RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 BCANQ96GW7 911 aa13.58□□□□□ -0.24
RBFOX1-201ENST00000311745 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-201ENST00000311745 ABCA8O94911 1581 aa13.57□□□□□ -0.24
RBFOX1-201ENST00000311745 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
RBFOX1-201ENST00000311745 CHD1O14646 1710 aa13.56□□□□□ -0.24
RBFOX1-201ENST00000311745 MIER1Q8N108 512 aa13.56□□□□□ -0.24
RBFOX1-201ENST00000311745 PLB1Q6P1J6 1458 aa13.56□□□□□ -0.24
RBFOX1-201ENST00000311745 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
RBFOX1-201ENST00000311745 AKNAQ7Z591 1439 aa13.55□□□□□ -0.24
RBFOX1-201ENST00000311745 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
RBFOX1-201ENST00000311745 SIN3AQ96ST3 1273 aa13.54□□□□□ -0.24
RBFOX1-201ENST00000311745 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
RBFOX1-201ENST00000311745 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
RBFOX1-201ENST00000311745 RBM19Q9Y4C8 960 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-201ENST00000311745 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
RBFOX1-201ENST00000311745 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
RBFOX1-201ENST00000311745 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-201ENST00000311745 PLPPR3Q6T4P5 718 aa13.49□□□□□ -0.25
RBFOX1-201ENST00000311745 ABCC5O15440 1437 aa13.48□□□□□ -0.25
RBFOX1-201ENST00000311745 DAPK1P53355 1430 aa13.48□□□□□ -0.25
RBFOX1-201ENST00000311745 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
RBFOX1-201ENST00000311745 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-201ENST00000311745 GPATCH8Q9UKJ3 1502 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-201ENST00000311745 MSH5O43196 834 aa13.44□□□□□ -0.26
RBFOX1-201ENST00000311745 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
RBFOX1-201ENST00000311745 ATP10BO94823 1461 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 ERCC6L2Q5T890 1561 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
RBFOX1-201ENST00000311745 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
RBFOX1-201ENST00000311745 A0A0U1RQG5 324 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-201ENST00000311745 PPP1R15AO75807 674 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-201ENST00000311745 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-201ENST00000311745 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-201ENST00000311745 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
RBFOX1-201ENST00000311745 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
RBFOX1-201ENST00000311745 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
RBFOX1-201ENST00000311745 PZPP20742 1482 aa13.38□□□□□ -0.27
RBFOX1-201ENST00000311745 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
RBFOX1-201ENST00000311745 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
RBFOX1-201ENST00000311745 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
RBFOX1-201ENST00000311745 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
RBFOX1-201ENST00000311745 NBR1Q14596 966 aa13.37□□□□□ -0.27
RBFOX1-201ENST00000311745 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
RBFOX1-201ENST00000311745 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
RBFOX1-201ENST00000311745 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
RBFOX1-201ENST00000311745 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
RBFOX1-201ENST00000311745 NCOA1Q15788 1441 aa13.34□□□□□ -0.27
RBFOX1-201ENST00000311745 TTC37Q6PGP7 1564 aa13.33□□□□□ -0.27
RBFOX1-201ENST00000311745 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
RBFOX1-201ENST00000311745 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
RBFOX1-201ENST00000311745 SHANK2Q9UPX8 1470 aa13.32□□□□□ -0.28
RBFOX1-201ENST00000311745 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-201ENST00000311745 FBLN2P98095 1184 aa13.31□□□□□ -0.28
RBFOX1-201ENST00000311745 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
RBFOX1-201ENST00000311745 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-201ENST00000311745 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
RBFOX1-201ENST00000311745 NEFLP07196 543 aa13.3□□□□□ -0.28
RBFOX1-201ENST00000311745 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
RBFOX1-201ENST00000311745 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
RBFOX1-201ENST00000311745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
RBFOX1-201ENST00000311745 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.28
RBFOX1-201ENST00000311745 ABCC2Q92887 1545 aa13.27□□□□□ -0.29
RBFOX1-201ENST00000311745 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-201ENST00000311745 FOXD1Q16676 465 aa13.26□□□□□ -0.29
RBFOX1-201ENST00000311745 PDE4CQ08493 712 aa13.26□□□□□ -0.29
RBFOX1-201ENST00000311745 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
RBFOX1-201ENST00000311745 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
RBFOX1-201ENST00000311745 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-201ENST00000311745 MYO5CQ9NQX4 1742 aa13.25□□□□□ -0.29
RBFOX1-201ENST00000311745 PTPRGP23470 1445 aa13.24□□□□□ -0.29
RBFOX1-201ENST00000311745 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
RBFOX1-201ENST00000311745 FKBP8Q14318 412 aa13.24□□□□□ -0.29
RBFOX1-201ENST00000311745 CDK11AQ9UQ88 783 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-201ENST00000311745 SPATA31E1Q6ZUB1 1445 aa13.22□□□□□ -0.29
RBFOX1-201ENST00000311745 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-201ENST00000311745 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.29
RBFOX1-201ENST00000311745 UNC13BO14795 1591 aa13.21□□□□□ -0.3
RBFOX1-201ENST00000311745 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.3
RBFOX1-201ENST00000311745 GLIPR1L2Q4G1C9 344 aa13.2□□□□□ -0.3
RBFOX1-201ENST00000311745 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
RBFOX1-201ENST00000311745 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
RBFOX1-201ENST00000311745 SYCP2Q9BX26 1530 aa13.2□□□□□ -0.3
RBFOX1-201ENST00000311745 UHRF1BP1LA0JNW5 1464 aa13.2□□□□□ -0.3
RBFOX1-201ENST00000311745 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
RBFOX1-201ENST00000311745 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
RBFOX1-201ENST00000311745 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
RBFOX1-201ENST00000311745 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
RBFOX1-201ENST00000311745 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
RBFOX1-201ENST00000311745 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
RBFOX1-201ENST00000311745 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
RBFOX1-201ENST00000311745 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
RBFOX1-201ENST00000311745 KDM5CP41229 1560 aa13.16□□□□□ -0.3
RBFOX1-201ENST00000311745 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
RBFOX1-201ENST00000311745 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
RBFOX1-201ENST00000311745 PLEKHD1A6NEE1 506 aa13.15□□□□□ -0.3
RBFOX1-201ENST00000311745 C11orf95C9JLR9 678 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms