RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
SEC24A-201ENST00000322887 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
SEC24A-201ENST00000322887 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
SEC24A-201ENST00000322887 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
SEC24A-201ENST00000322887 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
SEC24A-201ENST00000322887 MAGI3Q5TCQ9 1506 aa17.3■□□□□ 0.36
SEC24A-201ENST00000322887 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
SEC24A-201ENST00000322887 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
SEC24A-201ENST00000322887 ARID3CA6NKF2 412 aa17.27■□□□□ 0.36
SEC24A-201ENST00000322887 KIF14Q15058 1648 aa17.23■□□□□ 0.35
SEC24A-201ENST00000322887 MSH5O43196 834 aa17.23■□□□□ 0.35
SEC24A-201ENST00000322887 SUPT6HQ7KZ85 1726 aaKnown RBP17.22■□□□□ 0.35
SEC24A-201ENST00000322887 GLI2P10070 1586 aa17.22■□□□□ 0.35
SEC24A-201ENST00000322887 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
SEC24A-201ENST00000322887 ABCC10Q5T3U5 1492 aa17.2■□□□□ 0.34
SEC24A-201ENST00000322887 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
SEC24A-201ENST00000322887 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
SEC24A-201ENST00000322887 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
SEC24A-201ENST00000322887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
SEC24A-201ENST00000322887 NEFLP07196 543 aa17.17■□□□□ 0.34
SEC24A-201ENST00000322887 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
SEC24A-201ENST00000322887 ARAP3Q8WWN8 1544 aa17.15■□□□□ 0.34
SEC24A-201ENST00000322887 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
SEC24A-201ENST00000322887 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
SEC24A-201ENST00000322887 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
SEC24A-201ENST00000322887 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
SEC24A-201ENST00000322887 MIA2Q96PC5 1412 aa17.11■□□□□ 0.33
SEC24A-201ENST00000322887 ANP32CO43423 234 aa17.11■□□□□ 0.33
SEC24A-201ENST00000322887 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
SEC24A-201ENST00000322887 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
SEC24A-201ENST00000322887 PLCH2O75038 1416 aa17.11■□□□□ 0.33
SEC24A-201ENST00000322887 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
SEC24A-201ENST00000322887 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
SEC24A-201ENST00000322887 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
SEC24A-201ENST00000322887 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
SEC24A-201ENST00000322887 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
SEC24A-201ENST00000322887 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
SEC24A-201ENST00000322887 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC24A-201ENST00000322887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEC24A-201ENST00000322887 FGD6Q6ZV73 1430 aa17.06■□□□□ 0.32
SEC24A-201ENST00000322887 SENP3-EIF4A1A0A087X0R7 540 aa17.05■□□□□ 0.32
SEC24A-201ENST00000322887 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
SEC24A-201ENST00000322887 CDC42BPBQ9Y5S2 1711 aa17.03■□□□□ 0.32
SEC24A-201ENST00000322887 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
SEC24A-201ENST00000322887 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
SEC24A-201ENST00000322887 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
SEC24A-201ENST00000322887 NEO1Q92859 1461 aa17.02■□□□□ 0.32
SEC24A-201ENST00000322887 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.31
SEC24A-201ENST00000322887 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.31
SEC24A-201ENST00000322887 TEX14Q8IWB6 1497 aa17.02■□□□□ 0.31
SEC24A-201ENST00000322887 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
SEC24A-201ENST00000322887 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
SEC24A-201ENST00000322887 FANCAO15360 1455 aa17■□□□□ 0.31
SEC24A-201ENST00000322887 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
SEC24A-201ENST00000322887 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
SEC24A-201ENST00000322887 PPRC1Q5VV67 1664 aaKnown RBP16.98■□□□□ 0.31
SEC24A-201ENST00000322887 SAMD9LQ8IVG5 1584 aa16.97■□□□□ 0.31
SEC24A-201ENST00000322887 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
SEC24A-201ENST00000322887 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
SEC24A-201ENST00000322887 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
SEC24A-201ENST00000322887 TONSLQ96HA7 1378 aa16.95■□□□□ 0.3
SEC24A-201ENST00000322887 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
SEC24A-201ENST00000322887 ABCC1P33527 1531 aa16.95■□□□□ 0.3
SEC24A-201ENST00000322887 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
SEC24A-201ENST00000322887 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
SEC24A-201ENST00000322887 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
SEC24A-201ENST00000322887 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
SEC24A-201ENST00000322887 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
SEC24A-201ENST00000322887 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
SEC24A-201ENST00000322887 PTPRKQ15262 1439 aa16.9■□□□□ 0.3
SEC24A-201ENST00000322887 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
SEC24A-201ENST00000322887 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.29
SEC24A-201ENST00000322887 ARHGEF12Q9NZN5 1544 aa16.89■□□□□ 0.29
SEC24A-201ENST00000322887 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
SEC24A-201ENST00000322887 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
SEC24A-201ENST00000322887 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
SEC24A-201ENST00000322887 FOXD1Q16676 465 aa16.88■□□□□ 0.29
SEC24A-201ENST00000322887 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
SEC24A-201ENST00000322887 SCAPERQ9BY12 1400 aa16.88■□□□□ 0.29
SEC24A-201ENST00000322887 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
SEC24A-201ENST00000322887 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
SEC24A-201ENST00000322887 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
SEC24A-201ENST00000322887 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
SEC24A-201ENST00000322887 DAPK1P53355 1430 aa16.86■□□□□ 0.29
SEC24A-201ENST00000322887 ABCC5O15440 1437 aa16.86■□□□□ 0.29
SEC24A-201ENST00000322887 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
SEC24A-201ENST00000322887 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
SEC24A-201ENST00000322887 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
SEC24A-201ENST00000322887 RRP7BPQ9NSQ0 103 aa16.85■□□□□ 0.29
SEC24A-201ENST00000322887 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
SEC24A-201ENST00000322887 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
SEC24A-201ENST00000322887 KDM5CP41229 1560 aa16.84■□□□□ 0.29
SEC24A-201ENST00000322887 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
SEC24A-201ENST00000322887 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.29
SEC24A-201ENST00000322887 HNRNPMP52272 730 aaKnown RBP eCLIP16.83■□□□□ 0.28
SEC24A-201ENST00000322887 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
SEC24A-201ENST00000322887 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
SEC24A-201ENST00000322887 NBR1Q14596 966 aa16.82■□□□□ 0.28
SEC24A-201ENST00000322887 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
SEC24A-201ENST00000322887 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms