RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 KIF7Q2M1P5 1343 aa22.79■■□□□ 1.24
SSH3-201ENST00000308127 EPRSP07814 1512 aaKnown RBP22.78■■□□□ 1.24
SSH3-201ENST00000308127 ZNF777Q9ULD5 760 aaPredicted RBP22.78■■□□□ 1.24
SSH3-201ENST00000308127 PPP4R2Q9NY27 417 aa22.76■■□□□ 1.23
SSH3-201ENST00000308127 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
SSH3-201ENST00000308127 ARHGEF11O15085 1522 aa22.75■■□□□ 1.23
SSH3-201ENST00000308127 NCOA1Q15788 1441 aa22.73■■□□□ 1.23
SSH3-201ENST00000308127 TCOF1Q13428 1488 aaKnown RBP22.71■■□□□ 1.23
SSH3-201ENST00000308127 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
SSH3-201ENST00000308127 ANKRD30BQ9BXX2 1392 aa22.71■■□□□ 1.23
SSH3-201ENST00000308127 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
SSH3-201ENST00000308127 GCC2Q8IWJ2 1684 aa22.69■■□□□ 1.22
SSH3-201ENST00000308127 AKNAQ7Z591 1439 aa22.67■■□□□ 1.22
SSH3-201ENST00000308127 ZBED9Q6R2W3 1325 aa22.67■■□□□ 1.22
SSH3-201ENST00000308127 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
SSH3-201ENST00000308127 DAPK1P53355 1430 aa22.66■■□□□ 1.22
SSH3-201ENST00000308127 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
SSH3-201ENST00000308127 ABCC5O15440 1437 aa22.65■■□□□ 1.22
SSH3-201ENST00000308127 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
SSH3-201ENST00000308127 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
SSH3-201ENST00000308127 TEX14Q8IWB6 1497 aa22.62■■□□□ 1.21
SSH3-201ENST00000308127 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
SSH3-201ENST00000308127 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
SSH3-201ENST00000308127 KDM2AQ9Y2K7 1162 aa22.6■■□□□ 1.21
SSH3-201ENST00000308127 PKD2Q13563 968 aa22.59■■□□□ 1.21
SSH3-201ENST00000308127 WDR62O43379 1518 aa22.59■■□□□ 1.21
SSH3-201ENST00000308127 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
SSH3-201ENST00000308127 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
SSH3-201ENST00000308127 FBLN2P98095 1184 aa22.57■■□□□ 1.2
SSH3-201ENST00000308127 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
SSH3-201ENST00000308127 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
SSH3-201ENST00000308127 NBR1Q14596 966 aa22.56■■□□□ 1.2
SSH3-201ENST00000308127 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
SSH3-201ENST00000308127 USP47Q96K76 1375 aa22.54■■□□□ 1.2
SSH3-201ENST00000308127 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
SSH3-201ENST00000308127 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.19
SSH3-201ENST00000308127 DHX29Q7Z478 1369 aaKnown RBP22.51■■□□□ 1.19
SSH3-201ENST00000308127 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
SSH3-201ENST00000308127 NUP153P49790 1475 aaKnown RBP22.5■■□□□ 1.19
SSH3-201ENST00000308127 ERICH6BQ5W0A0 696 aa22.5■■□□□ 1.19
SSH3-201ENST00000308127 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
SSH3-201ENST00000308127 PZPP20742 1482 aa22.49■■□□□ 1.19
SSH3-201ENST00000308127 ROCK1Q13464 1354 aa22.48■■□□□ 1.19
SSH3-201ENST00000308127 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
SSH3-201ENST00000308127 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
SSH3-201ENST00000308127 CARD11Q9BXL7 1154 aa22.47■■□□□ 1.19
SSH3-201ENST00000308127 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
SSH3-201ENST00000308127 DNMT1P26358 1616 aaKnown RBP22.45■■□□□ 1.18
SSH3-201ENST00000308127 DISP1Q96F81 1524 aa22.44■■□□□ 1.18
SSH3-201ENST00000308127 ST20-MTHFSA0A0A6YYL1 179 aa22.43■■□□□ 1.18
SSH3-201ENST00000308127 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
SSH3-201ENST00000308127 CAMSAP2Q08AD1 1489 aa22.42■■□□□ 1.18
SSH3-201ENST00000308127 PNISRQ8TF01 805 aaKnown RBP22.41■■□□□ 1.18
SSH3-201ENST00000308127 DCAF11Q8TEB1 546 aa22.4■■□□□ 1.18
SSH3-201ENST00000308127 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
SSH3-201ENST00000308127 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
SSH3-201ENST00000308127 NUP155O75694 1391 aa22.39■■□□□ 1.18
SSH3-201ENST00000308127 KIAA1107Q9UPP5 1409 aa22.38■■□□□ 1.17
SSH3-201ENST00000308127 NPM2Q86SE8 214 aaKnown RBP22.38■■□□□ 1.17
SSH3-201ENST00000308127 DEKP35659 375 aaKnown RBP22.37■■□□□ 1.17
SSH3-201ENST00000308127 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
SSH3-201ENST00000308127 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
SSH3-201ENST00000308127 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
SSH3-201ENST00000308127 KIF14Q15058 1648 aa22.35■■□□□ 1.17
SSH3-201ENST00000308127 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
SSH3-201ENST00000308127 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.17
SSH3-201ENST00000308127 RAPGEF6Q8TEU7 1601 aa22.33■■□□□ 1.17
SSH3-201ENST00000308127 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.16
SSH3-201ENST00000308127 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
SSH3-201ENST00000308127 KIAA0586Q9BVV6 1533 aa22.32■■□□□ 1.16
SSH3-201ENST00000308127 EXOC6Q8TAG9 804 aa22.32■■□□□ 1.16
SSH3-201ENST00000308127 SKAP1Q86WV1 359 aa22.32■■□□□ 1.16
SSH3-201ENST00000308127 MBD5Q9P267 1494 aa22.31■■□□□ 1.16
SSH3-201ENST00000308127 ANKRD30AQ9BXX3 1397 aa22.3■■□□□ 1.16
SSH3-201ENST00000308127 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
SSH3-201ENST00000308127 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
SSH3-201ENST00000308127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
SSH3-201ENST00000308127 ANP32AP39687 249 aaKnown RBP22.27■■□□□ 1.16
SSH3-201ENST00000308127 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
SSH3-201ENST00000308127 KDM5CP41229 1560 aa22.26■■□□□ 1.15
SSH3-201ENST00000308127 PLIN1O60240 522 aa22.26■■□□□ 1.15
SSH3-201ENST00000308127 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
SSH3-201ENST00000308127 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
SSH3-201ENST00000308127 POLR1AO95602 1720 aaPredicted RBP22.25■■□□□ 1.15
SSH3-201ENST00000308127 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
SSH3-201ENST00000308127 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
SSH3-201ENST00000308127 TSPY4P0CV99 314 aa22.24■■□□□ 1.15
SSH3-201ENST00000308127 TSPY10P0CW01 314 aa22.24■■□□□ 1.15
SSH3-201ENST00000308127 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
SSH3-201ENST00000308127 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
SSH3-201ENST00000308127 KIF15Q9NS87 1388 aa22.22■■□□□ 1.15
SSH3-201ENST00000308127 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
SSH3-201ENST00000308127 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
SSH3-201ENST00000308127 IPO9Q96P70 1041 aaKnown RBP22.21■■□□□ 1.15
SSH3-201ENST00000308127 C9orf84Q5VXU9 1444 aa22.2■■□□□ 1.14
SSH3-201ENST00000308127 ZBTB47Q9UFB7 747 aaPredicted RBP22.2■■□□□ 1.14
SSH3-201ENST00000308127 RCAN3Q9UKA8 241 aa22.19■■□□□ 1.14
SSH3-201ENST00000308127 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
SSH3-201ENST00000308127 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
SSH3-201ENST00000308127 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms