RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ROCK1Q13464 1354 aa28.09■■■□□ 2.09
CHMP6-201ENST00000325167 KIF14Q15058 1648 aa28.08■■■□□ 2.09
CHMP6-201ENST00000325167 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
CHMP6-201ENST00000325167 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
CHMP6-201ENST00000325167 DAPK1P53355 1430 aa28.05■■■□□ 2.08
CHMP6-201ENST00000325167 GPATCH8Q9UKJ3 1502 aaKnown RBP28.05■■■□□ 2.08
CHMP6-201ENST00000325167 CFDP1Q9UEE9 299 aaPredicted RBP28.02■■■□□ 2.08
CHMP6-201ENST00000325167 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
CHMP6-201ENST00000325167 FAM69CQ0P6D2 419 aa28.01■■■□□ 2.07
CHMP6-201ENST00000325167 ABCC5O15440 1437 aa27.99■■■□□ 2.07
CHMP6-201ENST00000325167 DIP2BQ9P265 1576 aa27.99■■■□□ 2.07
CHMP6-201ENST00000325167 CAMSAP2Q08AD1 1489 aa27.98■■■□□ 2.07
CHMP6-201ENST00000325167 ABCC2Q92887 1545 aa27.96■■■□□ 2.07
CHMP6-201ENST00000325167 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
CHMP6-201ENST00000325167 CHIC2Q9UKJ5 165 aa27.93■■■□□ 2.06
CHMP6-201ENST00000325167 UHRF1BP1LA0JNW5 1464 aa27.9■■■□□ 2.06
CHMP6-201ENST00000325167 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.06
CHMP6-201ENST00000325167 ZNF644Q9H582 1327 aaPredicted RBP27.88■■■□□ 2.05
CHMP6-201ENST00000325167 ADGRL2O95490 1459 aa27.87■■■□□ 2.05
CHMP6-201ENST00000325167 ADGBQ8N7X0 1667 aa27.86■■■□□ 2.05
CHMP6-201ENST00000325167 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
CHMP6-201ENST00000325167 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
CHMP6-201ENST00000325167 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
CHMP6-201ENST00000325167 TSPOAP1O95153 1857 aa27.83■■■□□ 2.05
CHMP6-201ENST00000325167 SIN3AQ96ST3 1273 aa27.82■■■□□ 2.04
CHMP6-201ENST00000325167 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
CHMP6-201ENST00000325167 KDM5BQ9UGL1 1544 aa27.8■■■□□ 2.04
CHMP6-201ENST00000325167 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
CHMP6-201ENST00000325167 TRIM52Q96A61 297 aa27.79■■■□□ 2.04
CHMP6-201ENST00000325167 ZCCHC11Q5TAX3 1644 aaKnown RBP27.79■■■□□ 2.04
CHMP6-201ENST00000325167 NCOA1Q15788 1441 aa27.79■■■□□ 2.04
CHMP6-201ENST00000325167 ZNF777Q9ULD5 760 aaPredicted RBP27.78■■■□□ 2.04
CHMP6-201ENST00000325167 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
CHMP6-201ENST00000325167 PREX2Q70Z35 1606 aa27.78■■■□□ 2.04
CHMP6-201ENST00000325167 TONSLQ96HA7 1378 aa27.77■■■□□ 2.04
CHMP6-201ENST00000325167 RSPH4AQ5TD94 716 aa27.77■■■□□ 2.04
CHMP6-201ENST00000325167 KDM6BO15054 1643 aa27.76■■■□□ 2.03
CHMP6-201ENST00000325167 MPHOSPH9Q99550 1183 aa27.72■■■□□ 2.03
CHMP6-201ENST00000325167 PPP1R15AO75807 674 aaPredicted RBP27.72■■■□□ 2.03
CHMP6-201ENST00000325167 TSPY4P0CV99 314 aa27.7■■■□□ 2.02
CHMP6-201ENST00000325167 TSPY10P0CW01 314 aa27.7■■■□□ 2.02
CHMP6-201ENST00000325167 PLEKHH2Q8IVE3 1493 aa27.69■■■□□ 2.02
CHMP6-201ENST00000325167 C9orf84Q5VXU9 1444 aa27.69■■■□□ 2.02
CHMP6-201ENST00000325167 GLI2P10070 1586 aa27.69■■■□□ 2.02
CHMP6-201ENST00000325167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.68■■■□□ 2.02
CHMP6-201ENST00000325167 CDC42BPBQ9Y5S2 1711 aa27.67■■■□□ 2.02
CHMP6-201ENST00000325167 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
CHMP6-201ENST00000325167 DENND4BO75064 1496 aaPredicted RBP27.66■■■□□ 2.02
CHMP6-201ENST00000325167 MBD5Q9P267 1494 aa27.65■■■□□ 2.02
CHMP6-201ENST00000325167 PPRC1Q5VV67 1664 aaKnown RBP27.64■■■□□ 2.02
CHMP6-201ENST00000325167 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.02
CHMP6-201ENST00000325167 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.02
CHMP6-201ENST00000325167 TTC37Q6PGP7 1564 aa27.64■■■□□ 2.01
CHMP6-201ENST00000325167 ARHGAP5Q13017 1502 aa27.63■■■□□ 2.01
CHMP6-201ENST00000325167 ANKRD50Q9ULJ7 1429 aa27.62■■■□□ 2.01
CHMP6-201ENST00000325167 KIAA1107Q9UPP5 1409 aa27.62■■■□□ 2.01
CHMP6-201ENST00000325167 WDR7Q9Y4E6 1490 aa27.62■■■□□ 2.01
CHMP6-201ENST00000325167 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
CHMP6-201ENST00000325167 MAST1Q9Y2H9 1570 aa27.58■■■□□ 2.01
CHMP6-201ENST00000325167 SLC4A1APQ9BWU0 796 aaKnown RBP27.57■■■□□ 2
CHMP6-201ENST00000325167 PLCH2O75038 1416 aa27.56■■■□□ 2
CHMP6-201ENST00000325167 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
CHMP6-201ENST00000325167 ANKRD30BQ9BXX2 1392 aa27.56■■■□□ 2
CHMP6-201ENST00000325167 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
CHMP6-201ENST00000325167 HNRNPMP52272 730 aaKnown RBP eCLIP27.55■■■□□ 2
CHMP6-201ENST00000325167 PZPP20742 1482 aa27.54■■■□□ 2
CHMP6-201ENST00000325167 KIF15Q9NS87 1388 aa27.53■■■□□ 2
CHMP6-201ENST00000325167 KCNH8Q96L42 1107 aa27.52■■■□□ 2
CHMP6-201ENST00000325167 KDM5DQ9BY66 1539 aa27.52■■■□□ 2
CHMP6-201ENST00000325167 SYCP2Q9BX26 1530 aa27.51■■□□□ 1.99
CHMP6-201ENST00000325167 RPRD2Q5VT52 1461 aaKnown RBP27.51■■□□□ 1.99
CHMP6-201ENST00000325167 EFCAB2Q5VUJ9 269 aa27.5■■□□□ 1.99
CHMP6-201ENST00000325167 MIER1Q8N108 512 aa27.46■■□□□ 1.99
CHMP6-201ENST00000325167 TEX14Q8IWB6 1497 aa27.45■■□□□ 1.99
CHMP6-201ENST00000325167 PLXNC1O60486 1568 aa27.45■■□□□ 1.98
CHMP6-201ENST00000325167 COL17A1Q9UMD9 1497 aaPredicted RBP27.44■■□□□ 1.98
CHMP6-201ENST00000325167 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
CHMP6-201ENST00000325167 CD109Q6YHK3 1445 aa27.41■■□□□ 1.98
CHMP6-201ENST00000325167 NUP155O75694 1391 aa27.41■■□□□ 1.98
CHMP6-201ENST00000325167 ABCC1P33527 1531 aa27.4■■□□□ 1.98
CHMP6-201ENST00000325167 FOXD1Q16676 465 aa27.37■■□□□ 1.97
CHMP6-201ENST00000325167 ABCA9Q8IUA7 1624 aa27.36■■□□□ 1.97
CHMP6-201ENST00000325167 PKD2Q13563 968 aa27.36■■□□□ 1.97
CHMP6-201ENST00000325167 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
CHMP6-201ENST00000325167 L3MBTL2Q969R5 705 aa27.34■■□□□ 1.97
CHMP6-201ENST00000325167 ARHGEF12Q9NZN5 1544 aa27.32■■□□□ 1.96
CHMP6-201ENST00000325167 RTEL1-TNFRSF6BF6WH68 1400 aa27.32■■□□□ 1.96
CHMP6-201ENST00000325167 ERBINQ96RT1 1412 aa27.32■■□□□ 1.96
CHMP6-201ENST00000325167 UNC13BO14795 1591 aa27.32■■□□□ 1.96
CHMP6-201ENST00000325167 FAM135AQ9P2D6 1515 aa27.26■■□□□ 1.96
CHMP6-201ENST00000325167 KDM4FA0A1W2PPD8 638 aa27.26■■□□□ 1.95
CHMP6-201ENST00000325167 FANCAO15360 1455 aa27.24■■□□□ 1.95
CHMP6-201ENST00000325167 TRAPPC8Q9Y2L5 1435 aa27.22■■□□□ 1.95
CHMP6-201ENST00000325167 EIF4G2P78344 907 aaKnown RBP eCLIP27.22■■□□□ 1.95
CHMP6-201ENST00000325167 SPAG9O60271 1321 aaKnown RBP27.21■■□□□ 1.95
CHMP6-201ENST00000325167 MAGI2Q86UL8 1455 aa27.21■■□□□ 1.95
CHMP6-201ENST00000325167 IQGAP3Q86VI3 1631 aa27.2■■□□□ 1.94
CHMP6-201ENST00000325167 ZFYVE16Q7Z3T8 1539 aa27.17■■□□□ 1.94
CHMP6-201ENST00000325167 CFAP74Q9C0B2 1584 aa27.16■■□□□ 1.94
CHMP6-201ENST00000325167 DDX10Q13206 875 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms