RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PREX2Q70Z35 1606 aa14.21□□□□□ -0.13
PDE4D-201ENST00000309641 KDM6BO15054 1643 aa14.21□□□□□ -0.13
PDE4D-201ENST00000309641 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
PDE4D-201ENST00000309641 NEO1Q92859 1461 aa14.2□□□□□ -0.14
PDE4D-201ENST00000309641 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
PDE4D-201ENST00000309641 RAPGEF3O95398 923 aa14.19□□□□□ -0.14
PDE4D-201ENST00000309641 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
PDE4D-201ENST00000309641 ARAP3Q8WWN8 1544 aa14.19□□□□□ -0.14
PDE4D-201ENST00000309641 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
PDE4D-201ENST00000309641 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
PDE4D-201ENST00000309641 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
PDE4D-201ENST00000309641 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
PDE4D-201ENST00000309641 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
PDE4D-201ENST00000309641 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
PDE4D-201ENST00000309641 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
PDE4D-201ENST00000309641 CFAP74Q9C0B2 1584 aa14.15□□□□□ -0.14
PDE4D-201ENST00000309641 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
PDE4D-201ENST00000309641 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
PDE4D-201ENST00000309641 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
PDE4D-201ENST00000309641 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■□□ 14.7
PDE4D-201ENST00000309641 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
PDE4D-201ENST00000309641 AFAP1Q8N556 730 aa14.12□□□□□ -0.15
PDE4D-201ENST00000309641 ABCC1P33527 1531 aa14.12□□□□□ -0.15
PDE4D-201ENST00000309641 TRAPPC8Q9Y2L5 1435 aa14.11□□□□□ -0.15
PDE4D-201ENST00000309641 RICTORQ6R327 1708 aa14.11□□□□□ -0.15
PDE4D-201ENST00000309641 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
PDE4D-201ENST00000309641 POGZQ7Z3K3 1410 aa14.1□□□□□ -0.15
PDE4D-201ENST00000309641 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
PDE4D-201ENST00000309641 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.16
PDE4D-201ENST00000309641 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
PDE4D-201ENST00000309641 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
PDE4D-201ENST00000309641 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
PDE4D-201ENST00000309641 YEATS2Q9ULM3 1422 aa14.06□□□□□ -0.16
PDE4D-201ENST00000309641 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
PDE4D-201ENST00000309641 PLEKHH2Q8IVE3 1493 aa14.05□□□□□ -0.16
PDE4D-201ENST00000309641 PTPN23Q9H3S7 1636 aa14.04□□□□□ -0.16
PDE4D-201ENST00000309641 KDM5CP41229 1560 aa14.04□□□□□ -0.16
PDE4D-201ENST00000309641 ZMYM4Q5VZL5 1548 aa14.03□□□□□ -0.16
PDE4D-201ENST00000309641 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
PDE4D-201ENST00000309641 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
PDE4D-201ENST00000309641 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
PDE4D-201ENST00000309641 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
PDE4D-201ENST00000309641 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 CCDC141Q6ZP82 1450 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 HECW2Q9P2P5 1572 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
PDE4D-201ENST00000309641 ABCC5O15440 1437 aa13.98□□□□□ -0.17
PDE4D-201ENST00000309641 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
PDE4D-201ENST00000309641 ARHGEF40Q8TER5 1519 aa13.98□□□□□ -0.17
PDE4D-201ENST00000309641 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
PDE4D-201ENST00000309641 SIGLEC1Q9BZZ2 1709 aa13.97□□□□□ -0.17
PDE4D-201ENST00000309641 ATP7AQ04656 1500 aa13.97□□□□□ -0.17
PDE4D-201ENST00000309641 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.17
PDE4D-201ENST00000309641 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.17
PDE4D-201ENST00000309641 DAPK1P53355 1430 aa13.95□□□□□ -0.18
PDE4D-201ENST00000309641 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
PDE4D-201ENST00000309641 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
PDE4D-201ENST00000309641 DNMT1P26358 1616 aaKnown RBP13.95□□□□□ -0.18
PDE4D-201ENST00000309641 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
PDE4D-201ENST00000309641 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
PDE4D-201ENST00000309641 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
PDE4D-201ENST00000309641 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
PDE4D-201ENST00000309641 ITGAEP38570 1179 aa13.94□□□□□ -0.18
PDE4D-201ENST00000309641 ATP10AO60312 1499 aa13.94□□□□□ -0.18
PDE4D-201ENST00000309641 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
PDE4D-201ENST00000309641 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
PDE4D-201ENST00000309641 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
PDE4D-201ENST00000309641 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
PDE4D-201ENST00000309641 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
PDE4D-201ENST00000309641 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
PDE4D-201ENST00000309641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.19
PDE4D-201ENST00000309641 MLECQ14165 292 aa13.89□□□□□ -0.19
PDE4D-201ENST00000309641 RRP7BPQ9NSQ0 103 aa13.89□□□□□ -0.19
PDE4D-201ENST00000309641 SHANK2Q9UPX8 1470 aa13.89□□□□□ -0.19
PDE4D-201ENST00000309641 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
PDE4D-201ENST00000309641 A2MP01023 1474 aa13.88□□□□□ -0.19
PDE4D-201ENST00000309641 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
PDE4D-201ENST00000309641 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
PDE4D-201ENST00000309641 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
PDE4D-201ENST00000309641 REREQ9P2R6 1566 aa13.86□□□□□ -0.19
PDE4D-201ENST00000309641 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
PDE4D-201ENST00000309641 KIF15Q9NS87 1388 aa13.85□□□□□ -0.19
PDE4D-201ENST00000309641 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
PDE4D-201ENST00000309641 ANKRD30AQ9BXX3 1397 aa13.84□□□□□ -0.19
PDE4D-201ENST00000309641 BCORL1Q5H9F3 1711 aa13.84□□□□□ -0.19
PDE4D-201ENST00000309641 AGLP35573 1532 aa13.83□□□□□ -0.19
PDE4D-201ENST00000309641 KIF3BO15066 747 aa13.83□□□□□ -0.2
PDE4D-201ENST00000309641 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
PDE4D-201ENST00000309641 GGT6Q6P531 493 aa13.81□□□□□ -0.2
PDE4D-201ENST00000309641 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
PDE4D-201ENST00000309641 MADDQ8WXG6 1647 aa13.8□□□□□ -0.2
PDE4D-201ENST00000309641 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
PDE4D-201ENST00000309641 ANKRD50Q9ULJ7 1429 aa13.77□□□□□ -0.21
PDE4D-201ENST00000309641 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
PDE4D-201ENST00000309641 NAIPQ13075 1403 aa13.75□□□□□ -0.21
PDE4D-201ENST00000309641 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
PDE4D-201ENST00000309641 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
PDE4D-201ENST00000309641 FER1L4A9Z1Z3 1794 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms