RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ADCY10Q96PN6 1610 aa16.45■□□□□ 0.22
LDLRAD3-201ENST00000315571 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
LDLRAD3-201ENST00000315571 KDM5BQ9UGL1 1544 aa16.43■□□□□ 0.22
LDLRAD3-201ENST00000315571 EHBP1L1Q8N3D4 1523 aa16.43■□□□□ 0.22
LDLRAD3-201ENST00000315571 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
LDLRAD3-201ENST00000315571 UBE2Q2Q8WVN8 375 aa16.41■□□□□ 0.22
LDLRAD3-201ENST00000315571 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD3-201ENST00000315571 MAGI3Q5TCQ9 1506 aa16.4■□□□□ 0.22
LDLRAD3-201ENST00000315571 ZCCHC11Q5TAX3 1644 aaKnown RBP16.4■□□□□ 0.22
LDLRAD3-201ENST00000315571 SLC24A1O60721 1099 aa16.39■□□□□ 0.22
LDLRAD3-201ENST00000315571 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
LDLRAD3-201ENST00000315571 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
LDLRAD3-201ENST00000315571 PKNOX2Q96KN3 472 aa16.35■□□□□ 0.21
LDLRAD3-201ENST00000315571 SUPT6HQ7KZ85 1726 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-201ENST00000315571 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
LDLRAD3-201ENST00000315571 MSH5O43196 834 aa16.33■□□□□ 0.2
LDLRAD3-201ENST00000315571 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
LDLRAD3-201ENST00000315571 PHLDB1Q86UU1 1377 aa16.33■□□□□ 0.2
LDLRAD3-201ENST00000315571 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
LDLRAD3-201ENST00000315571 WDR7Q9Y4E6 1490 aa16.33■□□□□ 0.2
LDLRAD3-201ENST00000315571 KIF14Q15058 1648 aa16.32■□□□□ 0.2
LDLRAD3-201ENST00000315571 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
LDLRAD3-201ENST00000315571 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
LDLRAD3-201ENST00000315571 IL27Q8NEV9 243 aa16.27■□□□□ 0.19
LDLRAD3-201ENST00000315571 CFDP1Q9UEE9 299 aaPredicted RBP16.26■□□□□ 0.19
LDLRAD3-201ENST00000315571 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
LDLRAD3-201ENST00000315571 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
LDLRAD3-201ENST00000315571 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
LDLRAD3-201ENST00000315571 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
LDLRAD3-201ENST00000315571 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
LDLRAD3-201ENST00000315571 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
LDLRAD3-201ENST00000315571 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
LDLRAD3-201ENST00000315571 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
LDLRAD3-201ENST00000315571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.19
LDLRAD3-201ENST00000315571 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
LDLRAD3-201ENST00000315571 MIA2Q96PC5 1412 aa16.2■□□□□ 0.18
LDLRAD3-201ENST00000315571 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
LDLRAD3-201ENST00000315571 FAM69CQ0P6D2 419 aa16.19■□□□□ 0.18
LDLRAD3-201ENST00000315571 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD3-201ENST00000315571 ITSN2Q9NZM3 1697 aa16.18■□□□□ 0.18
LDLRAD3-201ENST00000315571 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
LDLRAD3-201ENST00000315571 TRIM52Q96A61 297 aa16.17■□□□□ 0.18
LDLRAD3-201ENST00000315571 EFCAB2Q5VUJ9 269 aa16.17■□□□□ 0.18
LDLRAD3-201ENST00000315571 PLCH2O75038 1416 aa16.16■□□□□ 0.18
LDLRAD3-201ENST00000315571 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
LDLRAD3-201ENST00000315571 CD109Q6YHK3 1445 aa16.16■□□□□ 0.18
LDLRAD3-201ENST00000315571 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
LDLRAD3-201ENST00000315571 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
LDLRAD3-201ENST00000315571 CDC42BPAQ5VT25 1732 aa16.13■□□□□ 0.17
LDLRAD3-201ENST00000315571 MYO5CQ9NQX4 1742 aa16.13■□□□□ 0.17
LDLRAD3-201ENST00000315571 PREX2Q70Z35 1606 aa16.13■□□□□ 0.17
LDLRAD3-201ENST00000315571 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
LDLRAD3-201ENST00000315571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
LDLRAD3-201ENST00000315571 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
LDLRAD3-201ENST00000315571 CAMSAP2Q08AD1 1489 aa16.12■□□□□ 0.17
LDLRAD3-201ENST00000315571 TCOF1Q13428 1488 aaKnown RBP16.12■□□□□ 0.17
LDLRAD3-201ENST00000315571 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD3-201ENST00000315571 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
LDLRAD3-201ENST00000315571 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
LDLRAD3-201ENST00000315571 FANCAO15360 1455 aa16.09■□□□□ 0.17
LDLRAD3-201ENST00000315571 GLI2P10070 1586 aa16.09■□□□□ 0.17
LDLRAD3-201ENST00000315571 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
LDLRAD3-201ENST00000315571 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
LDLRAD3-201ENST00000315571 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.16
LDLRAD3-201ENST00000315571 PLEKHH2Q8IVE3 1493 aa16.07■□□□□ 0.16
LDLRAD3-201ENST00000315571 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
LDLRAD3-201ENST00000315571 ANP32AP39687 249 aaKnown RBP16.06■□□□□ 0.16
LDLRAD3-201ENST00000315571 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
LDLRAD3-201ENST00000315571 SAMD9LQ8IVG5 1584 aa16.05■□□□□ 0.16
LDLRAD3-201ENST00000315571 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
LDLRAD3-201ENST00000315571 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
LDLRAD3-201ENST00000315571 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
LDLRAD3-201ENST00000315571 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 DAPK1P53355 1430 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 MAP3K4Q9Y6R4 1608 aa16.03■□□□□ 0.16
LDLRAD3-201ENST00000315571 ABCC5O15440 1437 aa16.02■□□□□ 0.15
LDLRAD3-201ENST00000315571 SCAPERQ9BY12 1400 aa16.01■□□□□ 0.15
LDLRAD3-201ENST00000315571 TEX14Q8IWB6 1497 aa16.01■□□□□ 0.15
LDLRAD3-201ENST00000315571 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
LDLRAD3-201ENST00000315571 CCDC141Q6ZP82 1450 aa16■□□□□ 0.15
LDLRAD3-201ENST00000315571 NEO1Q92859 1461 aa16■□□□□ 0.15
LDLRAD3-201ENST00000315571 ABCC1P33527 1531 aa16■□□□□ 0.15
LDLRAD3-201ENST00000315571 DNMT1P26358 1616 aaKnown RBP16■□□□□ 0.15
LDLRAD3-201ENST00000315571 PTPRKQ15262 1439 aa16■□□□□ 0.15
LDLRAD3-201ENST00000315571 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
LDLRAD3-201ENST00000315571 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
LDLRAD3-201ENST00000315571 RRP7BPQ9NSQ0 103 aa15.98■□□□□ 0.15
LDLRAD3-201ENST00000315571 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 TSPOAP1O95153 1857 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 ARHGEF5Q12774 1597 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 TRAPPC8Q9Y2L5 1435 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 C9orf84Q5VXU9 1444 aa15.97■□□□□ 0.15
LDLRAD3-201ENST00000315571 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms