RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
SEC16A-204ENST00000313084 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC16A-204ENST00000313084 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEC16A-204ENST00000313084 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
SEC16A-204ENST00000313084 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
SEC16A-204ENST00000313084 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
SEC16A-204ENST00000313084 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
SEC16A-204ENST00000313084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
SEC16A-204ENST00000313084 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
SEC16A-204ENST00000313084 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
SEC16A-204ENST00000313084 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
SEC16A-204ENST00000313084 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
SEC16A-204ENST00000313084 WDR62O43379 1518 aa13.88□□□□□ -0.19
SEC16A-204ENST00000313084 PKD2Q13563 968 aa13.88□□□□□ -0.19
SEC16A-204ENST00000313084 CCDC184Q52MB2 194 aa13.87□□□□□ -0.19
SEC16A-204ENST00000313084 NEFLP07196 543 aa13.87□□□□□ -0.19
SEC16A-204ENST00000313084 DAPK1P53355 1430 aa13.86□□□□□ -0.19
SEC16A-204ENST00000313084 ABCC5O15440 1437 aa13.86□□□□□ -0.19
SEC16A-204ENST00000313084 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
SEC16A-204ENST00000313084 KIAA0556O60303 1618 aa13.84□□□□□ -0.19
SEC16A-204ENST00000313084 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
SEC16A-204ENST00000313084 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
SEC16A-204ENST00000313084 DENND4BO75064 1496 aaPredicted RBP13.83□□□□□ -0.2
SEC16A-204ENST00000313084 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
SEC16A-204ENST00000313084 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
SEC16A-204ENST00000313084 MRS2Q9HD23 443 aa13.81□□□□□ -0.2
SEC16A-204ENST00000313084 NUP155O75694 1391 aa13.8□□□□□ -0.2
SEC16A-204ENST00000313084 CEP170Q5SW79 1584 aa13.8□□□□□ -0.2
SEC16A-204ENST00000313084 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
SEC16A-204ENST00000313084 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
SEC16A-204ENST00000313084 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
SEC16A-204ENST00000313084 TROQ12816 1431 aaPredicted RBP13.79□□□□□ -0.2
SEC16A-204ENST00000313084 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
SEC16A-204ENST00000313084 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
SEC16A-204ENST00000313084 CAMSAP2Q08AD1 1489 aa13.78□□□□□ -0.2
SEC16A-204ENST00000313084 KIF14Q15058 1648 aa13.77□□□□□ -0.2
SEC16A-204ENST00000313084 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
SEC16A-204ENST00000313084 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
SEC16A-204ENST00000313084 ANKRD30BQ9BXX2 1392 aa13.76□□□□□ -0.21
SEC16A-204ENST00000313084 GPATCH8Q9UKJ3 1502 aaKnown RBP13.76□□□□□ -0.21
SEC16A-204ENST00000313084 PTPRGP23470 1445 aa13.75□□□□□ -0.21
SEC16A-204ENST00000313084 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
SEC16A-204ENST00000313084 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
SEC16A-204ENST00000313084 SALL2Q9Y467 1007 aaPredicted RBP13.74□□□□□ -0.21
SEC16A-204ENST00000313084 ANKRD30AQ9BXX3 1397 aa13.73□□□□□ -0.21
SEC16A-204ENST00000313084 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
SEC16A-204ENST00000313084 CARD11Q9BXL7 1154 aa13.73□□□□□ -0.21
SEC16A-204ENST00000313084 KDM5BQ9UGL1 1544 aa13.72□□□□□ -0.21
SEC16A-204ENST00000313084 ANKRD50Q9ULJ7 1429 aa13.72□□□□□ -0.21
SEC16A-204ENST00000313084 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
SEC16A-204ENST00000313084 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.22
SEC16A-204ENST00000313084 ATP10BO94823 1461 aa13.71□□□□□ -0.22
SEC16A-204ENST00000313084 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
SEC16A-204ENST00000313084 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
SEC16A-204ENST00000313084 KIF15Q9NS87 1388 aa13.69□□□□□ -0.22
SEC16A-204ENST00000313084 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
SEC16A-204ENST00000313084 GCC2Q8IWJ2 1684 aa13.68□□□□□ -0.22
SEC16A-204ENST00000313084 SENP3Q9H4L4 574 aaPredicted RBP13.68□□□□□ -0.22
SEC16A-204ENST00000313084 C9orf84Q5VXU9 1444 aa13.68□□□□□ -0.22
SEC16A-204ENST00000313084 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
SEC16A-204ENST00000313084 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
SEC16A-204ENST00000313084 USP47Q96K76 1375 aa13.67□□□□□ -0.22
SEC16A-204ENST00000313084 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
SEC16A-204ENST00000313084 PZPP20742 1482 aa13.66□□□□□ -0.22
SEC16A-204ENST00000313084 NUP160Q12769 1436 aa13.66□□□□□ -0.22
SEC16A-204ENST00000313084 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.23
SEC16A-204ENST00000313084 KIAA1107Q9UPP5 1409 aa13.63□□□□□ -0.23
SEC16A-204ENST00000313084 TEX14Q8IWB6 1497 aa13.62□□□□□ -0.23
SEC16A-204ENST00000313084 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
SEC16A-204ENST00000313084 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
SEC16A-204ENST00000313084 AFAP1Q8N556 730 aa13.6□□□□□ -0.23
SEC16A-204ENST00000313084 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
SEC16A-204ENST00000313084 ERCC6L2Q5T890 1561 aa13.58□□□□□ -0.23
SEC16A-204ENST00000313084 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.23
SEC16A-204ENST00000313084 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
SEC16A-204ENST00000313084 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
SEC16A-204ENST00000313084 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
SEC16A-204ENST00000313084 ABCC10Q5T3U5 1492 aa13.54□□□□□ -0.24
SEC16A-204ENST00000313084 ABCA8O94911 1581 aa13.53□□□□□ -0.24
SEC16A-204ENST00000313084 SYCP2Q9BX26 1530 aa13.53□□□□□ -0.24
SEC16A-204ENST00000313084 CCDC144AA2RUR9 1427 aa13.53□□□□□ -0.24
SEC16A-204ENST00000313084 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.24
SEC16A-204ENST00000313084 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
SEC16A-204ENST00000313084 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
SEC16A-204ENST00000313084 PLEKHH2Q8IVE3 1493 aa13.51□□□□□ -0.25
SEC16A-204ENST00000313084 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
SEC16A-204ENST00000313084 EFCAB2Q5VUJ9 269 aa13.5□□□□□ -0.25
SEC16A-204ENST00000313084 CCDC141Q6ZP82 1450 aa13.49□□□□□ -0.25
SEC16A-204ENST00000313084 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
SEC16A-204ENST00000313084 CHD1O14646 1710 aa13.48□□□□□ -0.25
SEC16A-204ENST00000313084 ADGRL2O95490 1459 aa13.48□□□□□ -0.25
SEC16A-204ENST00000313084 KIF3BO15066 747 aa13.47□□□□□ -0.25
SEC16A-204ENST00000313084 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
SEC16A-204ENST00000313084 TTC37Q6PGP7 1564 aa13.46□□□□□ -0.25
SEC16A-204ENST00000313084 SAMD9LQ8IVG5 1584 aa13.46□□□□□ -0.25
SEC16A-204ENST00000313084 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
SEC16A-204ENST00000313084 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
SEC16A-204ENST00000313084 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
SEC16A-204ENST00000313084 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
SEC16A-204ENST00000313084 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms