RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
CCDC149-201ENST00000324309 PNNQ9H307 717 aaKnown RBP17.13■□□□□ 0.33
CCDC149-201ENST00000324309 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
CCDC149-201ENST00000324309 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
CCDC149-201ENST00000324309 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
CCDC149-201ENST00000324309 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
CCDC149-201ENST00000324309 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
CCDC149-201ENST00000324309 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
CCDC149-201ENST00000324309 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
CCDC149-201ENST00000324309 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.33
CCDC149-201ENST00000324309 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
CCDC149-201ENST00000324309 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
CCDC149-201ENST00000324309 ARHGAP5Q13017 1502 aa17.06■□□□□ 0.32
CCDC149-201ENST00000324309 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
CCDC149-201ENST00000324309 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC149-201ENST00000324309 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
CCDC149-201ENST00000324309 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
CCDC149-201ENST00000324309 RAB3GAP2Q9H2M9 1393 aa17.03■□□□□ 0.32
CCDC149-201ENST00000324309 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
CCDC149-201ENST00000324309 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
CCDC149-201ENST00000324309 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
CCDC149-201ENST00000324309 FGD6Q6ZV73 1430 aa17.02■□□□□ 0.31
CCDC149-201ENST00000324309 CCDC144AA2RUR9 1427 aa17■□□□□ 0.31
CCDC149-201ENST00000324309 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
CCDC149-201ENST00000324309 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
CCDC149-201ENST00000324309 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
CCDC149-201ENST00000324309 SRPK2P78362 688 aaKnown RBP16.95■□□□□ 0.3
CCDC149-201ENST00000324309 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
CCDC149-201ENST00000324309 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
CCDC149-201ENST00000324309 WDR62O43379 1518 aa16.94■□□□□ 0.3
CCDC149-201ENST00000324309 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
CCDC149-201ENST00000324309 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
CCDC149-201ENST00000324309 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
CCDC149-201ENST00000324309 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCDC149-201ENST00000324309 PLB1Q6P1J6 1458 aa16.9■□□□□ 0.3
CCDC149-201ENST00000324309 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.3
CCDC149-201ENST00000324309 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
CCDC149-201ENST00000324309 CHMP4AQ9BY43 222 aa16.89■□□□□ 0.29
CCDC149-201ENST00000324309 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
CCDC149-201ENST00000324309 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
CCDC149-201ENST00000324309 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
CCDC149-201ENST00000324309 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
CCDC149-201ENST00000324309 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
CCDC149-201ENST00000324309 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
CCDC149-201ENST00000324309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC149-201ENST00000324309 ANKRD50Q9ULJ7 1429 aa16.86■□□□□ 0.29
CCDC149-201ENST00000324309 PHLDB1Q86UU1 1377 aa16.86■□□□□ 0.29
CCDC149-201ENST00000324309 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
CCDC149-201ENST00000324309 KIF14Q15058 1648 aa16.86■□□□□ 0.29
CCDC149-201ENST00000324309 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
CCDC149-201ENST00000324309 EPRSP07814 1512 aaKnown RBP16.85■□□□□ 0.29
CCDC149-201ENST00000324309 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.29
CCDC149-201ENST00000324309 TIAM1Q13009 1591 aa16.83■□□□□ 0.29
CCDC149-201ENST00000324309 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
CCDC149-201ENST00000324309 TEX14Q8IWB6 1497 aa16.82■□□□□ 0.28
CCDC149-201ENST00000324309 MS4A1P11836 297 aa16.82■□□□□ 0.28
CCDC149-201ENST00000324309 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
CCDC149-201ENST00000324309 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
CCDC149-201ENST00000324309 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
CCDC149-201ENST00000324309 STK26Q9P289 416 aa16.8■□□□□ 0.28
CCDC149-201ENST00000324309 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
CCDC149-201ENST00000324309 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
CCDC149-201ENST00000324309 A0A0G2JS52 829 aa16.8■□□□□ 0.28
CCDC149-201ENST00000324309 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
CCDC149-201ENST00000324309 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
CCDC149-201ENST00000324309 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
CCDC149-201ENST00000324309 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
CCDC149-201ENST00000324309 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
CCDC149-201ENST00000324309 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
CCDC149-201ENST00000324309 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
CCDC149-201ENST00000324309 RALBP1Q15311 655 aa16.77■□□□□ 0.28
CCDC149-201ENST00000324309 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.28
CCDC149-201ENST00000324309 UPF2Q9HAU5 1272 aaKnown RBP16.75■□□□□ 0.27
CCDC149-201ENST00000324309 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
CCDC149-201ENST00000324309 CCDC141Q6ZP82 1450 aa16.74■□□□□ 0.27
CCDC149-201ENST00000324309 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
CCDC149-201ENST00000324309 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
CCDC149-201ENST00000324309 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
CCDC149-201ENST00000324309 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
CCDC149-201ENST00000324309 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
CCDC149-201ENST00000324309 NGDNQ8NEJ9 315 aaKnown RBP16.72■□□□□ 0.27
CCDC149-201ENST00000324309 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
CCDC149-201ENST00000324309 UGGT2Q9NYU1 1516 aa16.71■□□□□ 0.27
CCDC149-201ENST00000324309 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
CCDC149-201ENST00000324309 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.27
CCDC149-201ENST00000324309 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
CCDC149-201ENST00000324309 FOXD1Q16676 465 aa16.69■□□□□ 0.26
CCDC149-201ENST00000324309 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
CCDC149-201ENST00000324309 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
CCDC149-201ENST00000324309 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
CCDC149-201ENST00000324309 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
CCDC149-201ENST00000324309 MYT1Q01538 1121 aa16.68■□□□□ 0.26
CCDC149-201ENST00000324309 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
CCDC149-201ENST00000324309 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
CCDC149-201ENST00000324309 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC149-201ENST00000324309 DAPK1P53355 1430 aa16.67■□□□□ 0.26
CCDC149-201ENST00000324309 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
CCDC149-201ENST00000324309 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
CCDC149-201ENST00000324309 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
CCDC149-201ENST00000324309 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms