RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CCDC9Q9Y3X0 531 aaKnown RBP12.08□□□□□ -0.48
BDNF-201ENST00000314915 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
BDNF-201ENST00000314915 FAM193AP78312 1265 aa12.07□□□□□ -0.48
BDNF-201ENST00000314915 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
BDNF-201ENST00000314915 APPP05067 770 aa12.06□□□□□ -0.48
BDNF-201ENST00000314915 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
BDNF-201ENST00000314915 ARID3AQ99856 593 aa12.05□□□□□ -0.48
BDNF-201ENST00000314915 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
BDNF-201ENST00000314915 ESPNB1AK53 854 aa12.05□□□□□ -0.48
BDNF-201ENST00000314915 UBTFP17480 764 aaKnown RBP12.05□□□□□ -0.48
BDNF-201ENST00000314915 TICAM2Q86XR7 235 aa12.05□□□□□ -0.48
BDNF-201ENST00000314915 HMGB1P09429 215 aaKnown RBP12.04□□□□□ -0.48
BDNF-201ENST00000314915 MS4A1P11836 297 aa12.04□□□□□ -0.48
BDNF-201ENST00000314915 KCNG1Q9UIX4 513 aa12.04□□□□□ -0.48
BDNF-201ENST00000314915 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.48
BDNF-201ENST00000314915 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.48
BDNF-201ENST00000314915 PDE4AP27815 886 aa12.02□□□□□ -0.49
BDNF-201ENST00000314915 SLC20A2Q08357 652 aa12.01□□□□□ -0.49
BDNF-201ENST00000314915 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.01□□□□□ -0.49
BDNF-201ENST00000314915 NCAPD3P42695 1498 aa12.01□□□□□ -0.49
BDNF-201ENST00000314915 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
BDNF-201ENST00000314915 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
BDNF-201ENST00000314915 NACADO15069 1562 aa12□□□□□ -0.49
BDNF-201ENST00000314915 BACH2Q9BYV9 841 aa12□□□□□ -0.49
BDNF-201ENST00000314915 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
BDNF-201ENST00000314915 DNAJC2Q99543 621 aaKnown RBP12□□□□□ -0.49
BDNF-201ENST00000314915 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
BDNF-201ENST00000314915 TPRNQ4KMQ1 711 aa11.99□□□□□ -0.49
BDNF-201ENST00000314915 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
BDNF-201ENST00000314915 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
BDNF-201ENST00000314915 MCCP23508 829 aa11.98□□□□□ -0.49
BDNF-201ENST00000314915 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.98□□□□□ -0.49
BDNF-201ENST00000314915 CLSTN1O94985 981 aa11.97□□□□□ -0.49
BDNF-201ENST00000314915 PHF14O94880 888 aa11.96□□□□□ -0.49
BDNF-201ENST00000314915 PLCD4Q9BRC7 762 aa11.95□□□□□ -0.5
BDNF-201ENST00000314915 CCDC94Q9BW85 323 aaPredicted RBP11.95□□□□□ -0.5
BDNF-201ENST00000314915 XRCC6P12956 609 aaKnown RBP eCLIP11.95□□□□□ -0.5
BDNF-201ENST00000314915 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
BDNF-201ENST00000314915 MYH16Q9H6N6 1097 aa11.95□□□□□ -0.5
BDNF-201ENST00000314915 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
BDNF-201ENST00000314915 RIPK4P57078 832 aa11.94□□□□□ -0.5
BDNF-201ENST00000314915 CC2D1BQ5T0F9 858 aaKnown RBP11.93□□□□□ -0.5
BDNF-201ENST00000314915 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
BDNF-201ENST00000314915 MRE11P49959 708 aa11.93□□□□□ -0.5
BDNF-201ENST00000314915 OFD1O75665 1012 aa11.92□□□□□ -0.5
BDNF-201ENST00000314915 PSEN1P49768 467 aa11.92□□□□□ -0.5
BDNF-201ENST00000314915 ISY1Q9ULR0 285 aaKnown RBP11.92□□□□□ -0.5
BDNF-201ENST00000314915 POGKQ9P215 609 aa11.92□□□□□ -0.5
BDNF-201ENST00000314915 DYNC1I1O14576 645 aa11.91□□□□□ -0.5
BDNF-201ENST00000314915 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
BDNF-201ENST00000314915 E9PSI1 815 aa11.91□□□□□ -0.5
BDNF-201ENST00000314915 FSD2A1L4K1 749 aa11.9□□□□□ -0.5
BDNF-201ENST00000314915 RALBP1Q15311 655 aa11.9□□□□□ -0.5
BDNF-201ENST00000314915 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.51
BDNF-201ENST00000314915 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
BDNF-201ENST00000314915 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
BDNF-201ENST00000314915 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
BDNF-201ENST00000314915 TSPYL1Q9H0U9 437 aa11.87□□□□□ -0.51
BDNF-201ENST00000314915 CEP120Q8N960 986 aa11.87□□□□□ -0.51
BDNF-201ENST00000314915 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
BDNF-201ENST00000314915 CGNQ9P2M7 1197 aaKnown RBP11.86□□□□□ -0.51
BDNF-201ENST00000314915 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
BDNF-201ENST00000314915 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
BDNF-201ENST00000314915 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
BDNF-201ENST00000314915 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
BDNF-201ENST00000314915 RNF123Q5XPI4 1314 aa11.83□□□□□ -0.52
BDNF-201ENST00000314915 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
BDNF-201ENST00000314915 SIN3AQ96ST3 1273 aa11.82□□□□□ -0.52
BDNF-201ENST00000314915 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
BDNF-201ENST00000314915 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
BDNF-201ENST00000314915 UQCRHP07919 91 aa11.82□□□□□ -0.52
BDNF-201ENST00000314915 MSNP26038 577 aaKnown RBP11.82□□□□□ -0.52
BDNF-201ENST00000314915 PANK2Q9BZ23 570 aa11.82□□□□□ -0.52
BDNF-201ENST00000314915 SOX12O15370 315 aa11.81□□□□□ -0.52
BDNF-201ENST00000314915 CCDC66A2RUB6 948 aa11.81□□□□□ -0.52
BDNF-201ENST00000314915 SLC4A3P48751 1232 aa11.81□□□□□ -0.52
BDNF-201ENST00000314915 ZSCAN30Q86W11 494 aa11.8□□□□□ -0.52
BDNF-201ENST00000314915 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
BDNF-201ENST00000314915 SETQ01105 290 aaPredicted RBP11.8□□□□□ -0.52
BDNF-201ENST00000314915 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
BDNF-201ENST00000314915 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
BDNF-201ENST00000314915 BECN1Q14457 450 aa11.79□□□□□ -0.52
BDNF-201ENST00000314915 TMC1Q8TDI8 760 aa11.79□□□□□ -0.52
BDNF-201ENST00000314915 R3HCC1Q9Y3T6 440 aaKnown RBP11.79□□□□□ -0.52
BDNF-201ENST00000314915 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
BDNF-201ENST00000314915 PHLDB1Q86UU1 1377 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 KCNJ4P48050 445 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 ZBTB22O15209 634 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 CSPP1Q1MSJ5 1256 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 NBPF20Q3BBV1 942 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
BDNF-201ENST00000314915 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
BDNF-201ENST00000314915 PSMD1Q99460 953 aa11.77□□□□□ -0.52
BDNF-201ENST00000314915 NGEFQ8N5V2 710 aa11.77□□□□□ -0.53
BDNF-201ENST00000314915 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
BDNF-201ENST00000314915 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
BDNF-201ENST00000314915 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
BDNF-201ENST00000314915 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
BDNF-201ENST00000314915 ZNF771Q7L3S4 317 aaPredicted RBP11.75□□□□□ -0.53
BDNF-201ENST00000314915 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms