RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
CDC40-201ENST00000307731 SPAG9O60271 1321 aaKnown RBP10.75□□□□□ -0.69
CDC40-201ENST00000307731 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
CDC40-201ENST00000307731 MIA2Q96PC5 1412 aa10.74□□□□□ -0.69
CDC40-201ENST00000307731 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
CDC40-201ENST00000307731 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
CDC40-201ENST00000307731 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
CDC40-201ENST00000307731 UHRF1BP1LA0JNW5 1464 aa10.72□□□□□ -0.69
CDC40-201ENST00000307731 HRCP23327 699 aa10.72□□□□□ -0.69
CDC40-201ENST00000307731 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
CDC40-201ENST00000307731 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
CDC40-201ENST00000307731 ARID4BQ4LE39 1312 aaPredicted RBP10.71□□□□□ -0.69
CDC40-201ENST00000307731 KDM5BQ9UGL1 1544 aa10.7□□□□□ -0.7
CDC40-201ENST00000307731 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 PLEKHH2Q8IVE3 1493 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 RIMBP3CA6NJZ7 1639 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 RIMBP3BA6NNM3 1639 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 PTPN23Q9H3S7 1636 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 RIMBP3Q9UFD9 1639 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
CDC40-201ENST00000307731 MAGI3Q5TCQ9 1506 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 GPATCH8Q9UKJ3 1502 aaKnown RBP10.69□□□□□ -0.7
CDC40-201ENST00000307731 AFAP1Q8N556 730 aa10.69□□□□□ -0.7
CDC40-201ENST00000307731 ZCCHC11Q5TAX3 1644 aaKnown RBP10.68□□□□□ -0.7
CDC40-201ENST00000307731 CAMSAP2Q08AD1 1489 aa10.68□□□□□ -0.7
CDC40-201ENST00000307731 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
CDC40-201ENST00000307731 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
CDC40-201ENST00000307731 GGT6Q6P531 493 aa10.66□□□□□ -0.7
CDC40-201ENST00000307731 FANCAO15360 1455 aa10.66□□□□□ -0.7
CDC40-201ENST00000307731 MLECQ14165 292 aa10.66□□□□□ -0.7
CDC40-201ENST00000307731 KIF3BO15066 747 aa10.65□□□□□ -0.7
CDC40-201ENST00000307731 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
CDC40-201ENST00000307731 ADCY10Q96PN6 1610 aa10.65□□□□□ -0.7
CDC40-201ENST00000307731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDC40-201ENST00000307731 PLCH2O75038 1416 aa10.65□□□□□ -0.7
CDC40-201ENST00000307731 DAPK1P53355 1430 aa10.65□□□□□ -0.7
CDC40-201ENST00000307731 ADGRL1O94910 1474 aa10.65□□□□□ -0.71
CDC40-201ENST00000307731 KIF15Q9NS87 1388 aa10.65□□□□□ -0.71
CDC40-201ENST00000307731 ZNF326Q5BKZ1 582 aaKnown RBP10.64□□□□□ -0.71
CDC40-201ENST00000307731 C9orf84Q5VXU9 1444 aa10.64□□□□□ -0.71
CDC40-201ENST00000307731 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
CDC40-201ENST00000307731 KANK1Q14678 1352 aa10.64□□□□□ -0.71
CDC40-201ENST00000307731 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
CDC40-201ENST00000307731 NUP155O75694 1391 aa10.63□□□□□ -0.71
CDC40-201ENST00000307731 TONSLQ96HA7 1378 aa10.63□□□□□ -0.71
CDC40-201ENST00000307731 CCDC141Q6ZP82 1450 aa10.63□□□□□ -0.71
CDC40-201ENST00000307731 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
CDC40-201ENST00000307731 AKNAQ7Z591 1439 aa10.61□□□□□ -0.71
CDC40-201ENST00000307731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDC40-201ENST00000307731 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
CDC40-201ENST00000307731 ABCC5O15440 1437 aa10.6□□□□□ -0.71
CDC40-201ENST00000307731 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
CDC40-201ENST00000307731 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
CDC40-201ENST00000307731 PKD2Q13563 968 aa10.59□□□□□ -0.71
CDC40-201ENST00000307731 MYO5CQ9NQX4 1742 aa10.59□□□□□ -0.71
CDC40-201ENST00000307731 ABCC10Q5T3U5 1492 aa10.59□□□□□ -0.71
CDC40-201ENST00000307731 TEX14Q8IWB6 1497 aa10.59□□□□□ -0.71
CDC40-201ENST00000307731 MPHOSPH9Q99550 1183 aa10.58□□□□□ -0.72
CDC40-201ENST00000307731 TTC37Q6PGP7 1564 aa10.58□□□□□ -0.72
CDC40-201ENST00000307731 DENND4BO75064 1496 aaPredicted RBP10.58□□□□□ -0.72
CDC40-201ENST00000307731 FOXD1Q16676 465 aa10.58□□□□□ -0.72
CDC40-201ENST00000307731 HFM1A2PYH4 1435 aa10.57□□□□□ -0.72
CDC40-201ENST00000307731 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
CDC40-201ENST00000307731 SIN3AQ96ST3 1273 aa10.57□□□□□ -0.72
CDC40-201ENST00000307731 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
CDC40-201ENST00000307731 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
CDC40-201ENST00000307731 ROCK1Q13464 1354 aa10.55□□□□□ -0.72
CDC40-201ENST00000307731 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
CDC40-201ENST00000307731 NAIPQ13075 1403 aa10.55□□□□□ -0.72
CDC40-201ENST00000307731 KIAA1107Q9UPP5 1409 aa10.55□□□□□ -0.72
CDC40-201ENST00000307731 RGL3Q3MIN7 710 aa10.54□□□□□ -0.72
CDC40-201ENST00000307731 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
CDC40-201ENST00000307731 TSPOAP1O95153 1857 aa10.54□□□□□ -0.72
CDC40-201ENST00000307731 DHX57Q6P158 1386 aaKnown RBP10.54□□□□□ -0.72
CDC40-201ENST00000307731 BCANQ96GW7 911 aa10.54□□□□□ -0.72
CDC40-201ENST00000307731 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
CDC40-201ENST00000307731 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 PREX2Q70Z35 1606 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 NCOA1Q15788 1441 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 POLR3GLQ9BT43 218 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 CDC42BPAQ5VT25 1732 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 ZNF518AQ6AHZ1 1483 aa10.53□□□□□ -0.72
CDC40-201ENST00000307731 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
CDC40-201ENST00000307731 MAPKBP1O60336 1514 aa10.51□□□□□ -0.73
CDC40-201ENST00000307731 NEO1Q92859 1461 aa10.5□□□□□ -0.73
CDC40-201ENST00000307731 SAMD9LQ8IVG5 1584 aa10.5□□□□□ -0.73
CDC40-201ENST00000307731 CFAP74Q9C0B2 1584 aa10.5□□□□□ -0.73
CDC40-201ENST00000307731 ABCA9Q8IUA7 1624 aa10.49□□□□□ -0.73
CDC40-201ENST00000307731 SHANK2Q9UPX8 1470 aa10.48□□□□□ -0.73
CDC40-201ENST00000307731 CDC42BPBQ9Y5S2 1711 aa10.47□□□□□ -0.73
CDC40-201ENST00000307731 ABCC1P33527 1531 aa10.47□□□□□ -0.73
CDC40-201ENST00000307731 PPP1R15AO75807 674 aaPredicted RBP10.46□□□□□ -0.73
CDC40-201ENST00000307731 ARHGEF5Q12774 1597 aa10.46□□□□□ -0.74
CDC40-201ENST00000307731 POGZQ7Z3K3 1410 aa10.46□□□□□ -0.74
CDC40-201ENST00000307731 MBD5Q9P267 1494 aa10.46□□□□□ -0.74
CDC40-201ENST00000307731 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
CDC40-201ENST00000307731 DHX29Q7Z478 1369 aaKnown RBP10.45□□□□□ -0.74
CDC40-201ENST00000307731 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
CDC40-201ENST00000307731 DUOX2Q9NRD8 1548 aa10.45□□□□□ -0.74
CDC40-201ENST00000307731 A2MP01023 1474 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms