RNA–Protein interactions for RNA: ENST00000319359.7

ELL3-201, Transcript of elongation factor for RNA polymerase II 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELL3, Length 2,352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-201ENST00000319359 CNGB1Q14028 1251 aaPredicted RBP29.89■■■□□ 2.37
ELL3-201ENST00000319359 EPRSP07814 1512 aaKnown RBP29.87■■■□□ 2.37
ELL3-201ENST00000319359 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
ELL3-201ENST00000319359 AKNAQ7Z591 1439 aa29.83■■■□□ 2.37
ELL3-201ENST00000319359 KIF7Q2M1P5 1343 aa29.83■■■□□ 2.37
ELL3-201ENST00000319359 ZNF644Q9H582 1327 aaPredicted RBP29.82■■■□□ 2.36
ELL3-201ENST00000319359 ANKRD30BQ9BXX2 1392 aa29.81■■■□□ 2.36
ELL3-201ENST00000319359 ZBED9Q6R2W3 1325 aa29.79■■■□□ 2.36
ELL3-201ENST00000319359 ERICH6Q7L0X2 663 aa29.78■■■□□ 2.36
ELL3-201ENST00000319359 SENP3-EIF4A1A0A087X0R7 540 aa29.78■■■□□ 2.36
ELL3-201ENST00000319359 KIF21AQ7Z4S6 1674 aa29.77■■■□□ 2.36
ELL3-201ENST00000319359 ERICH6BQ5W0A0 696 aa29.77■■■□□ 2.36
ELL3-201ENST00000319359 MIA2Q96PC5 1412 aa29.77■■■□□ 2.36
ELL3-201ENST00000319359 RPRD2Q5VT52 1461 aaKnown RBP29.76■■■□□ 2.35
ELL3-201ENST00000319359 TEX14Q8IWB6 1497 aa29.76■■■□□ 2.35
ELL3-201ENST00000319359 SLC4A1APQ9BWU0 796 aaKnown RBP29.74■■■□□ 2.35
ELL3-201ENST00000319359 SPATA31E1Q6ZUB1 1445 aa29.73■■■□□ 2.35
ELL3-201ENST00000319359 DAPK1P53355 1430 aa29.72■■■□□ 2.35
ELL3-201ENST00000319359 IQGAP2Q13576 1575 aa29.7■■■□□ 2.35
ELL3-201ENST00000319359 WDR62O43379 1518 aa29.7■■■□□ 2.34
ELL3-201ENST00000319359 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.34
ELL3-201ENST00000319359 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
ELL3-201ENST00000319359 ABCC5O15440 1437 aa29.69■■■□□ 2.34
ELL3-201ENST00000319359 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
ELL3-201ENST00000319359 ZNF326Q5BKZ1 582 aaKnown RBP29.64■■■□□ 2.34
ELL3-201ENST00000319359 ROCK1Q13464 1354 aa29.61■■■□□ 2.33
ELL3-201ENST00000319359 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
ELL3-201ENST00000319359 DHX29Q7Z478 1369 aaKnown RBP29.58■■■□□ 2.33
ELL3-201ENST00000319359 DNMT1P26358 1616 aaKnown RBP29.57■■■□□ 2.32
ELL3-201ENST00000319359 ADAMTS12P58397 1594 aa29.54■■■□□ 2.32
ELL3-201ENST00000319359 PZPP20742 1482 aa29.54■■■□□ 2.32
ELL3-201ENST00000319359 BCORL1Q5H9F3 1711 aa29.51■■■□□ 2.32
ELL3-201ENST00000319359 SMG6Q86US8 1419 aaKnown RBP29.51■■■□□ 2.31
ELL3-201ENST00000319359 POLR1AO95602 1720 aaPredicted RBP29.51■■■□□ 2.31
ELL3-201ENST00000319359 USP47Q96K76 1375 aa29.5■■■□□ 2.31
ELL3-201ENST00000319359 NUP153P49790 1475 aaKnown RBP29.5■■■□□ 2.31
ELL3-201ENST00000319359 PAK3O75914 559 aaPredicted RBP29.48■■■□□ 2.31
ELL3-201ENST00000319359 ZNF777Q9ULD5 760 aaPredicted RBP29.47■■■□□ 2.31
ELL3-201ENST00000319359 NUDCQ9Y266 331 aa29.47■■■□□ 2.31
ELL3-201ENST00000319359 PRG4Q92954 1404 aaPredicted RBP29.44■■■□□ 2.3
ELL3-201ENST00000319359 PKD2Q13563 968 aa29.44■■■□□ 2.3
ELL3-201ENST00000319359 DISP1Q96F81 1524 aa29.44■■■□□ 2.3
ELL3-201ENST00000319359 MBD5Q9P267 1494 aa29.43■■■□□ 2.3
ELL3-201ENST00000319359 CCDC136Q96JN2 1154 aa29.42■■■□□ 2.3
ELL3-201ENST00000319359 CFDP1Q9UEE9 299 aaPredicted RBP29.41■■■□□ 2.3
ELL3-201ENST00000319359 NOP58Q9Y2X3 529 aaKnown RBP29.4■■■□□ 2.3
ELL3-201ENST00000319359 NBR1Q14596 966 aa29.4■■■□□ 2.3
ELL3-201ENST00000319359 CAMSAP2Q08AD1 1489 aa29.39■■■□□ 2.3
ELL3-201ENST00000319359 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.29
ELL3-201ENST00000319359 KIAA0556O60303 1618 aa29.38■■■□□ 2.29
ELL3-201ENST00000319359 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
ELL3-201ENST00000319359 KIAA1107Q9UPP5 1409 aa29.38■■■□□ 2.29
ELL3-201ENST00000319359 PNISRQ8TF01 805 aaKnown RBP29.38■■■□□ 2.29
ELL3-201ENST00000319359 DEKP35659 375 aaKnown RBP29.35■■■□□ 2.29
ELL3-201ENST00000319359 TMC1Q8TDI8 760 aa29.34■■■□□ 2.29
ELL3-201ENST00000319359 RAPGEF6Q8TEU7 1601 aa29.34■■■□□ 2.29
ELL3-201ENST00000319359 KDM5CP41229 1560 aa29.33■■■□□ 2.29
ELL3-201ENST00000319359 KDM2AQ9Y2K7 1162 aa29.3■■■□□ 2.28
ELL3-201ENST00000319359 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
ELL3-201ENST00000319359 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
ELL3-201ENST00000319359 KIF14Q15058 1648 aa29.29■■■□□ 2.28
ELL3-201ENST00000319359 GPATCH8Q9UKJ3 1502 aaKnown RBP29.29■■■□□ 2.28
ELL3-201ENST00000319359 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
ELL3-201ENST00000319359 PLB1Q6P1J6 1458 aa29.26■■■□□ 2.28
ELL3-201ENST00000319359 SALL2Q9Y467 1007 aaPredicted RBP29.25■■■□□ 2.27
ELL3-201ENST00000319359 ST20-MTHFSA0A0A6YYL1 179 aa29.25■■■□□ 2.27
ELL3-201ENST00000319359 ANKRD50Q9ULJ7 1429 aa29.22■■■□□ 2.27
ELL3-201ENST00000319359 ADGBQ8N7X0 1667 aa29.21■■■□□ 2.27
ELL3-201ENST00000319359 NUP155O75694 1391 aa29.21■■■□□ 2.27
ELL3-201ENST00000319359 MRC2Q9UBG0 1479 aa29.2■■■□□ 2.27
ELL3-201ENST00000319359 ANKRD30AQ9BXX3 1397 aa29.2■■■□□ 2.27
ELL3-201ENST00000319359 ARID4BQ4LE39 1312 aaPredicted RBP29.19■■■□□ 2.26
ELL3-201ENST00000319359 ADGRL2O95490 1459 aa29.19■■■□□ 2.26
ELL3-201ENST00000319359 IPO9Q96P70 1041 aaKnown RBP29.18■■■□□ 2.26
ELL3-201ENST00000319359 RALGAPBQ86X10 1494 aa29.18■■■□□ 2.26
ELL3-201ENST00000319359 ANP32AP39687 249 aaKnown RBP29.18■■■□□ 2.26
ELL3-201ENST00000319359 KIF15Q9NS87 1388 aa29.17■■■□□ 2.26
ELL3-201ENST00000319359 DCAF11Q8TEB1 546 aa29.16■■■□□ 2.26
ELL3-201ENST00000319359 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
ELL3-201ENST00000319359 LRPPRCP42704 1394 aaKnown RBP29.16■■■□□ 2.26
ELL3-201ENST00000319359 EXOC6Q8TAG9 804 aa29.16■■■□□ 2.26
ELL3-201ENST00000319359 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
ELL3-201ENST00000319359 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
ELL3-201ENST00000319359 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
ELL3-201ENST00000319359 ROCK2O75116 1388 aaKnown RBP29.14■■■□□ 2.26
ELL3-201ENST00000319359 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.25
ELL3-201ENST00000319359 MYBBP1AQ9BQG0 1328 aaKnown RBP29.13■■■□□ 2.25
ELL3-201ENST00000319359 RRP1P56182 461 aaKnown RBP29.12■■■□□ 2.25
ELL3-201ENST00000319359 IFT140Q96RY7 1462 aa29.09■■■□□ 2.25
ELL3-201ENST00000319359 NPM2Q86SE8 214 aaKnown RBP29.09■■■□□ 2.25
ELL3-201ENST00000319359 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
ELL3-201ENST00000319359 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
ELL3-201ENST00000319359 FBLN2P98095 1184 aa29.07■■■□□ 2.24
ELL3-201ENST00000319359 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
ELL3-201ENST00000319359 RCAN3Q9UKA8 241 aa29.05■■■□□ 2.24
ELL3-201ENST00000319359 RALBP1Q15311 655 aa29.04■■■□□ 2.24
ELL3-201ENST00000319359 CDCA7LQ96GN5 454 aa29.03■■■□□ 2.24
ELL3-201ENST00000319359 HNRNPMP52272 730 aaKnown RBP eCLIP29.03■■■□□ 2.24
ELL3-201ENST00000319359 ADCY10Q96PN6 1610 aa29.02■■■□□ 2.24
ELL3-201ENST00000319359 CHMP7Q8WUX9 453 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms