RNA–Protein interactions for RNA: ENST00000325823.11

PDXDC1-201, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-201ENST00000325823 POLA2Q14181 598 aa10.95□□□□□ -0.66
PDXDC1-201ENST00000325823 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
PDXDC1-201ENST00000325823 SUPT6HQ7KZ85 1726 aaKnown RBP10.93□□□□□ -0.66
PDXDC1-201ENST00000325823 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
PDXDC1-201ENST00000325823 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
PDXDC1-201ENST00000325823 FGD6Q6ZV73 1430 aa10.92□□□□□ -0.66
PDXDC1-201ENST00000325823 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
PDXDC1-201ENST00000325823 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
PDXDC1-201ENST00000325823 ITGAEP38570 1179 aa10.91□□□□□ -0.66
PDXDC1-201ENST00000325823 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
PDXDC1-201ENST00000325823 SYNJ2O15056 1496 aa10.91□□□□□ -0.66
PDXDC1-201ENST00000325823 LRRIQ1Q96JM4 1722 aa10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 NCOA2Q15596 1464 aa10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 ABCB7O75027 752 aa10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
PDXDC1-201ENST00000325823 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
PDXDC1-201ENST00000325823 EPRSP07814 1512 aaKnown RBP10.89□□□□□ -0.67
PDXDC1-201ENST00000325823 KIAA0556O60303 1618 aa10.88□□□□□ -0.67
PDXDC1-201ENST00000325823 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
PDXDC1-201ENST00000325823 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
PDXDC1-201ENST00000325823 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
PDXDC1-201ENST00000325823 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
PDXDC1-201ENST00000325823 DISP1Q96F81 1524 aa10.86□□□□□ -0.67
PDXDC1-201ENST00000325823 CARMIL2Q6F5E8 1435 aa10.85□□□□□ -0.67
PDXDC1-201ENST00000325823 MIA2Q96PC5 1412 aa10.85□□□□□ -0.67
PDXDC1-201ENST00000325823 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
PDXDC1-201ENST00000325823 NUP160Q12769 1436 aa10.84□□□□□ -0.67
PDXDC1-201ENST00000325823 CDK11AQ9UQ88 783 aaPredicted RBP10.84□□□□□ -0.67
PDXDC1-201ENST00000325823 TCOF1Q13428 1488 aaKnown RBP10.84□□□□□ -0.67
PDXDC1-201ENST00000325823 PTPN23Q9H3S7 1636 aa10.84□□□□□ -0.67
PDXDC1-201ENST00000325823 KDM2AQ9Y2K7 1162 aa10.83□□□□□ -0.68
PDXDC1-201ENST00000325823 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
PDXDC1-201ENST00000325823 HFM1A2PYH4 1435 aa10.83□□□□□ -0.68
PDXDC1-201ENST00000325823 MAPKBP1O60336 1514 aa10.82□□□□□ -0.68
PDXDC1-201ENST00000325823 MAGI3Q5TCQ9 1506 aa10.82□□□□□ -0.68
PDXDC1-201ENST00000325823 CEP170Q5SW79 1584 aa10.82□□□□□ -0.68
PDXDC1-201ENST00000325823 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
PDXDC1-201ENST00000325823 SPRYD3Q8NCJ5 442 aa10.8□□□□□ -0.68
PDXDC1-201ENST00000325823 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
PDXDC1-201ENST00000325823 TPRNQ4KMQ1 711 aa10.79□□□□□ -0.68
PDXDC1-201ENST00000325823 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
PDXDC1-201ENST00000325823 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
PDXDC1-201ENST00000325823 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
PDXDC1-201ENST00000325823 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDXDC1-201ENST00000325823 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
PDXDC1-201ENST00000325823 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
PDXDC1-201ENST00000325823 NAIPQ13075 1403 aa10.76□□□□□ -0.69
PDXDC1-201ENST00000325823 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
PDXDC1-201ENST00000325823 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
PDXDC1-201ENST00000325823 TROQ12816 1431 aaPredicted RBP10.75□□□□□ -0.69
PDXDC1-201ENST00000325823 PTPRKQ15262 1439 aa10.75□□□□□ -0.69
PDXDC1-201ENST00000325823 GCC2Q8IWJ2 1684 aa10.74□□□□□ -0.69
PDXDC1-201ENST00000325823 ROCK1Q13464 1354 aa10.74□□□□□ -0.69
PDXDC1-201ENST00000325823 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
PDXDC1-201ENST00000325823 ITSN2Q9NZM3 1697 aa10.73□□□□□ -0.69
PDXDC1-201ENST00000325823 RGL2O15211 777 aa10.71□□□□□ -0.69
PDXDC1-201ENST00000325823 ABCA8O94911 1581 aa10.71□□□□□ -0.69
PDXDC1-201ENST00000325823 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
PDXDC1-201ENST00000325823 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
PDXDC1-201ENST00000325823 PLB1Q6P1J6 1458 aa10.7□□□□□ -0.7
PDXDC1-201ENST00000325823 SPDYE2BA6NHP3 402 aa10.7□□□□□ -0.7
PDXDC1-201ENST00000325823 SPDYE6P0CI01 402 aa10.7□□□□□ -0.7
PDXDC1-201ENST00000325823 SPDYE2Q495Y8 402 aa10.7□□□□□ -0.7
PDXDC1-201ENST00000325823 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
PDXDC1-201ENST00000325823 DAPK1P53355 1430 aa10.69□□□□□ -0.7
PDXDC1-201ENST00000325823 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
PDXDC1-201ENST00000325823 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
PDXDC1-201ENST00000325823 NEUROD1Q13562 356 aa10.68□□□□□ -0.7
PDXDC1-201ENST00000325823 SIN3AQ96ST3 1273 aa10.68□□□□□ -0.7
PDXDC1-201ENST00000325823 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 TONSLQ96HA7 1378 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 ARID3CA6NKF2 412 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 MIER1Q8N108 512 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 ABCC5O15440 1437 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 PTPRGP23470 1445 aa10.67□□□□□ -0.7
PDXDC1-201ENST00000325823 KIF14Q15058 1648 aa10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 RRP7BPQ9NSQ0 103 aa10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 CFDP1Q9UEE9 299 aaPredicted RBP10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 GPATCH8Q9UKJ3 1502 aaKnown RBP10.66□□□□□ -0.7
PDXDC1-201ENST00000325823 CHIC2Q9UKJ5 165 aa10.65□□□□□ -0.7
PDXDC1-201ENST00000325823 ATP10BO94823 1461 aa10.65□□□□□ -0.7
PDXDC1-201ENST00000325823 SHROOM2Q13796 1616 aa10.65□□□□□ -0.7
PDXDC1-201ENST00000325823 CHD1O14646 1710 aa10.64□□□□□ -0.71
PDXDC1-201ENST00000325823 CAMSAP2Q08AD1 1489 aa10.64□□□□□ -0.71
PDXDC1-201ENST00000325823 ADGBQ8N7X0 1667 aa10.63□□□□□ -0.71
PDXDC1-201ENST00000325823 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
PDXDC1-201ENST00000325823 POTEHQ6S545 545 aa10.63□□□□□ -0.71
PDXDC1-201ENST00000325823 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
PDXDC1-201ENST00000325823 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
PDXDC1-201ENST00000325823 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
PDXDC1-201ENST00000325823 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
PDXDC1-201ENST00000325823 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
PDXDC1-201ENST00000325823 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
PDXDC1-201ENST00000325823 NBR1Q14596 966 aa10.6□□□□□ -0.71
PDXDC1-201ENST00000325823 ANKRD30AQ9BXX3 1397 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms