RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 LRRC9Q6ZRR7 1453 aa28.17■■■□□ 2.1
CCS-201ENST00000310190 DENND4BO75064 1496 aaPredicted RBP28.15■■■□□ 2.1
CCS-201ENST00000310190 RICTORQ6R327 1708 aa28.15■■■□□ 2.1
CCS-201ENST00000310190 FRMPD1Q5SYB0 1578 aa28.15■■■□□ 2.1
CCS-201ENST00000310190 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
CCS-201ENST00000310190 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
CCS-201ENST00000310190 ADGRL1O94910 1474 aa28.12■■■□□ 2.09
CCS-201ENST00000310190 ZMYM4Q5VZL5 1548 aa28.11■■■□□ 2.09
CCS-201ENST00000310190 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
CCS-201ENST00000310190 POGZQ7Z3K3 1410 aa28.08■■■□□ 2.09
CCS-201ENST00000310190 SCAPERQ9BY12 1400 aa28.08■■■□□ 2.09
CCS-201ENST00000310190 NCOA2Q15596 1464 aa28.07■■■□□ 2.08
CCS-201ENST00000310190 ITSN2Q9NZM3 1697 aa28.07■■■□□ 2.08
CCS-201ENST00000310190 RAPGEF3O95398 923 aa28.06■■■□□ 2.08
CCS-201ENST00000310190 MAGI2Q86UL8 1455 aa28.06■■■□□ 2.08
CCS-201ENST00000310190 ABCC1P33527 1531 aa28.05■■■□□ 2.08
CCS-201ENST00000310190 KIAA1107Q9UPP5 1409 aa28.04■■■□□ 2.08
CCS-201ENST00000310190 KDM5CP41229 1560 aa28.03■■■□□ 2.08
CCS-201ENST00000310190 ZNF518AQ6AHZ1 1483 aa28.02■■■□□ 2.08
CCS-201ENST00000310190 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
CCS-201ENST00000310190 PLEKHH2Q8IVE3 1493 aa28.02■■■□□ 2.08
CCS-201ENST00000310190 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
CCS-201ENST00000310190 SAMD9LQ8IVG5 1584 aa28■■■□□ 2.07
CCS-201ENST00000310190 APLP2Q06481 763 aa28■■■□□ 2.07
CCS-201ENST00000310190 CFDP1Q9UEE9 299 aaPredicted RBP27.99■■■□□ 2.07
CCS-201ENST00000310190 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
CCS-201ENST00000310190 ARHGEF40Q8TER5 1519 aa27.96■■■□□ 2.07
CCS-201ENST00000310190 MLH3Q9UHC1 1453 aa27.94■■■□□ 2.06
CCS-201ENST00000310190 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
CCS-201ENST00000310190 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
CCS-201ENST00000310190 ZFYVE16Q7Z3T8 1539 aa27.89■■■□□ 2.06
CCS-201ENST00000310190 MYOM3Q5VTT5 1437 aa27.89■■■□□ 2.06
CCS-201ENST00000310190 MBD5Q9P267 1494 aa27.89■■■□□ 2.05
CCS-201ENST00000310190 SYCP2Q9BX26 1530 aa27.88■■■□□ 2.05
CCS-201ENST00000310190 HECW2Q9P2P5 1572 aa27.87■■■□□ 2.05
CCS-201ENST00000310190 AFAP1Q8N556 730 aa27.87■■■□□ 2.05
CCS-201ENST00000310190 RSPH4AQ5TD94 716 aa27.84■■■□□ 2.05
CCS-201ENST00000310190 YEATS2Q9ULM3 1422 aa27.84■■■□□ 2.05
CCS-201ENST00000310190 REREQ9P2R6 1566 aa27.83■■■□□ 2.05
CCS-201ENST00000310190 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
CCS-201ENST00000310190 ATP10AO60312 1499 aa27.82■■■□□ 2.04
CCS-201ENST00000310190 CAMSAP2Q08AD1 1489 aa27.82■■■□□ 2.04
CCS-201ENST00000310190 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
CCS-201ENST00000310190 KIDINS220Q9ULH0 1771 aa27.81■■■□□ 2.04
CCS-201ENST00000310190 ZNF644Q9H582 1327 aaPredicted RBP27.8■■■□□ 2.04
CCS-201ENST00000310190 HNRNPMP52272 730 aaKnown RBP eCLIP27.79■■■□□ 2.04
CCS-201ENST00000310190 INO80Q9ULG1 1556 aaPredicted RBP27.77■■■□□ 2.04
CCS-201ENST00000310190 DIP2CQ9Y2E4 1556 aa27.77■■■□□ 2.04
CCS-201ENST00000310190 RTEL1-TNFRSF6BF6WH68 1400 aa27.77■■■□□ 2.04
CCS-201ENST00000310190 KDM4FA0A1W2PPD8 638 aa27.77■■■□□ 2.04
CCS-201ENST00000310190 C9orf84Q5VXU9 1444 aa27.75■■■□□ 2.03
CCS-201ENST00000310190 CCDC141Q6ZP82 1450 aa27.74■■■□□ 2.03
CCS-201ENST00000310190 ABCA6Q8N139 1617 aa27.74■■■□□ 2.03
CCS-201ENST00000310190 TCOF1Q13428 1488 aaKnown RBP27.73■■■□□ 2.03
CCS-201ENST00000310190 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
CCS-201ENST00000310190 SPAG9O60271 1321 aaKnown RBP27.72■■■□□ 2.03
CCS-201ENST00000310190 FGD6Q6ZV73 1430 aa27.72■■■□□ 2.03
CCS-201ENST00000310190 AGLP35573 1532 aa27.72■■■□□ 2.03
CCS-201ENST00000310190 BCORL1Q5H9F3 1711 aa27.71■■■□□ 2.03
CCS-201ENST00000310190 SIGLEC1Q9BZZ2 1709 aa27.7■■■□□ 2.03
CCS-201ENST00000310190 ADAMTSL3P82987 1691 aa27.7■■■□□ 2.02
CCS-201ENST00000310190 PTPN23Q9H3S7 1636 aa27.68■■■□□ 2.02
CCS-201ENST00000310190 MAST1Q9Y2H9 1570 aa27.67■■■□□ 2.02
CCS-201ENST00000310190 PLXNC1O60486 1568 aa27.64■■■□□ 2.01
CCS-201ENST00000310190 ADGBQ8N7X0 1667 aa27.62■■■□□ 2.01
CCS-201ENST00000310190 SHANK2Q9UPX8 1470 aa27.6■■■□□ 2.01
CCS-201ENST00000310190 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
CCS-201ENST00000310190 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
CCS-201ENST00000310190 DNMT1P26358 1616 aaKnown RBP27.58■■■□□ 2.01
CCS-201ENST00000310190 A2MP01023 1474 aa27.57■■■□□ 2
CCS-201ENST00000310190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.57■■■□□ 2
CCS-201ENST00000310190 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
CCS-201ENST00000310190 CROCC2H7BZ55 1655 aa27.56■■■□□ 2
CCS-201ENST00000310190 MYT1LQ9UL68 1186 aa27.55■■■□□ 2
CCS-201ENST00000310190 ABCC5O15440 1437 aa27.55■■■□□ 2
CCS-201ENST00000310190 DHX29Q7Z478 1369 aaKnown RBP27.54■■■□□ 2
CCS-201ENST00000310190 MADDQ8WXG6 1647 aa27.52■■■□□ 2
CCS-201ENST00000310190 DAPK1P53355 1430 aa27.51■■□□□ 1.99
CCS-201ENST00000310190 PTPRMP28827 1452 aa27.47■■□□□ 1.99
CCS-201ENST00000310190 PPP6R1Q9UPN7 881 aa27.47■■□□□ 1.99
CCS-201ENST00000310190 FER1L4A9Z1Z3 1794 aa27.46■■□□□ 1.99
CCS-201ENST00000310190 ADGRL2O95490 1459 aa27.44■■□□□ 1.98
CCS-201ENST00000310190 RRBP1Q9P2E9 1410 aaKnown RBP27.44■■□□□ 1.98
CCS-201ENST00000310190 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
CCS-201ENST00000310190 EIF2AK4Q9P2K8 1649 aaKnown RBP27.41■■□□□ 1.98
CCS-201ENST00000310190 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
CCS-201ENST00000310190 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
CCS-201ENST00000310190 RIMS1Q86UR5 1692 aaKnown RBP27.4■■□□□ 1.98
CCS-201ENST00000310190 NCOA1Q15788 1441 aa27.39■■□□□ 1.97
CCS-201ENST00000310190 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
CCS-201ENST00000310190 ANKRD30AQ9BXX3 1397 aa27.35■■□□□ 1.97
CCS-201ENST00000310190 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
CCS-201ENST00000310190 MLECQ14165 292 aa27.35■■□□□ 1.97
CCS-201ENST00000310190 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
CCS-201ENST00000310190 KIF15Q9NS87 1388 aa27.35■■□□□ 1.97
CCS-201ENST00000310190 ERBINQ96RT1 1412 aa27.34■■□□□ 1.97
CCS-201ENST00000310190 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
CCS-201ENST00000310190 ROCK1Q13464 1354 aa27.33■■□□□ 1.97
CCS-201ENST00000310190 PTPRKQ15262 1439 aa27.31■■□□□ 1.96
CCS-201ENST00000310190 SETD1BQ9UPS6 1966 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms