RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
EEA1-201ENST00000322349 FRAT2O75474 233 aaPredicted RBP13.04□□□□□ -0.32
EEA1-201ENST00000322349 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
EEA1-201ENST00000322349 EVA1CP58658 441 aa13.02□□□□□ -0.33
EEA1-201ENST00000322349 MIER1Q8N108 512 aa13.02□□□□□ -0.33
EEA1-201ENST00000322349 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
EEA1-201ENST00000322349 CLIP1P30622 1438 aa13.01□□□□□ -0.33
EEA1-201ENST00000322349 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
EEA1-201ENST00000322349 RAD21O60216 631 aa12.99□□□□□ -0.33
EEA1-201ENST00000322349 TMF1P82094 1093 aa12.99□□□□□ -0.33
EEA1-201ENST00000322349 FBXO3Q9UK99 471 aa12.99□□□□□ -0.33
EEA1-201ENST00000322349 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
EEA1-201ENST00000322349 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
EEA1-201ENST00000322349 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
EEA1-201ENST00000322349 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
EEA1-201ENST00000322349 FBXW7Q969H0 707 aa12.98□□□□□ -0.33
EEA1-201ENST00000322349 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
EEA1-201ENST00000322349 CCNB3Q8WWL7 1395 aa12.97□□□□□ -0.33
EEA1-201ENST00000322349 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
EEA1-201ENST00000322349 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
EEA1-201ENST00000322349 MCCP23508 829 aa12.96□□□□□ -0.33
EEA1-201ENST00000322349 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
EEA1-201ENST00000322349 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
EEA1-201ENST00000322349 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.34
EEA1-201ENST00000322349 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.34
EEA1-201ENST00000322349 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
EEA1-201ENST00000322349 KIAA1211Q6ZU35 1233 aa12.94□□□□□ -0.34
EEA1-201ENST00000322349 SYTL4Q96C24 671 aaPredicted RBP12.94□□□□□ -0.34
EEA1-201ENST00000322349 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
EEA1-201ENST00000322349 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
EEA1-201ENST00000322349 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
EEA1-201ENST00000322349 MARCH6O60337 910 aa12.93□□□□□ -0.34
EEA1-201ENST00000322349 NRDCO43847 1150 aa12.92□□□□□ -0.34
EEA1-201ENST00000322349 NGEFQ8N5V2 710 aa12.92□□□□□ -0.34
EEA1-201ENST00000322349 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
EEA1-201ENST00000322349 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
EEA1-201ENST00000322349 AMPHP49418 695 aa12.92□□□□□ -0.34
EEA1-201ENST00000322349 MS4A1P11836 297 aa12.91□□□□□ -0.34
EEA1-201ENST00000322349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■□□ 18.7
EEA1-201ENST00000322349 FOXD1Q16676 465 aa12.91□□□□□ -0.34
EEA1-201ENST00000322349 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
EEA1-201ENST00000322349 NAP1L5Q96NT1 182 aaPredicted RBP12.9□□□□□ -0.34
EEA1-201ENST00000322349 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
EEA1-201ENST00000322349 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
EEA1-201ENST00000322349 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
EEA1-201ENST00000322349 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
EEA1-201ENST00000322349 HSCBQ8IWL3 235 aa12.89□□□□□ -0.35
EEA1-201ENST00000322349 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
EEA1-201ENST00000322349 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
EEA1-201ENST00000322349 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
EEA1-201ENST00000322349 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
EEA1-201ENST00000322349 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
EEA1-201ENST00000322349 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
EEA1-201ENST00000322349 CYB5RLQ6IPT4 315 aa12.87□□□□□ -0.35
EEA1-201ENST00000322349 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
EEA1-201ENST00000322349 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
EEA1-201ENST00000322349 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
EEA1-201ENST00000322349 KIF3BO15066 747 aa12.86□□□□□ -0.35
EEA1-201ENST00000322349 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
EEA1-201ENST00000322349 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
EEA1-201ENST00000322349 L1TD1Q5T7N2 865 aaKnown RBP12.83□□□□□ -0.36
EEA1-201ENST00000322349 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
EEA1-201ENST00000322349 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
EEA1-201ENST00000322349 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
EEA1-201ENST00000322349 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
EEA1-201ENST00000322349 PKD2Q13563 968 aa12.81□□□□□ -0.36
EEA1-201ENST00000322349 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
EEA1-201ENST00000322349 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
EEA1-201ENST00000322349 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
EEA1-201ENST00000322349 CEP89Q96ST8 783 aa12.79□□□□□ -0.36
EEA1-201ENST00000322349 CCDC146Q8IYE0 955 aa12.79□□□□□ -0.36
EEA1-201ENST00000322349 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
EEA1-201ENST00000322349 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
EEA1-201ENST00000322349 ARID3AQ99856 593 aa12.78□□□□□ -0.36
EEA1-201ENST00000322349 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.36
EEA1-201ENST00000322349 NOL10Q9BSC4 688 aaKnown RBP12.77□□□□□ -0.37
EEA1-201ENST00000322349 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.37
EEA1-201ENST00000322349 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
EEA1-201ENST00000322349 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
EEA1-201ENST00000322349 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
EEA1-201ENST00000322349 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
EEA1-201ENST00000322349 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
EEA1-201ENST00000322349 EFCAB2Q5VUJ9 269 aa12.75□□□□□ -0.37
EEA1-201ENST00000322349 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
EEA1-201ENST00000322349 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
EEA1-201ENST00000322349 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
EEA1-201ENST00000322349 VPS37DQ86XT2 251 aa12.75□□□□□ -0.37
EEA1-201ENST00000322349 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
EEA1-201ENST00000322349 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
EEA1-201ENST00000322349 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
EEA1-201ENST00000322349 PSME1Q06323 249 aa12.73□□□□□ -0.37
EEA1-201ENST00000322349 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
EEA1-201ENST00000322349 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
EEA1-201ENST00000322349 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
EEA1-201ENST00000322349 ELL2O00472 640 aaPredicted RBP12.72□□□□□ -0.37
EEA1-201ENST00000322349 TPM4P67936 248 aa12.72□□□□□ -0.37
EEA1-201ENST00000322349 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
EEA1-201ENST00000322349 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
EEA1-201ENST00000322349 CUX2O14529 1486 aa12.72□□□□□ -0.37
EEA1-201ENST00000322349 AMOTL1Q8IY63 956 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms