RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 CDR1P51861 262 aa13.17□□□□□ -0.3
SEC16A-203ENST00000313050 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
SEC16A-203ENST00000313050 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
SEC16A-203ENST00000313050 TPM2P07951 284 aa13.17□□□□□ -0.3
SEC16A-203ENST00000313050 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
SEC16A-203ENST00000313050 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
SEC16A-203ENST00000313050 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-203ENST00000313050 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
SEC16A-203ENST00000313050 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
SEC16A-203ENST00000313050 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
SEC16A-203ENST00000313050 KIF16BQ96L93 1317 aa13.14□□□□□ -0.31
SEC16A-203ENST00000313050 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
SEC16A-203ENST00000313050 USP8P40818 1118 aa13.13□□□□□ -0.31
SEC16A-203ENST00000313050 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
SEC16A-203ENST00000313050 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
SEC16A-203ENST00000313050 LEKR1Q6ZMV7 388 aa13.13□□□□□ -0.31
SEC16A-203ENST00000313050 ZNF592Q92610 1267 aa13.12□□□□□ -0.31
SEC16A-203ENST00000313050 KIAA1211Q6ZU35 1233 aa13.12□□□□□ -0.31
SEC16A-203ENST00000313050 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
SEC16A-203ENST00000313050 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
SEC16A-203ENST00000313050 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
SEC16A-203ENST00000313050 TPM1P09493 284 aa13.11□□□□□ -0.31
SEC16A-203ENST00000313050 TSHZ2Q9NRE2 1034 aa13.1□□□□□ -0.31
SEC16A-203ENST00000313050 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-203ENST00000313050 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
SEC16A-203ENST00000313050 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
SEC16A-203ENST00000313050 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
SEC16A-203ENST00000313050 ZRSR2Q15696 482 aaKnown RBP13.08□□□□□ -0.32
SEC16A-203ENST00000313050 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
SEC16A-203ENST00000313050 KIF3AQ9Y496 699 aa13.06□□□□□ -0.32
SEC16A-203ENST00000313050 GOLGA2Q08379 1002 aa13.06□□□□□ -0.32
SEC16A-203ENST00000313050 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
SEC16A-203ENST00000313050 GOLGA6L7A0A1B0GV03 622 aa13.04□□□□□ -0.32
SEC16A-203ENST00000313050 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
SEC16A-203ENST00000313050 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
SEC16A-203ENST00000313050 KIAA0754O94854 1291 aa13.03□□□□□ -0.32
SEC16A-203ENST00000313050 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
SEC16A-203ENST00000313050 GIMAP7Q8NHV1 300 aa13.03□□□□□ -0.32
SEC16A-203ENST00000313050 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
SEC16A-203ENST00000313050 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.32
SEC16A-203ENST00000313050 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.32
SEC16A-203ENST00000313050 IPO7O95373 1038 aaKnown RBP13.02□□□□□ -0.33
SEC16A-203ENST00000313050 TPD52L1Q16890 204 aaPredicted RBP13.01□□□□□ -0.33
SEC16A-203ENST00000313050 FBLN2P98095 1184 aa13.01□□□□□ -0.33
SEC16A-203ENST00000313050 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
SEC16A-203ENST00000313050 BECN2A8MW95 431 aa13.01□□□□□ -0.33
SEC16A-203ENST00000313050 CAGE1Q8TC20 777 aa13□□□□□ -0.33
SEC16A-203ENST00000313050 ST18O60284 1047 aa13□□□□□ -0.33
SEC16A-203ENST00000313050 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
SEC16A-203ENST00000313050 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
SEC16A-203ENST00000313050 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
SEC16A-203ENST00000313050 MNS1Q8NEH6 495 aa13□□□□□ -0.33
SEC16A-203ENST00000313050 ATP6V1DQ9Y5K8 247 aa13□□□□□ -0.33
SEC16A-203ENST00000313050 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
SEC16A-203ENST00000313050 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
SEC16A-203ENST00000313050 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
SEC16A-203ENST00000313050 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
SEC16A-203ENST00000313050 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
SEC16A-203ENST00000313050 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
SEC16A-203ENST00000313050 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
SEC16A-203ENST00000313050 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
SEC16A-203ENST00000313050 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
SEC16A-203ENST00000313050 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
SEC16A-203ENST00000313050 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
SEC16A-203ENST00000313050 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
SEC16A-203ENST00000313050 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.96□□□□□ -0.33
SEC16A-203ENST00000313050 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
SEC16A-203ENST00000313050 IFT57Q9NWB7 429 aa12.96□□□□□ -0.34
SEC16A-203ENST00000313050 CCDC39Q9UFE4 941 aa12.96□□□□□ -0.34
SEC16A-203ENST00000313050 A0A0G2JS52 829 aa12.95□□□□□ -0.34
SEC16A-203ENST00000313050 RASSF8Q8NHQ8 419 aa12.95□□□□□ -0.34
SEC16A-203ENST00000313050 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
SEC16A-203ENST00000313050 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
SEC16A-203ENST00000313050 ARID3CA6NKF2 412 aa12.95□□□□□ -0.34
SEC16A-203ENST00000313050 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
SEC16A-203ENST00000313050 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
SEC16A-203ENST00000313050 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
SEC16A-203ENST00000313050 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
SEC16A-203ENST00000313050 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
SEC16A-203ENST00000313050 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
SEC16A-203ENST00000313050 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
SEC16A-203ENST00000313050 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
SEC16A-203ENST00000313050 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
SEC16A-203ENST00000313050 DDX11Q96FC9 970 aa12.91□□□□□ -0.34
SEC16A-203ENST00000313050 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
SEC16A-203ENST00000313050 RALBP1Q15311 655 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
SEC16A-203ENST00000313050 AXDND1Q5T1B0 1012 aaPredicted RBP12.9□□□□□ -0.35
SEC16A-203ENST00000313050 SSR1P43307 286 aaKnown RBP12.89□□□□□ -0.35
SEC16A-203ENST00000313050 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
SEC16A-203ENST00000313050 IPO8O15397 1037 aaKnown RBP12.89□□□□□ -0.35
SEC16A-203ENST00000313050 CT47B1P0C2W7 299 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-203ENST00000313050 CCDC173Q0VFZ6 552 aa12.89□□□□□ -0.35
SEC16A-203ENST00000313050 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
SEC16A-203ENST00000313050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC16A-203ENST00000313050 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms