RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 STK26Q9P289 416 aa17.58■□□□□ 0.41
PROM2-201ENST00000317620 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
PROM2-201ENST00000317620 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
PROM2-201ENST00000317620 SOX12O15370 315 aa17.56■□□□□ 0.4
PROM2-201ENST00000317620 KIF3BO15066 747 aa17.55■□□□□ 0.4
PROM2-201ENST00000317620 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
PROM2-201ENST00000317620 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
PROM2-201ENST00000317620 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
PROM2-201ENST00000317620 MS4A1P11836 297 aa17.5■□□□□ 0.39
PROM2-201ENST00000317620 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
PROM2-201ENST00000317620 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
PROM2-201ENST00000317620 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
PROM2-201ENST00000317620 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
PROM2-201ENST00000317620 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
PROM2-201ENST00000317620 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
PROM2-201ENST00000317620 GOLGA6L22H0YM25 854 aa17.46■□□□□ 0.39
PROM2-201ENST00000317620 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
PROM2-201ENST00000317620 RALBP1Q15311 655 aa17.45■□□□□ 0.38
PROM2-201ENST00000317620 HDGFL2Q7Z4V5 671 aaPredicted RBP17.45■□□□□ 0.38
PROM2-201ENST00000317620 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
PROM2-201ENST00000317620 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
PROM2-201ENST00000317620 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
PROM2-201ENST00000317620 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
PROM2-201ENST00000317620 IGF1RP08069 1367 aa17.41■□□□□ 0.38
PROM2-201ENST00000317620 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.38
PROM2-201ENST00000317620 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
PROM2-201ENST00000317620 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
PROM2-201ENST00000317620 OS9Q13438 667 aaPredicted RBP17.38■□□□□ 0.37
PROM2-201ENST00000317620 PTPRGP23470 1445 aa17.36■□□□□ 0.37
PROM2-201ENST00000317620 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
PROM2-201ENST00000317620 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
PROM2-201ENST00000317620 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
PROM2-201ENST00000317620 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
PROM2-201ENST00000317620 TRIM44Q96DX7 344 aaPredicted RBP17.34■□□□□ 0.37
PROM2-201ENST00000317620 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
PROM2-201ENST00000317620 TPRNQ4KMQ1 711 aa17.33■□□□□ 0.37
PROM2-201ENST00000317620 PAK3O75914 559 aaPredicted RBP17.33■□□□□ 0.37
PROM2-201ENST00000317620 EIF3AQ14152 1382 aaKnown RBP17.33■□□□□ 0.36
PROM2-201ENST00000317620 TRAK1Q9UPV9 953 aa17.32■□□□□ 0.36
PROM2-201ENST00000317620 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
PROM2-201ENST00000317620 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
PROM2-201ENST00000317620 ERICH6BQ5W0A0 696 aa17.3■□□□□ 0.36
PROM2-201ENST00000317620 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
PROM2-201ENST00000317620 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
PROM2-201ENST00000317620 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
PROM2-201ENST00000317620 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
PROM2-201ENST00000317620 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
PROM2-201ENST00000317620 KCNJ4P48050 445 aa17.28■□□□□ 0.36
PROM2-201ENST00000317620 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
PROM2-201ENST00000317620 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.35
PROM2-201ENST00000317620 APBB1O00213 710 aa17.26■□□□□ 0.35
PROM2-201ENST00000317620 FGD1P98174 961 aa17.26■□□□□ 0.35
PROM2-201ENST00000317620 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
PROM2-201ENST00000317620 NPHP1O15259 732 aa17.25■□□□□ 0.35
PROM2-201ENST00000317620 PANK3Q9H999 370 aa17.25■□□□□ 0.35
PROM2-201ENST00000317620 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
PROM2-201ENST00000317620 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
PROM2-201ENST00000317620 ZNF644Q9H582 1327 aaPredicted RBP17.24■□□□□ 0.35
PROM2-201ENST00000317620 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
PROM2-201ENST00000317620 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
PROM2-201ENST00000317620 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
PROM2-201ENST00000317620 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
PROM2-201ENST00000317620 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
PROM2-201ENST00000317620 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
PROM2-201ENST00000317620 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
PROM2-201ENST00000317620 PTMAP06454 111 aaKnown RBP17.22■□□□□ 0.35
PROM2-201ENST00000317620 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
PROM2-201ENST00000317620 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
PROM2-201ENST00000317620 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PROM2-201ENST00000317620 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.35
PROM2-201ENST00000317620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.34
PROM2-201ENST00000317620 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.34
PROM2-201ENST00000317620 KIF15Q9NS87 1388 aa17.2■□□□□ 0.34
PROM2-201ENST00000317620 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
PROM2-201ENST00000317620 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
PROM2-201ENST00000317620 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
PROM2-201ENST00000317620 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
PROM2-201ENST00000317620 USP47Q96K76 1375 aa17.18■□□□□ 0.34
PROM2-201ENST00000317620 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
PROM2-201ENST00000317620 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
PROM2-201ENST00000317620 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
PROM2-201ENST00000317620 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PROM2-201ENST00000317620 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
PROM2-201ENST00000317620 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
PROM2-201ENST00000317620 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
PROM2-201ENST00000317620 FGD6Q6ZV73 1430 aa17.17■□□□□ 0.34
PROM2-201ENST00000317620 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
PROM2-201ENST00000317620 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
PROM2-201ENST00000317620 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
PROM2-201ENST00000317620 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
PROM2-201ENST00000317620 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
PROM2-201ENST00000317620 KIF21BO75037 1637 aa17.14■□□□□ 0.33
PROM2-201ENST00000317620 MCCP23508 829 aa17.14■□□□□ 0.33
PROM2-201ENST00000317620 AMPHP49418 695 aa17.13■□□□□ 0.33
PROM2-201ENST00000317620 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
PROM2-201ENST00000317620 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
PROM2-201ENST00000317620 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
PROM2-201ENST00000317620 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
PROM2-201ENST00000317620 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
PROM2-201ENST00000317620 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms