RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
CCDC8-201ENST00000307522 RTL5Q5HYW3 569 aaPredicted RBP22.31■■□□□ 1.16
CCDC8-201ENST00000307522 DISP1Q96F81 1524 aa22.3■■□□□ 1.16
CCDC8-201ENST00000307522 MAP3K1Q13233 1512 aa22.3■■□□□ 1.16
CCDC8-201ENST00000307522 MAPKBP1O60336 1514 aa22.29■■□□□ 1.16
CCDC8-201ENST00000307522 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
CCDC8-201ENST00000307522 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
CCDC8-201ENST00000307522 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
CCDC8-201ENST00000307522 EIF5BO60841 1220 aaKnown RBP22.25■■□□□ 1.15
CCDC8-201ENST00000307522 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
CCDC8-201ENST00000307522 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
CCDC8-201ENST00000307522 CCER2I3L3R5 266 aa22.23■■□□□ 1.15
CCDC8-201ENST00000307522 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
CCDC8-201ENST00000307522 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
CCDC8-201ENST00000307522 PLEKHD1A6NEE1 506 aa22.23■■□□□ 1.15
CCDC8-201ENST00000307522 PPP4R2Q9NY27 417 aa22.22■■□□□ 1.15
CCDC8-201ENST00000307522 NUP153P49790 1475 aaKnown RBP22.22■■□□□ 1.15
CCDC8-201ENST00000307522 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
CCDC8-201ENST00000307522 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
CCDC8-201ENST00000307522 HNRNPMP52272 730 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC8-201ENST00000307522 FAM9BQ8IZU0 186 aa22.21■■□□□ 1.15
CCDC8-201ENST00000307522 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
CCDC8-201ENST00000307522 NAIPQ13075 1403 aa22.19■■□□□ 1.14
CCDC8-201ENST00000307522 SLC4A1APQ9BWU0 796 aaKnown RBP22.16■■□□□ 1.14
CCDC8-201ENST00000307522 MPHOSPH9Q99550 1183 aa22.15■■□□□ 1.14
CCDC8-201ENST00000307522 POLR3GLQ9BT43 218 aa22.15■■□□□ 1.14
CCDC8-201ENST00000307522 KIAA0556O60303 1618 aa22.15■■□□□ 1.14
CCDC8-201ENST00000307522 EHBP1L1Q8N3D4 1523 aa22.14■■□□□ 1.13
CCDC8-201ENST00000307522 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.13
CCDC8-201ENST00000307522 HECW1Q76N89 1606 aa22.14■■□□□ 1.13
CCDC8-201ENST00000307522 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
CCDC8-201ENST00000307522 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
CCDC8-201ENST00000307522 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
CCDC8-201ENST00000307522 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
CCDC8-201ENST00000307522 ZBTB47Q9UFB7 747 aaPredicted RBP22.12■■□□□ 1.13
CCDC8-201ENST00000307522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.13
CCDC8-201ENST00000307522 PTPRGP23470 1445 aa22.1■■□□□ 1.13
CCDC8-201ENST00000307522 KDM6BO15054 1643 aa22.09■■□□□ 1.13
CCDC8-201ENST00000307522 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
CCDC8-201ENST00000307522 HFM1A2PYH4 1435 aa22.08■■□□□ 1.13
CCDC8-201ENST00000307522 BRPF3Q9ULD4 1205 aa22.05■■□□□ 1.12
CCDC8-201ENST00000307522 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
CCDC8-201ENST00000307522 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
CCDC8-201ENST00000307522 IPO9Q96P70 1041 aaKnown RBP22.04■■□□□ 1.12
CCDC8-201ENST00000307522 KDM2AQ9Y2K7 1162 aa22.02■■□□□ 1.12
CCDC8-201ENST00000307522 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.12
CCDC8-201ENST00000307522 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
CCDC8-201ENST00000307522 NEFMP07197 916 aa22.02■■□□□ 1.12
CCDC8-201ENST00000307522 ABCC5O15440 1437 aa22.01■■□□□ 1.11
CCDC8-201ENST00000307522 NUP160Q12769 1436 aa22.01■■□□□ 1.11
CCDC8-201ENST00000307522 UACAQ9BZF9 1416 aa22.01■■□□□ 1.11
CCDC8-201ENST00000307522 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
CCDC8-201ENST00000307522 KIF14Q15058 1648 aa22■■□□□ 1.11
CCDC8-201ENST00000307522 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
CCDC8-201ENST00000307522 DAPK1P53355 1430 aa21.98■■□□□ 1.11
CCDC8-201ENST00000307522 ATP10BO94823 1461 aa21.98■■□□□ 1.11
CCDC8-201ENST00000307522 PKD2Q13563 968 aa21.97■■□□□ 1.11
CCDC8-201ENST00000307522 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
CCDC8-201ENST00000307522 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
CCDC8-201ENST00000307522 UBE2Q2Q8WVN8 375 aa21.97■■□□□ 1.11
CCDC8-201ENST00000307522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCDC8-201ENST00000307522 TIMELESSQ9UNS1 1208 aa21.95■■□□□ 1.1
CCDC8-201ENST00000307522 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
CCDC8-201ENST00000307522 RGL3Q3MIN7 710 aa21.93■■□□□ 1.1
CCDC8-201ENST00000307522 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
CCDC8-201ENST00000307522 HSPA5P11021 654 aaKnown RBP21.91■■□□□ 1.1
CCDC8-201ENST00000307522 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
CCDC8-201ENST00000307522 AKNAQ7Z591 1439 aa21.89■■□□□ 1.1
CCDC8-201ENST00000307522 CAMSAP2Q08AD1 1489 aa21.89■■□□□ 1.1
CCDC8-201ENST00000307522 MIA2Q96PC5 1412 aa21.88■■□□□ 1.09
CCDC8-201ENST00000307522 DENND4BO75064 1496 aaPredicted RBP21.88■■□□□ 1.09
CCDC8-201ENST00000307522 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
CCDC8-201ENST00000307522 NUP155O75694 1391 aa21.86■■□□□ 1.09
CCDC8-201ENST00000307522 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
CCDC8-201ENST00000307522 CHD1O14646 1710 aa21.84■■□□□ 1.09
CCDC8-201ENST00000307522 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.09
CCDC8-201ENST00000307522 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
CCDC8-201ENST00000307522 TCOF1Q13428 1488 aaKnown RBP21.83■■□□□ 1.09
CCDC8-201ENST00000307522 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
CCDC8-201ENST00000307522 AFAP1Q8N556 730 aa21.8■■□□□ 1.08
CCDC8-201ENST00000307522 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
CCDC8-201ENST00000307522 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
CCDC8-201ENST00000307522 EIF4G2P78344 907 aaKnown RBP eCLIP21.76■■□□□ 1.07
CCDC8-201ENST00000307522 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
CCDC8-201ENST00000307522 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
CCDC8-201ENST00000307522 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
CCDC8-201ENST00000307522 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
CCDC8-201ENST00000307522 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
CCDC8-201ENST00000307522 ABCA8O94911 1581 aa21.71■■□□□ 1.07
CCDC8-201ENST00000307522 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
CCDC8-201ENST00000307522 ZBED9Q6R2W3 1325 aa21.67■■□□□ 1.06
CCDC8-201ENST00000307522 ARHGAP5Q13017 1502 aa21.67■■□□□ 1.06
CCDC8-201ENST00000307522 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
CCDC8-201ENST00000307522 FRAT1Q92837 279 aaPredicted RBP21.65■■□□□ 1.06
CCDC8-201ENST00000307522 ROCK1Q13464 1354 aa21.64■■□□□ 1.06
CCDC8-201ENST00000307522 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.06
CCDC8-201ENST00000307522 PZPP20742 1482 aa21.63■■□□□ 1.05
CCDC8-201ENST00000307522 PKNOX2Q96KN3 472 aa21.61■■□□□ 1.05
CCDC8-201ENST00000307522 PDE4AP27815 886 aa21.61■■□□□ 1.05
CCDC8-201ENST00000307522 ARXQ96QS3 562 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms