RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 MIER1Q8N108 512 aa12.22□□□□□ -0.45
COL12A1-201ENST00000322507 HSCBQ8IWL3 235 aa12.22□□□□□ -0.45
COL12A1-201ENST00000322507 CARD11Q9BXL7 1154 aa12.21□□□□□ -0.45
COL12A1-201ENST00000322507 HSP90B1P14625 803 aaKnown RBP12.21□□□□□ -0.45
COL12A1-201ENST00000322507 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
COL12A1-201ENST00000322507 CCDC34Q96HJ3 373 aa12.21□□□□□ -0.46
COL12A1-201ENST00000322507 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
COL12A1-201ENST00000322507 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
COL12A1-201ENST00000322507 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
COL12A1-201ENST00000322507 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
COL12A1-201ENST00000322507 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
COL12A1-201ENST00000322507 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
COL12A1-201ENST00000322507 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
COL12A1-201ENST00000322507 FGD1P98174 961 aa12.19□□□□□ -0.46
COL12A1-201ENST00000322507 TMF1P82094 1093 aa12.18□□□□□ -0.46
COL12A1-201ENST00000322507 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
COL12A1-201ENST00000322507 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
COL12A1-201ENST00000322507 TSPYL1Q9H0U9 437 aa12.17□□□□□ -0.46
COL12A1-201ENST00000322507 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
COL12A1-201ENST00000322507 HMGB1P1B2RPK0 211 aaPredicted RBP12.15□□□□□ -0.46
COL12A1-201ENST00000322507 GBP4Q96PP9 640 aa12.15□□□□□ -0.46
COL12A1-201ENST00000322507 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
COL12A1-201ENST00000322507 RRP7BPQ9NSQ0 103 aa12.15□□□□□ -0.46
COL12A1-201ENST00000322507 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
COL12A1-201ENST00000322507 KCNJ4P48050 445 aa12.15□□□□□ -0.46
COL12A1-201ENST00000322507 FMN1Q68DA7 1419 aa12.15□□□□□ -0.47
COL12A1-201ENST00000322507 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
COL12A1-201ENST00000322507 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
COL12A1-201ENST00000322507 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
COL12A1-201ENST00000322507 ROCK2O75116 1388 aaKnown RBP12.14□□□□□ -0.47
COL12A1-201ENST00000322507 PHF14O94880 888 aa12.13□□□□□ -0.47
COL12A1-201ENST00000322507 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-201ENST00000322507 USP8P40818 1118 aa12.13□□□□□ -0.47
COL12A1-201ENST00000322507 POGKQ9P215 609 aa12.13□□□□□ -0.47
COL12A1-201ENST00000322507 ARID3AQ99856 593 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 KTN1Q86UP2 1357 aaKnown RBP12.12□□□□□ -0.47
COL12A1-201ENST00000322507 CCDC70Q6NSX1 233 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 CCDC9Q9Y3X0 531 aaKnown RBP12.12□□□□□ -0.47
COL12A1-201ENST00000322507 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
COL12A1-201ENST00000322507 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-201ENST00000322507 RALBP1Q15311 655 aa12.11□□□□□ -0.47
COL12A1-201ENST00000322507 TPM4P67936 248 aa12.1□□□□□ -0.47
COL12A1-201ENST00000322507 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
COL12A1-201ENST00000322507 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
COL12A1-201ENST00000322507 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
COL12A1-201ENST00000322507 KIAA1211Q6ZU35 1233 aa12.09□□□□□ -0.47
COL12A1-201ENST00000322507 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
COL12A1-201ENST00000322507 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
COL12A1-201ENST00000322507 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
COL12A1-201ENST00000322507 SSR1P43307 286 aaKnown RBP12.08□□□□□ -0.48
COL12A1-201ENST00000322507 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
COL12A1-201ENST00000322507 ACBD3Q9H3P7 528 aa12.07□□□□□ -0.48
COL12A1-201ENST00000322507 ZRSR2Q15696 482 aaKnown RBP12.07□□□□□ -0.48
COL12A1-201ENST00000322507 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
COL12A1-201ENST00000322507 NPHP1O15259 732 aa12.06□□□□□ -0.48
COL12A1-201ENST00000322507 A0A0G2JS52 829 aa12.05□□□□□ -0.48
COL12A1-201ENST00000322507 CDR1P51861 262 aa12.05□□□□□ -0.48
COL12A1-201ENST00000322507 TPM2P07951 284 aa12.05□□□□□ -0.48
COL12A1-201ENST00000322507 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
COL12A1-201ENST00000322507 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
COL12A1-201ENST00000322507 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
COL12A1-201ENST00000322507 KIF3AQ9Y496 699 aa12.04□□□□□ -0.48
COL12A1-201ENST00000322507 SETSIPP0DME0 302 aa12.04□□□□□ -0.48
COL12A1-201ENST00000322507 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
COL12A1-201ENST00000322507 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
COL12A1-201ENST00000322507 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-201ENST00000322507 EIF4G1Q04637 1599 aaKnown RBP12.04□□□□□ -0.48
COL12A1-201ENST00000322507 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-201ENST00000322507 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
COL12A1-201ENST00000322507 AK7Q96M32 723 aa12.02□□□□□ -0.48
COL12A1-201ENST00000322507 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
COL12A1-201ENST00000322507 RGL3Q3MIN7 710 aa12.02□□□□□ -0.48
COL12A1-201ENST00000322507 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.48
COL12A1-201ENST00000322507 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.48
COL12A1-201ENST00000322507 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
COL12A1-201ENST00000322507 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 RGS3P49796 1198 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 SPAG9O60271 1321 aaKnown RBP12.01□□□□□ -0.49
COL12A1-201ENST00000322507 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 LMOD3Q0VAK6 560 aa12.01□□□□□ -0.49
COL12A1-201ENST00000322507 ARGLU1Q9NWB6 273 aaPredicted RBP12□□□□□ -0.49
COL12A1-201ENST00000322507 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
COL12A1-201ENST00000322507 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
COL12A1-201ENST00000322507 H0YHG0 523 aa12□□□□□ -0.49
COL12A1-201ENST00000322507 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
COL12A1-201ENST00000322507 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
COL12A1-201ENST00000322507 ANKRD30AQ9BXX3 1397 aa11.99□□□□□ -0.49
COL12A1-201ENST00000322507 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
COL12A1-201ENST00000322507 TPM3P06753 285 aa11.99□□□□□ -0.49
COL12A1-201ENST00000322507 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-201ENST00000322507 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
COL12A1-201ENST00000322507 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
COL12A1-201ENST00000322507 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
COL12A1-201ENST00000322507 CUX2O14529 1486 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms