH1-201ENST00000326470 CAMSAP2Q08AD1 1489 aa22.51■■□□□ 1.19
SSH1-201ENST00000326470 NUP160Q12769 1436 aa22.51■■□□□ 1.19
SSH1-201ENST00000326470 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
SSH1-201ENST00000326470 UHRF1BP1Q6BDS2 1440 aa22.5■■□□□ 1.19
SSH1-201ENST00000326470 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
SSH1-201ENST00000326470 ADGBQ8N7X0 1667 aa22.49■■□□□ 1.19
SSH1-201ENST00000326470 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
SSH1-201ENST00000326470 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
SSH1-201ENST00000326470 PKD2Q13563 968 aa22.48■■□□□ 1.19
SSH1-201ENST00000326470 RALGAPBQ86X10 1494 aa22.47■■□□□ 1.19
SSH1-201ENST00000326470 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
SSH1-201ENST00000326470 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
SSH1-201ENST00000326470 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
SSH1-201ENST00000326470 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
SSH1-201ENST00000326470 BRD4O60885 1362 aaPredicted RBP22.44■■□□□ 1.18
SSH1-201ENST00000326470 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
SSH1-201ENST00000326470 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
SSH1-201ENST00000326470 ITSN2Q9NZM3 1697 aa22.44■■□□□ 1.18
SSH1-201ENST00000326470 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
SSH1-201ENST00000326470 GPATCH8Q9UKJ3 1502 aaKnown RBP22.43■■□□□ 1.18
SSH1-201ENST00000326470 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
SSH1-201ENST00000326470 CARD11Q9BXL7 1154 aa22.41■■□□□ 1.18
SSH1-201ENST00000326470 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
SSH1-201ENST00000326470 SENP3-EIF4A1A0A087X0R7 540 aa22.41■■□□□ 1.18
SSH1-201ENST00000326470 CROCC2H7BZ55 1655 aa22.4■■□□□ 1.18
SSH1-201ENST00000326470 RALBP1Q15311 655 aa22.4■■□□□ 1.18
SSH1-201ENST00000326470 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
SSH1-201ENST00000326470 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
SSH1-201ENST00000326470 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
SSH1-201ENST00000326470 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.17
SSH1-201ENST00000326470 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
SSH1-201ENST00000326470 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
SSH1-201ENST00000326470 TCERG1O14776 1098 aaKnown RBP22.35■■□□□ 1.17
SSH1-201ENST00000326470 ZNF777Q9ULD5 760 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms