RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 ZNF330Q9Y3S2 320 aaPredicted RBP26.69■■□□□ 1.86
KDM3B-201ENST00000314358 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
KDM3B-201ENST00000314358 SLKQ9H2G2 1235 aaPredicted RBP26.67■■□□□ 1.86
KDM3B-201ENST00000314358 NOC3LQ8WTT2 800 aaKnown RBP26.66■■□□□ 1.86
KDM3B-201ENST00000314358 PRM3Q9NNZ6 103 aa26.66■■□□□ 1.86
KDM3B-201ENST00000314358 MCCP23508 829 aa26.65■■□□□ 1.86
KDM3B-201ENST00000314358 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
KDM3B-201ENST00000314358 TNIKQ9UKE5 1360 aa26.64■■□□□ 1.86
KDM3B-201ENST00000314358 L1TD1Q5T7N2 865 aaKnown RBP26.64■■□□□ 1.85
KDM3B-201ENST00000314358 SRPK2P78362 688 aaKnown RBP26.61■■□□□ 1.85
KDM3B-201ENST00000314358 FOXD4L1Q9NU39 408 aa26.59■■□□□ 1.85
KDM3B-201ENST00000314358 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
KDM3B-201ENST00000314358 CHMP4BQ9H444 224 aaKnown RBP26.57■■□□□ 1.84
KDM3B-201ENST00000314358 RBM19Q9Y4C8 960 aaKnown RBP26.57■■□□□ 1.84
KDM3B-201ENST00000314358 MS4A1P11836 297 aa26.56■■□□□ 1.84
KDM3B-201ENST00000314358 HSP90B1P14625 803 aaKnown RBP26.56■■□□□ 1.84
KDM3B-201ENST00000314358 NOL8Q76FK4 1167 aaKnown RBP26.56■■□□□ 1.84
KDM3B-201ENST00000314358 CREBRFQ8IUR6 639 aa26.56■■□□□ 1.84
KDM3B-201ENST00000314358 STK26Q9P289 416 aa26.54■■□□□ 1.84
KDM3B-201ENST00000314358 KIAA2012Q0VF49 1180 aa26.54■■□□□ 1.84
KDM3B-201ENST00000314358 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
KDM3B-201ENST00000314358 MORC1Q86VD1 984 aa26.53■■□□□ 1.84
KDM3B-201ENST00000314358 KIAA1211Q6ZU35 1233 aa26.51■■□□□ 1.83
KDM3B-201ENST00000314358 RTF1Q92541 710 aaKnown RBP26.51■■□□□ 1.83
KDM3B-201ENST00000314358 ITPRIPQ8IWB1 547 aa26.49■■□□□ 1.83
KDM3B-201ENST00000314358 TMF1P82094 1093 aa26.48■■□□□ 1.83
KDM3B-201ENST00000314358 PAK3O75914 559 aaPredicted RBP26.47■■□□□ 1.83
KDM3B-201ENST00000314358 FOXD4L5Q5VV16 416 aaPredicted RBP26.47■■□□□ 1.83
KDM3B-201ENST00000314358 FOXD4L4Q8WXT5 416 aaPredicted RBP26.47■■□□□ 1.83
KDM3B-201ENST00000314358 TNNT3P45378 269 aaPredicted RBP26.46■■□□□ 1.83
KDM3B-201ENST00000314358 MFAP1P55081 439 aaKnown RBP26.46■■□□□ 1.83
KDM3B-201ENST00000314358 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
KDM3B-201ENST00000314358 CUX2O14529 1486 aa26.46■■□□□ 1.83
KDM3B-201ENST00000314358 A0A0U1RQG5 324 aaPredicted RBP26.45■■□□□ 1.83
KDM3B-201ENST00000314358 CHMP3Q9Y3E7 222 aa26.45■■□□□ 1.82
KDM3B-201ENST00000314358 CARMIL1Q5VZK9 1371 aa26.44■■□□□ 1.82
KDM3B-201ENST00000314358 GBP4Q96PP9 640 aa26.4■■□□□ 1.82
KDM3B-201ENST00000314358 FOXD1Q16676 465 aa26.4■■□□□ 1.82
KDM3B-201ENST00000314358 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.82
KDM3B-201ENST00000314358 TRIM6-TRIM34B2RNG4 842 aa26.38■■□□□ 1.81
KDM3B-201ENST00000314358 GGT6Q6P531 493 aa26.37■■□□□ 1.81
KDM3B-201ENST00000314358 FBXO3Q9UK99 471 aa26.37■■□□□ 1.81
KDM3B-201ENST00000314358 CSB-PGBD3P0DP91 1061 aa26.34■■□□□ 1.81
KDM3B-201ENST00000314358 RASSF8Q8NHQ8 419 aa26.33■■□□□ 1.81
KDM3B-201ENST00000314358 GORABQ5T7V8 394 aa26.33■■□□□ 1.8
KDM3B-201ENST00000314358 U2AF1L5P0DN76 240 aaPredicted RBP26.32■■□□□ 1.8
KDM3B-201ENST00000314358 U2AF1Q01081 240 aaKnown RBP eCLIP26.32■■□□□ 1.81e-7■■■□□ 14.6
KDM3B-201ENST00000314358 CCDC9Q9Y3X0 531 aaKnown RBP26.32■■□□□ 1.8
KDM3B-201ENST00000314358 WWC1Q8IX03 1113 aa26.31■■□□□ 1.8
KDM3B-201ENST00000314358 HSPA5P11021 654 aaKnown RBP26.31■■□□□ 1.8
KDM3B-201ENST00000314358 KANK1Q14678 1352 aa26.29■■□□□ 1.8
KDM3B-201ENST00000314358 CLUAP1Q96AJ1 413 aa26.29■■□□□ 1.8
KDM3B-201ENST00000314358 SOGA1O94964 1423 aa26.29■■□□□ 1.8
KDM3B-201ENST00000314358 SLC4A10Q6U841 1118 aa26.29■■□□□ 1.8
KDM3B-201ENST00000314358 GOLGA6L3A6NEY3 463 aa26.28■■□□□ 1.8
KDM3B-201ENST00000314358 FOXD4L6Q3SYB3 417 aaPredicted RBP26.28■■□□□ 1.8
KDM3B-201ENST00000314358 FOXD4L3Q6VB84 417 aaPredicted RBP26.28■■□□□ 1.8
KDM3B-201ENST00000314358 RCAN3Q9UKA8 241 aa26.28■■□□□ 1.8
KDM3B-201ENST00000314358 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
KDM3B-201ENST00000314358 TPM4P67936 248 aa26.25■■□□□ 1.79
KDM3B-201ENST00000314358 VPS53Q5VIR6 699 aa26.25■■□□□ 1.79
KDM3B-201ENST00000314358 GOLGA6L1Q8N7Z2 621 aa26.25■■□□□ 1.79
KDM3B-201ENST00000314358 TAF7LQ5H9L4 462 aa26.25■■□□□ 1.79
KDM3B-201ENST00000314358 IPO8O15397 1037 aaKnown RBP26.25■■□□□ 1.79
KDM3B-201ENST00000314358 TOMM22Q9NS69 142 aa26.24■■□□□ 1.79
KDM3B-201ENST00000314358 PATL2C9JE40 543 aaKnown RBP26.23■■□□□ 1.79
KDM3B-201ENST00000314358 PES1O00541 588 aaKnown RBP26.23■■□□□ 1.79
KDM3B-201ENST00000314358 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
KDM3B-201ENST00000314358 RWDD1Q9H446 243 aaPredicted RBP26.22■■□□□ 1.79
KDM3B-201ENST00000314358 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
KDM3B-201ENST00000314358 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
KDM3B-201ENST00000314358 SYAP1Q96A49 352 aaPredicted RBP26.21■■□□□ 1.79
KDM3B-201ENST00000314358 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
KDM3B-201ENST00000314358 NUTM2DQ5VT03 806 aaPredicted RBP26.19■■□□□ 1.78
KDM3B-201ENST00000314358 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
KDM3B-201ENST00000314358 HDGFL2Q7Z4V5 671 aaPredicted RBP26.19■■□□□ 1.78
KDM3B-201ENST00000314358 HTATSF1O43719 755 aaKnown RBP26.18■■□□□ 1.78
KDM3B-201ENST00000314358 CALD1Q05682 793 aaKnown RBP26.18■■□□□ 1.78
KDM3B-201ENST00000314358 KTN1Q86UP2 1357 aaKnown RBP26.18■■□□□ 1.78
KDM3B-201ENST00000314358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.16■■□□□ 1.78
KDM3B-201ENST00000314358 SLC4A3P48751 1232 aa26.16■■□□□ 1.78
KDM3B-201ENST00000314358 CCAR2Q8N163 923 aaKnown RBP26.16■■□□□ 1.78
KDM3B-201ENST00000314358 CARMIL2Q6F5E8 1435 aa26.15■■□□□ 1.78
KDM3B-201ENST00000314358 CFAP44Q96MT7 982 aa26.14■■□□□ 1.78
KDM3B-201ENST00000314358 HDGFP51858 240 aaKnown RBP26.14■■□□□ 1.77
KDM3B-201ENST00000314358 G3V3G9 751 aa26.14■■□□□ 1.77
KDM3B-201ENST00000314358 DCAF8Q5TAQ9 597 aa26.14■■□□□ 1.77
KDM3B-201ENST00000314358 LTV1Q96GA3 475 aaPredicted RBP26.13■■□□□ 1.77
KDM3B-201ENST00000314358 PTMSP20962 102 aa26.12■■□□□ 1.77
KDM3B-201ENST00000314358 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
KDM3B-201ENST00000314358 NUTM2FA1L443 756 aa26.11■■□□□ 1.77
KDM3B-201ENST00000314358 TMX4Q9H1E5 349 aaPredicted RBP26.11■■□□□ 1.77
KDM3B-201ENST00000314358 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
KDM3B-201ENST00000314358 MARCH6O60337 910 aa26.1■■□□□ 1.77
KDM3B-201ENST00000314358 STK31Q9BXU1 1019 aa26.1■■□□□ 1.77
KDM3B-201ENST00000314358 GPATCH3Q96I76 525 aa26.09■■□□□ 1.77
KDM3B-201ENST00000314358 FRAT2O75474 233 aaPredicted RBP26.08■■□□□ 1.77
KDM3B-201ENST00000314358 CEP89Q96ST8 783 aa26.08■■□□□ 1.77
KDM3B-201ENST00000314358 PKD2Q13563 968 aa26.08■■□□□ 1.76
KDM3B-201ENST00000314358 SF3A1Q15459 793 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms