RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
FOXR1-201ENST00000317011 KIF14Q15058 1648 aa25.26■■□□□ 1.63
FOXR1-201ENST00000317011 HECW2Q9P2P5 1572 aa25.23■■□□□ 1.63
FOXR1-201ENST00000317011 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
FOXR1-201ENST00000317011 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
FOXR1-201ENST00000317011 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
FOXR1-201ENST00000317011 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
FOXR1-201ENST00000317011 ZFYVE16Q7Z3T8 1539 aa25.21■■□□□ 1.63
FOXR1-201ENST00000317011 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.62
FOXR1-201ENST00000317011 ATP10AO60312 1499 aa25.17■■□□□ 1.62
FOXR1-201ENST00000317011 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
FOXR1-201ENST00000317011 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
FOXR1-201ENST00000317011 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
FOXR1-201ENST00000317011 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
FOXR1-201ENST00000317011 KDM5CP41229 1560 aa25.11■■□□□ 1.61
FOXR1-201ENST00000317011 CDC42BPBQ9Y5S2 1711 aa25.11■■□□□ 1.61
FOXR1-201ENST00000317011 ARHGEF12Q9NZN5 1544 aa25.11■■□□□ 1.61
FOXR1-201ENST00000317011 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
FOXR1-201ENST00000317011 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
FOXR1-201ENST00000317011 TRAPPC8Q9Y2L5 1435 aa25.08■■□□□ 1.61
FOXR1-201ENST00000317011 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
FOXR1-201ENST00000317011 MLECQ14165 292 aa25.06■■□□□ 1.6
FOXR1-201ENST00000317011 PREX2Q70Z35 1606 aa25.05■■□□□ 1.6
FOXR1-201ENST00000317011 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
FOXR1-201ENST00000317011 ABCC1P33527 1531 aa25.02■■□□□ 1.6
FOXR1-201ENST00000317011 LMTK3Q96Q04 1460 aa25■■□□□ 1.59
FOXR1-201ENST00000317011 RIMS1Q86UR5 1692 aaKnown RBP25■■□□□ 1.59
FOXR1-201ENST00000317011 CDC42BPAQ5VT25 1732 aa24.99■■□□□ 1.59
FOXR1-201ENST00000317011 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
FOXR1-201ENST00000317011 KIAA1107Q9UPP5 1409 aa24.98■■□□□ 1.59
FOXR1-201ENST00000317011 CFDP1Q9UEE9 299 aaPredicted RBP24.98■■□□□ 1.59
FOXR1-201ENST00000317011 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
FOXR1-201ENST00000317011 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
FOXR1-201ENST00000317011 HNRNPMP52272 730 aaKnown RBP eCLIP24.97■■□□□ 1.59
FOXR1-201ENST00000317011 ILDR1Q86SU0 546 aaPredicted RBP24.97■■□□□ 1.59
FOXR1-201ENST00000317011 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
FOXR1-201ENST00000317011 ZNF777Q9ULD5 760 aaPredicted RBP24.97■■□□□ 1.59
FOXR1-201ENST00000317011 DIP2CQ9Y2E4 1556 aa24.97■■□□□ 1.59
FOXR1-201ENST00000317011 CCNB3Q8WWL7 1395 aa24.95■■□□□ 1.59
FOXR1-201ENST00000317011 AGLP35573 1532 aa24.94■■□□□ 1.58
FOXR1-201ENST00000317011 ITSN2Q9NZM3 1697 aa24.92■■□□□ 1.58
FOXR1-201ENST00000317011 SAMD9LQ8IVG5 1584 aa24.92■■□□□ 1.58
FOXR1-201ENST00000317011 CEBPAP49715 358 aaPredicted RBP24.91■■□□□ 1.58
FOXR1-201ENST00000317011 ABCA6Q8N139 1617 aa24.9■■□□□ 1.58
FOXR1-201ENST00000317011 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.58
FOXR1-201ENST00000317011 SPAG9O60271 1321 aaKnown RBP24.89■■□□□ 1.58
FOXR1-201ENST00000317011 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
FOXR1-201ENST00000317011 KIDINS220Q9ULH0 1771 aa24.89■■□□□ 1.57
FOXR1-201ENST00000317011 HSPA2P54652 639 aa24.88■■□□□ 1.57
FOXR1-201ENST00000317011 FER1L4A9Z1Z3 1794 aa24.87■■□□□ 1.57
FOXR1-201ENST00000317011 ZNF644Q9H582 1327 aaPredicted RBP24.86■■□□□ 1.57
FOXR1-201ENST00000317011 SYCP2Q9BX26 1530 aa24.86■■□□□ 1.57
FOXR1-201ENST00000317011 EHBP1L1Q8N3D4 1523 aa24.84■■□□□ 1.57
FOXR1-201ENST00000317011 MBD5Q9P267 1494 aa24.83■■□□□ 1.57
FOXR1-201ENST00000317011 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
FOXR1-201ENST00000317011 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
FOXR1-201ENST00000317011 SETD1BQ9UPS6 1966 aaKnown RBP24.77■■□□□ 1.56
FOXR1-201ENST00000317011 RSPH4AQ5TD94 716 aa24.76■■□□□ 1.55
FOXR1-201ENST00000317011 ESF1Q9H501 851 aaKnown RBP24.76■■□□□ 1.55
FOXR1-201ENST00000317011 RTEL1-TNFRSF6BF6WH68 1400 aa24.76■■□□□ 1.55
FOXR1-201ENST00000317011 CNTLNQ9NXG0 1405 aa24.76■■□□□ 1.55
FOXR1-201ENST00000317011 NCOA2Q15596 1464 aa24.76■■□□□ 1.55
FOXR1-201ENST00000317011 ATP7AQ04656 1500 aa24.76■■□□□ 1.55
FOXR1-201ENST00000317011 A2MP01023 1474 aa24.73■■□□□ 1.55
FOXR1-201ENST00000317011 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
FOXR1-201ENST00000317011 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
FOXR1-201ENST00000317011 FBXO41Q8TF61 875 aa24.71■■□□□ 1.55
FOXR1-201ENST00000317011 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
FOXR1-201ENST00000317011 PLXNC1O60486 1568 aa24.7■■□□□ 1.54
FOXR1-201ENST00000317011 LRRC9Q6ZRR7 1453 aa24.7■■□□□ 1.54
FOXR1-201ENST00000317011 KANK4Q5T7N3 995 aaPredicted RBP24.69■■□□□ 1.54
FOXR1-201ENST00000317011 MAP3K1Q13233 1512 aa24.69■■□□□ 1.54
FOXR1-201ENST00000317011 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
FOXR1-201ENST00000317011 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
FOXR1-201ENST00000317011 PREX1Q8TCU6 1659 aa24.67■■□□□ 1.54
FOXR1-201ENST00000317011 C3P01024 1663 aa24.66■■□□□ 1.54
FOXR1-201ENST00000317011 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
FOXR1-201ENST00000317011 GGT6Q6P531 493 aa24.65■■□□□ 1.54
FOXR1-201ENST00000317011 NPATQ14207 1427 aa24.64■■□□□ 1.54
FOXR1-201ENST00000317011 DMRT2Q9Y5R5 561 aa24.64■■□□□ 1.54
FOXR1-201ENST00000317011 CAMSAP2Q08AD1 1489 aa24.62■■□□□ 1.53
FOXR1-201ENST00000317011 CCDC141Q6ZP82 1450 aa24.62■■□□□ 1.53
FOXR1-201ENST00000317011 TSPY4P0CV99 314 aa24.59■■□□□ 1.53
FOXR1-201ENST00000317011 TSPY10P0CW01 314 aa24.59■■□□□ 1.53
FOXR1-201ENST00000317011 MROH2AA6NES4 1674 aa24.58■■□□□ 1.53
FOXR1-201ENST00000317011 ADGBQ8N7X0 1667 aa24.57■■□□□ 1.52
FOXR1-201ENST00000317011 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
FOXR1-201ENST00000317011 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
FOXR1-201ENST00000317011 STRCQ7RTU9 1775 aa24.56■■□□□ 1.52
FOXR1-201ENST00000317011 ARHGEF5Q12774 1597 aa24.55■■□□□ 1.52
FOXR1-201ENST00000317011 MIA2Q96PC5 1412 aa24.55■■□□□ 1.52
FOXR1-201ENST00000317011 KIF3BO15066 747 aa24.54■■□□□ 1.52
FOXR1-201ENST00000317011 PTPRTO14522 1441 aa24.53■■□□□ 1.52
FOXR1-201ENST00000317011 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
FOXR1-201ENST00000317011 NCOA1Q15788 1441 aa24.49■■□□□ 1.51
FOXR1-201ENST00000317011 CLTCQ00610 1675 aaKnown RBP24.49■■□□□ 1.51
FOXR1-201ENST00000317011 APLP2Q06481 763 aa24.45■■□□□ 1.5
FOXR1-201ENST00000317011 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
FOXR1-201ENST00000317011 MAST1Q9Y2H9 1570 aa24.43■■□□□ 1.5
FOXR1-201ENST00000317011 FBXO31Q5XUX0 539 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms