RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 ADGRL1O94910 1474 aa28.83■■■□□ 2.21
KLHDC4-202ENST00000316853 CDC42BPAQ5VT25 1732 aa28.82■■■□□ 2.2
KLHDC4-202ENST00000316853 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
KLHDC4-202ENST00000316853 SCAPERQ9BY12 1400 aa28.79■■■□□ 2.2
KLHDC4-202ENST00000316853 KDM4FA0A1W2PPD8 638 aa28.76■■■□□ 2.19
KLHDC4-202ENST00000316853 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
KLHDC4-202ENST00000316853 TIAM1Q13009 1591 aa28.73■■■□□ 2.19
KLHDC4-202ENST00000316853 POGZQ7Z3K3 1410 aa28.7■■■□□ 2.19
KLHDC4-202ENST00000316853 GPATCH8Q9UKJ3 1502 aaKnown RBP28.69■■■□□ 2.18
KLHDC4-202ENST00000316853 CCNB3Q8WWL7 1395 aa28.69■■■□□ 2.18
KLHDC4-202ENST00000316853 ZNF777Q9ULD5 760 aaPredicted RBP28.68■■■□□ 2.18
KLHDC4-202ENST00000316853 ZMYM4Q5VZL5 1548 aa28.67■■■□□ 2.18
KLHDC4-202ENST00000316853 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
KLHDC4-202ENST00000316853 ARHGEF40Q8TER5 1519 aa28.64■■■□□ 2.18
KLHDC4-202ENST00000316853 ABCC1P33527 1531 aa28.64■■■□□ 2.17
KLHDC4-202ENST00000316853 AFAP1Q8N556 730 aa28.63■■■□□ 2.17
KLHDC4-202ENST00000316853 CFDP1Q9UEE9 299 aaPredicted RBP28.63■■■□□ 2.17
KLHDC4-202ENST00000316853 ITSN2Q9NZM3 1697 aa28.63■■■□□ 2.17
KLHDC4-202ENST00000316853 ZFYVE16Q7Z3T8 1539 aa28.63■■■□□ 2.17
KLHDC4-202ENST00000316853 ZNF518AQ6AHZ1 1483 aa28.62■■■□□ 2.17
KLHDC4-202ENST00000316853 SAMD9LQ8IVG5 1584 aa28.61■■■□□ 2.17
KLHDC4-202ENST00000316853 YEATS2Q9ULM3 1422 aa28.6■■■□□ 2.17
KLHDC4-202ENST00000316853 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
KLHDC4-202ENST00000316853 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
KLHDC4-202ENST00000316853 MAGI2Q86UL8 1455 aa28.59■■■□□ 2.17
KLHDC4-202ENST00000316853 MYT1LQ9UL68 1186 aa28.59■■■□□ 2.17
KLHDC4-202ENST00000316853 ARID4BQ4LE39 1312 aaPredicted RBP28.59■■■□□ 2.17
KLHDC4-202ENST00000316853 NCOA2Q15596 1464 aa28.59■■■□□ 2.17
KLHDC4-202ENST00000316853 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
KLHDC4-202ENST00000316853 APLP2Q06481 763 aa28.57■■■□□ 2.16
KLHDC4-202ENST00000316853 KDM5CP41229 1560 aa28.56■■■□□ 2.16
KLHDC4-202ENST00000316853 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
KLHDC4-202ENST00000316853 TRAPPC8Q9Y2L5 1435 aa28.56■■■□□ 2.16
KLHDC4-202ENST00000316853 SYCP2Q9BX26 1530 aa28.54■■■□□ 2.16
KLHDC4-202ENST00000316853 HNRNPMP52272 730 aaKnown RBP eCLIP28.53■■■□□ 2.168e-7■■■■□ 20.8
KLHDC4-202ENST00000316853 HECW2Q9P2P5 1572 aa28.52■■■□□ 2.16
KLHDC4-202ENST00000316853 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
KLHDC4-202ENST00000316853 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
KLHDC4-202ENST00000316853 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
KLHDC4-202ENST00000316853 PLEKHH2Q8IVE3 1493 aa28.49■■■□□ 2.15
KLHDC4-202ENST00000316853 ATP10AO60312 1499 aa28.48■■■□□ 2.15
KLHDC4-202ENST00000316853 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
KLHDC4-202ENST00000316853 ADAMTSL3P82987 1691 aa28.45■■■□□ 2.15
KLHDC4-202ENST00000316853 KIAA1107Q9UPP5 1409 aa28.45■■■□□ 2.15
KLHDC4-202ENST00000316853 KIDINS220Q9ULH0 1771 aa28.44■■■□□ 2.14
KLHDC4-202ENST00000316853 C9orf84Q5VXU9 1444 aa28.43■■■□□ 2.14
KLHDC4-202ENST00000316853 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
KLHDC4-202ENST00000316853 DIP2CQ9Y2E4 1556 aa28.43■■■□□ 2.14
KLHDC4-202ENST00000316853 MLECQ14165 292 aa28.4■■■□□ 2.14
KLHDC4-202ENST00000316853 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
KLHDC4-202ENST00000316853 MADDQ8WXG6 1647 aa28.39■■■□□ 2.13
KLHDC4-202ENST00000316853 CAMSAP2Q08AD1 1489 aa28.39■■■□□ 2.13
KLHDC4-202ENST00000316853 MBD5Q9P267 1494 aa28.35■■■□□ 2.13
KLHDC4-202ENST00000316853 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
KLHDC4-202ENST00000316853 RIMS1Q86UR5 1692 aaKnown RBP28.33■■■□□ 2.13
KLHDC4-202ENST00000316853 MYOM3Q5VTT5 1437 aa28.33■■■□□ 2.13
KLHDC4-202ENST00000316853 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.12
KLHDC4-202ENST00000316853 REREQ9P2R6 1566 aa28.31■■■□□ 2.12
KLHDC4-202ENST00000316853 FER1L4A9Z1Z3 1794 aa28.3■■■□□ 2.12
KLHDC4-202ENST00000316853 PTPRMP28827 1452 aa28.3■■■□□ 2.12
KLHDC4-202ENST00000316853 CCDC141Q6ZP82 1450 aa28.27■■■□□ 2.12
KLHDC4-202ENST00000316853 MIA2Q96PC5 1412 aa28.26■■■□□ 2.12
KLHDC4-202ENST00000316853 RSPH4AQ5TD94 716 aa28.24■■■□□ 2.11
KLHDC4-202ENST00000316853 PLPPR3Q6T4P5 718 aa28.24■■■□□ 2.11
KLHDC4-202ENST00000316853 ARHGEF5Q12774 1597 aa28.24■■■□□ 2.11
KLHDC4-202ENST00000316853 AGLP35573 1532 aa28.23■■■□□ 2.11
KLHDC4-202ENST00000316853 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
KLHDC4-202ENST00000316853 A2MP01023 1474 aa28.2■■■□□ 2.1
KLHDC4-202ENST00000316853 RTEL1-TNFRSF6BF6WH68 1400 aa28.19■■■□□ 2.1
KLHDC4-202ENST00000316853 PTPN23Q9H3S7 1636 aa28.19■■■□□ 2.1
KLHDC4-202ENST00000316853 TSPY4P0CV99 314 aa28.19■■■□□ 2.1
KLHDC4-202ENST00000316853 TSPY10P0CW01 314 aa28.19■■■□□ 2.1
KLHDC4-202ENST00000316853 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
KLHDC4-202ENST00000316853 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
KLHDC4-202ENST00000316853 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
KLHDC4-202ENST00000316853 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
KLHDC4-202ENST00000316853 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
KLHDC4-202ENST00000316853 CEBPAP49715 358 aaPredicted RBP28.08■■■□□ 2.09
KLHDC4-202ENST00000316853 DHX29Q7Z478 1369 aaKnown RBP28.08■■■□□ 2.09
KLHDC4-202ENST00000316853 GGT6Q6P531 493 aa28.07■■■□□ 2.08
KLHDC4-202ENST00000316853 TCOF1Q13428 1488 aaKnown RBP28.07■■■□□ 2.08
KLHDC4-202ENST00000316853 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
KLHDC4-202ENST00000316853 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
KLHDC4-202ENST00000316853 ABCC5O15440 1437 aa28.03■■■□□ 2.08
KLHDC4-202ENST00000316853 FAM50AQ14320 339 aaKnown RBP28.03■■■□□ 2.08
KLHDC4-202ENST00000316853 C3P01024 1663 aa28.03■■■□□ 2.08
KLHDC4-202ENST00000316853 CLTCQ00610 1675 aaKnown RBP28.01■■■□□ 2.07
KLHDC4-202ENST00000316853 KIF3BO15066 747 aa28.01■■■□□ 2.07
KLHDC4-202ENST00000316853 DAPK1P53355 1430 aa28.01■■■□□ 2.07
KLHDC4-202ENST00000316853 CNTLNQ9NXG0 1405 aa27.99■■■□□ 2.07
KLHDC4-202ENST00000316853 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
KLHDC4-202ENST00000316853 SHANK2Q9UPX8 1470 aa27.96■■■□□ 2.07
KLHDC4-202ENST00000316853 CHIC2Q9UKJ5 165 aa27.95■■■□□ 2.06
KLHDC4-202ENST00000316853 SETD1BQ9UPS6 1966 aaKnown RBP27.94■■■□□ 2.06
KLHDC4-202ENST00000316853 LMTK3Q96Q04 1460 aa27.94■■■□□ 2.06
KLHDC4-202ENST00000316853 RRP7BPQ9NSQ0 103 aa27.93■■■□□ 2.06
KLHDC4-202ENST00000316853 PREX1Q8TCU6 1659 aa27.92■■■□□ 2.06
KLHDC4-202ENST00000316853 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
KLHDC4-202ENST00000316853 PPP6R1Q9UPN7 881 aa27.91■■■□□ 2.06
KLHDC4-202ENST00000316853 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms