RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
TRIM25-201ENST00000316881 PKD2Q13563 968 aa18.35■□□□□ 0.53
TRIM25-201ENST00000316881 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
TRIM25-201ENST00000316881 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
TRIM25-201ENST00000316881 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
TRIM25-201ENST00000316881 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.52
TRIM25-201ENST00000316881 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
TRIM25-201ENST00000316881 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
TRIM25-201ENST00000316881 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
TRIM25-201ENST00000316881 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
TRIM25-201ENST00000316881 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
TRIM25-201ENST00000316881 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
TRIM25-201ENST00000316881 RGS3P49796 1198 aa18.3■□□□□ 0.52
TRIM25-201ENST00000316881 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
TRIM25-201ENST00000316881 TPRNQ4KMQ1 711 aa18.3■□□□□ 0.52
TRIM25-201ENST00000316881 GLIPR1L2Q4G1C9 344 aa18.29■□□□□ 0.52
TRIM25-201ENST00000316881 KIF3BO15066 747 aa18.29■□□□□ 0.52
TRIM25-201ENST00000316881 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
TRIM25-201ENST00000316881 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
TRIM25-201ENST00000316881 ISY1Q9ULR0 285 aaKnown RBP18.28■□□□□ 0.52
TRIM25-201ENST00000316881 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
TRIM25-201ENST00000316881 ZNF330Q9Y3S2 320 aaPredicted RBP18.26■□□□□ 0.51
TRIM25-201ENST00000316881 NUP155O75694 1391 aa18.26■□□□□ 0.51
TRIM25-201ENST00000316881 RAB3GAP2Q9H2M9 1393 aa18.26■□□□□ 0.51
TRIM25-201ENST00000316881 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
TRIM25-201ENST00000316881 MCCP23508 829 aa18.25■□□□□ 0.51
TRIM25-201ENST00000316881 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
TRIM25-201ENST00000316881 RSPH4AQ5TD94 716 aa18.25■□□□□ 0.51
TRIM25-201ENST00000316881 IPO8O15397 1037 aaKnown RBP18.24■□□□□ 0.51
TRIM25-201ENST00000316881 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
TRIM25-201ENST00000316881 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
TRIM25-201ENST00000316881 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
TRIM25-201ENST00000316881 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
TRIM25-201ENST00000316881 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
TRIM25-201ENST00000316881 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
TRIM25-201ENST00000316881 KTN1Q86UP2 1357 aaKnown RBP18.22■□□□□ 0.51
TRIM25-201ENST00000316881 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
TRIM25-201ENST00000316881 GOLGA6L4A6NEF3 574 aa18.21■□□□□ 0.51
TRIM25-201ENST00000316881 NGDNQ8NEJ9 315 aaKnown RBP18.21■□□□□ 0.51
TRIM25-201ENST00000316881 U2AF1L5P0DN76 240 aaPredicted RBP18.21■□□□□ 0.51
TRIM25-201ENST00000316881 U2AF1Q01081 240 aaKnown RBP eCLIP18.21■□□□□ 0.512e-11■■■□□ 15.6
TRIM25-201ENST00000316881 ROCK2O75116 1388 aaKnown RBP18.2■□□□□ 0.5
TRIM25-201ENST00000316881 NRDCO43847 1150 aa18.19■□□□□ 0.5
TRIM25-201ENST00000316881 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
TRIM25-201ENST00000316881 HDAC5Q9UQL6 1122 aa18.17■□□□□ 0.5
TRIM25-201ENST00000316881 CLSTN1O94985 981 aa18.16■□□□□ 0.5
TRIM25-201ENST00000316881 DNTTIP2Q5QJE6 756 aaKnown RBP18.16■□□□□ 0.5
TRIM25-201ENST00000316881 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
TRIM25-201ENST00000316881 PLCB2Q00722 1185 aa18.16■□□□□ 0.5
TRIM25-201ENST00000316881 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
TRIM25-201ENST00000316881 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
TRIM25-201ENST00000316881 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM25-201ENST00000316881 RBM19Q9Y4C8 960 aaKnown RBP18.15■□□□□ 0.5
TRIM25-201ENST00000316881 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
TRIM25-201ENST00000316881 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.5
TRIM25-201ENST00000316881 FOXD1Q16676 465 aa18.14■□□□□ 0.49
TRIM25-201ENST00000316881 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
TRIM25-201ENST00000316881 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
TRIM25-201ENST00000316881 GNL2Q13823 731 aaKnown RBP18.12■□□□□ 0.49
TRIM25-201ENST00000316881 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
TRIM25-201ENST00000316881 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
TRIM25-201ENST00000316881 AMPHP49418 695 aa18.12■□□□□ 0.49
TRIM25-201ENST00000316881 G3V3G9 751 aa18.11■□□□□ 0.49
TRIM25-201ENST00000316881 DCAF8Q5TAQ9 597 aa18.11■□□□□ 0.49
TRIM25-201ENST00000316881 RALBP1Q15311 655 aa18.11■□□□□ 0.49
TRIM25-201ENST00000316881 APBB1O00213 710 aa18.08■□□□□ 0.49
TRIM25-201ENST00000316881 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.49
TRIM25-201ENST00000316881 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
TRIM25-201ENST00000316881 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
TRIM25-201ENST00000316881 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
TRIM25-201ENST00000316881 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
TRIM25-201ENST00000316881 LMOD3Q0VAK6 560 aa18.07■□□□□ 0.48
TRIM25-201ENST00000316881 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
TRIM25-201ENST00000316881 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
TRIM25-201ENST00000316881 GPATCH3Q96I76 525 aa18.05■□□□□ 0.48
TRIM25-201ENST00000316881 DHX57Q6P158 1386 aaKnown RBP18.04■□□□□ 0.48
TRIM25-201ENST00000316881 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
TRIM25-201ENST00000316881 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
TRIM25-201ENST00000316881 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
TRIM25-201ENST00000316881 RWDD1Q9H446 243 aaPredicted RBP18.03■□□□□ 0.48
TRIM25-201ENST00000316881 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.48
TRIM25-201ENST00000316881 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
TRIM25-201ENST00000316881 HMMRO75330 724 aa18.02■□□□□ 0.47
TRIM25-201ENST00000316881 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
TRIM25-201ENST00000316881 ERICH6BQ5W0A0 696 aa18.01■□□□□ 0.47
TRIM25-201ENST00000316881 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
TRIM25-201ENST00000316881 PTPRGP23470 1445 aa18■□□□□ 0.47
TRIM25-201ENST00000316881 EVA1CP58658 441 aa17.99■□□□□ 0.47
TRIM25-201ENST00000316881 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
TRIM25-201ENST00000316881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
TRIM25-201ENST00000316881 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
TRIM25-201ENST00000316881 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
TRIM25-201ENST00000316881 TRAK1Q9UPV9 953 aa17.98■□□□□ 0.47
TRIM25-201ENST00000316881 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
TRIM25-201ENST00000316881 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
TRIM25-201ENST00000316881 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
TRIM25-201ENST00000316881 SMC4Q9NTJ3 1288 aa17.96■□□□□ 0.47
TRIM25-201ENST00000316881 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
TRIM25-201ENST00000316881 SLC4A10Q6U841 1118 aa17.94■□□□□ 0.46
TRIM25-201ENST00000316881 RTN4Q9NQC3 1192 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms