RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
ZNF556-201ENST00000307635 UACAQ9BZF9 1416 aa13.94□□□□□ -0.18
ZNF556-201ENST00000307635 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
ZNF556-201ENST00000307635 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
ZNF556-201ENST00000307635 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
ZNF556-201ENST00000307635 PKD2Q13563 968 aa13.93□□□□□ -0.18
ZNF556-201ENST00000307635 NGDNQ8NEJ9 315 aaKnown RBP13.92□□□□□ -0.18
ZNF556-201ENST00000307635 SOX12O15370 315 aa13.91□□□□□ -0.18
ZNF556-201ENST00000307635 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
ZNF556-201ENST00000307635 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
ZNF556-201ENST00000307635 ATF3P18847 181 aa13.88□□□□□ -0.19
ZNF556-201ENST00000307635 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
ZNF556-201ENST00000307635 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
ZNF556-201ENST00000307635 EVA1CP58658 441 aa13.87□□□□□ -0.19
ZNF556-201ENST00000307635 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
ZNF556-201ENST00000307635 SALL2Q9Y467 1007 aaPredicted RBP13.86□□□□□ -0.19
ZNF556-201ENST00000307635 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
ZNF556-201ENST00000307635 RTF1Q92541 710 aaKnown RBP13.85□□□□□ -0.19
ZNF556-201ENST00000307635 IGF1RP08069 1367 aa13.85□□□□□ -0.19
ZNF556-201ENST00000307635 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
ZNF556-201ENST00000307635 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
ZNF556-201ENST00000307635 SETD5Q9C0A6 1442 aa13.83□□□□□ -0.2
ZNF556-201ENST00000307635 U2SURPO15042 1029 aaKnown RBP13.83□□□□□ -0.2
ZNF556-201ENST00000307635 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
ZNF556-201ENST00000307635 LAS1LQ9Y4W2 734 aaKnown RBP13.82□□□□□ -0.2
ZNF556-201ENST00000307635 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
ZNF556-201ENST00000307635 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
ZNF556-201ENST00000307635 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
ZNF556-201ENST00000307635 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
ZNF556-201ENST00000307635 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
ZNF556-201ENST00000307635 UPF2Q9HAU5 1272 aaKnown RBP13.79□□□□□ -0.2
ZNF556-201ENST00000307635 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
ZNF556-201ENST00000307635 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
ZNF556-201ENST00000307635 PLEKHH2Q8IVE3 1493 aa13.79□□□□□ -0.2
ZNF556-201ENST00000307635 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
ZNF556-201ENST00000307635 CUX1P39880 1505 aa13.77□□□□□ -0.2
ZNF556-201ENST00000307635 THEMISQ8N1K5 641 aaPredicted RBP13.76□□□□□ -0.21
ZNF556-201ENST00000307635 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
ZNF556-201ENST00000307635 MPHOSPH9Q99550 1183 aa13.76□□□□□ -0.21
ZNF556-201ENST00000307635 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
ZNF556-201ENST00000307635 AMPHP49418 695 aa13.74□□□□□ -0.21
ZNF556-201ENST00000307635 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
ZNF556-201ENST00000307635 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
ZNF556-201ENST00000307635 PSME1Q06323 249 aa13.73□□□□□ -0.21
ZNF556-201ENST00000307635 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
ZNF556-201ENST00000307635 HSP90AA1P07900 732 aaKnown RBP13.72□□□□□ -0.21
ZNF556-201ENST00000307635 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
ZNF556-201ENST00000307635 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
ZNF556-201ENST00000307635 CC2D1BQ5T0F9 858 aaKnown RBP13.71□□□□□ -0.21
ZNF556-201ENST00000307635 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
ZNF556-201ENST00000307635 G3V3G9 751 aa13.71□□□□□ -0.22
ZNF556-201ENST00000307635 MSH5O43196 834 aa13.71□□□□□ -0.22
ZNF556-201ENST00000307635 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.22
ZNF556-201ENST00000307635 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.22
ZNF556-201ENST00000307635 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
ZNF556-201ENST00000307635 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
ZNF556-201ENST00000307635 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
ZNF556-201ENST00000307635 OS9Q13438 667 aaPredicted RBP13.7□□□□□ -0.22
ZNF556-201ENST00000307635 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
ZNF556-201ENST00000307635 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
ZNF556-201ENST00000307635 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
ZNF556-201ENST00000307635 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
ZNF556-201ENST00000307635 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
ZNF556-201ENST00000307635 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
ZNF556-201ENST00000307635 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
ZNF556-201ENST00000307635 MS4A1P11836 297 aa13.68□□□□□ -0.22
ZNF556-201ENST00000307635 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
ZNF556-201ENST00000307635 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
ZNF556-201ENST00000307635 NEUROD2Q15784 382 aa13.67□□□□□ -0.22
ZNF556-201ENST00000307635 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
ZNF556-201ENST00000307635 CUL7Q14999 1698 aa13.66□□□□□ -0.22
ZNF556-201ENST00000307635 EVC2Q86UK5 1308 aa13.66□□□□□ -0.22
ZNF556-201ENST00000307635 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
ZNF556-201ENST00000307635 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
ZNF556-201ENST00000307635 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
ZNF556-201ENST00000307635 TEX14Q8IWB6 1497 aa13.65□□□□□ -0.22
ZNF556-201ENST00000307635 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
ZNF556-201ENST00000307635 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
ZNF556-201ENST00000307635 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
ZNF556-201ENST00000307635 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
ZNF556-201ENST00000307635 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
ZNF556-201ENST00000307635 KIF21BO75037 1637 aa13.63□□□□□ -0.23
ZNF556-201ENST00000307635 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
ZNF556-201ENST00000307635 C1orf141Q5JVX7 400 aa13.63□□□□□ -0.23
ZNF556-201ENST00000307635 COG3Q96JB2 828 aa13.63□□□□□ -0.23
ZNF556-201ENST00000307635 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
ZNF556-201ENST00000307635 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
ZNF556-201ENST00000307635 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
ZNF556-201ENST00000307635 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
ZNF556-201ENST00000307635 GPRASP1Q5JY77 1395 aa13.62□□□□□ -0.23
ZNF556-201ENST00000307635 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
ZNF556-201ENST00000307635 LTV1Q96GA3 475 aaPredicted RBP13.62□□□□□ -0.23
ZNF556-201ENST00000307635 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
ZNF556-201ENST00000307635 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
ZNF556-201ENST00000307635 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
ZNF556-201ENST00000307635 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
ZNF556-201ENST00000307635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZNF556-201ENST00000307635 KTN1Q86UP2 1357 aaKnown RBP13.6□□□□□ -0.23
ZNF556-201ENST00000307635 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
ZNF556-201ENST00000307635 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms