RNA–Protein interactions for RNA: ENST00000306773.4

NPTX1-201, Transcript of neuronal pentraxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX1, Length 5,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-201ENST00000306773 FOXD1Q16676 465 aa24.67■■□□□ 1.54
NPTX1-201ENST00000306773 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
NPTX1-201ENST00000306773 SPAG9O60271 1321 aaKnown RBP24.65■■□□□ 1.54
NPTX1-201ENST00000306773 ROCK2O75116 1388 aaKnown RBP24.63■■□□□ 1.53
NPTX1-201ENST00000306773 KIF3BO15066 747 aa24.62■■□□□ 1.53
NPTX1-201ENST00000306773 HNRNPMP52272 730 aaKnown RBP eCLIP24.62■■□□□ 1.53
NPTX1-201ENST00000306773 KTN1Q86UP2 1357 aaKnown RBP24.62■■□□□ 1.53
NPTX1-201ENST00000306773 CASC1Q6TDU7 716 aa24.61■■□□□ 1.53
NPTX1-201ENST00000306773 HDGFL2Q7Z4V5 671 aaPredicted RBP24.61■■□□□ 1.53
NPTX1-201ENST00000306773 B4GALNT3Q6L9W6 998 aa24.6■■□□□ 1.53
NPTX1-201ENST00000306773 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
NPTX1-201ENST00000306773 EIF3AQ14152 1382 aaKnown RBP24.58■■□□□ 1.53
NPTX1-201ENST00000306773 GLIPR1L2Q4G1C9 344 aa24.58■■□□□ 1.53
NPTX1-201ENST00000306773 RUSC2Q8N2Y8 1516 aa24.57■■□□□ 1.52
NPTX1-201ENST00000306773 FRAT1Q92837 279 aaPredicted RBP24.57■■□□□ 1.52
NPTX1-201ENST00000306773 SAFB2Q14151 953 aaKnown RBP eCLIP24.56■■□□□ 1.52
NPTX1-201ENST00000306773 PTPRGP23470 1445 aa24.56■■□□□ 1.52
NPTX1-201ENST00000306773 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
NPTX1-201ENST00000306773 RALBP1Q15311 655 aa24.55■■□□□ 1.52
NPTX1-201ENST00000306773 STK26Q9P289 416 aa24.55■■□□□ 1.52
NPTX1-201ENST00000306773 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
NPTX1-201ENST00000306773 IGF1RP08069 1367 aa24.51■■□□□ 1.51
NPTX1-201ENST00000306773 L3MBTL2Q969R5 705 aa24.5■■□□□ 1.51
NPTX1-201ENST00000306773 NOP58Q9Y2X3 529 aaKnown RBP24.5■■□□□ 1.51
NPTX1-201ENST00000306773 GOLGA6L22H0YM25 854 aa24.49■■□□□ 1.51
NPTX1-201ENST00000306773 NCLP19338 710 aaKnown RBP24.49■■□□□ 1.51
NPTX1-201ENST00000306773 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
NPTX1-201ENST00000306773 RGS3P49796 1198 aa24.46■■□□□ 1.51
NPTX1-201ENST00000306773 RBM19Q9Y4C8 960 aaKnown RBP24.45■■□□□ 1.5
NPTX1-201ENST00000306773 RTF1Q92541 710 aaKnown RBP24.41■■□□□ 1.5
NPTX1-201ENST00000306773 SOX12O15370 315 aa24.41■■□□□ 1.5
NPTX1-201ENST00000306773 CALD1Q05682 793 aaKnown RBP24.41■■□□□ 1.5
NPTX1-201ENST00000306773 TRIM44Q96DX7 344 aaPredicted RBP24.4■■□□□ 1.5
NPTX1-201ENST00000306773 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.49
NPTX1-201ENST00000306773 EID1Q9Y6B2 187 aa24.39■■□□□ 1.49
NPTX1-201ENST00000306773 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
NPTX1-201ENST00000306773 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
NPTX1-201ENST00000306773 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
NPTX1-201ENST00000306773 OS9Q13438 667 aaPredicted RBP24.37■■□□□ 1.49
NPTX1-201ENST00000306773 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
NPTX1-201ENST00000306773 U2AF1L5P0DN76 240 aaPredicted RBP24.35■■□□□ 1.49
NPTX1-201ENST00000306773 U2AF1Q01081 240 aaKnown RBP eCLIP24.35■■□□□ 1.49
NPTX1-201ENST00000306773 IPO8O15397 1037 aaKnown RBP24.34■■□□□ 1.49
NPTX1-201ENST00000306773 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
NPTX1-201ENST00000306773 ERICH6BQ5W0A0 696 aa24.33■■□□□ 1.49
NPTX1-201ENST00000306773 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
NPTX1-201ENST00000306773 MYOM3Q5VTT5 1437 aa24.3■■□□□ 1.48
NPTX1-201ENST00000306773 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
NPTX1-201ENST00000306773 CFAP44Q96MT7 982 aa24.28■■□□□ 1.48
NPTX1-201ENST00000306773 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
NPTX1-201ENST00000306773 NPHP1O15259 732 aa24.27■■□□□ 1.48
NPTX1-201ENST00000306773 RTN4Q9NQC3 1192 aaKnown RBP24.26■■□□□ 1.47
NPTX1-201ENST00000306773 CUX1P39880 1505 aa24.25■■□□□ 1.47
NPTX1-201ENST00000306773 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
NPTX1-201ENST00000306773 CFTRP13569 1480 aa24.24■■□□□ 1.47
NPTX1-201ENST00000306773 TSHZ2Q9NRE2 1034 aa24.24■■□□□ 1.47
NPTX1-201ENST00000306773 RCAN3Q9UKA8 241 aa24.24■■□□□ 1.47
NPTX1-201ENST00000306773 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
NPTX1-201ENST00000306773 ZRSR1Q15695 479 aaKnown RBP24.21■■□□□ 1.47
NPTX1-201ENST00000306773 GRIN2BQ13224 1484 aa24.21■■□□□ 1.47
NPTX1-201ENST00000306773 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
NPTX1-201ENST00000306773 KIF15Q9NS87 1388 aa24.2■■□□□ 1.47
NPTX1-201ENST00000306773 PDE3BQ13370 1112 aa24.2■■□□□ 1.46
NPTX1-201ENST00000306773 FGD6Q6ZV73 1430 aa24.2■■□□□ 1.46
NPTX1-201ENST00000306773 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
NPTX1-201ENST00000306773 KCNJ4P48050 445 aa24.18■■□□□ 1.46
NPTX1-201ENST00000306773 ST20-MTHFSA0A0A6YYL1 179 aa24.18■■□□□ 1.46
NPTX1-201ENST00000306773 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
NPTX1-201ENST00000306773 TRAK1Q9UPV9 953 aa24.18■■□□□ 1.46
NPTX1-201ENST00000306773 CSB-PGBD3P0DP91 1061 aa24.18■■□□□ 1.46
NPTX1-201ENST00000306773 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
NPTX1-201ENST00000306773 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
NPTX1-201ENST00000306773 CDK11BP21127 795 aaKnown RBP24.17■■□□□ 1.46
NPTX1-201ENST00000306773 ERICH3Q5RHP9 1530 aa24.17■■□□□ 1.46
NPTX1-201ENST00000306773 KIF21BO75037 1637 aa24.16■■□□□ 1.46
NPTX1-201ENST00000306773 CASKIN1Q8WXD9 1431 aa24.16■■□□□ 1.46
NPTX1-201ENST00000306773 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
NPTX1-201ENST00000306773 GOLGA2Q08379 1002 aa24.15■■□□□ 1.46
NPTX1-201ENST00000306773 FGD1P98174 961 aa24.15■■□□□ 1.46
NPTX1-201ENST00000306773 LMOD3Q0VAK6 560 aa24.14■■□□□ 1.46
NPTX1-201ENST00000306773 RWDD1Q9H446 243 aaPredicted RBP24.13■■□□□ 1.45
NPTX1-201ENST00000306773 MCCP23508 829 aa24.13■■□□□ 1.45
NPTX1-201ENST00000306773 STAC3Q96MF2 364 aa24.13■■□□□ 1.45
NPTX1-201ENST00000306773 MYBBP1AQ9BQG0 1328 aaKnown RBP24.12■■□□□ 1.45
NPTX1-201ENST00000306773 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
NPTX1-201ENST00000306773 PTMAP06454 111 aaKnown RBP24.12■■□□□ 1.45
NPTX1-201ENST00000306773 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
NPTX1-201ENST00000306773 STK31Q9BXU1 1019 aa24.1■■□□□ 1.45
NPTX1-201ENST00000306773 FYCO1Q9BQS8 1478 aa24.1■■□□□ 1.45
NPTX1-201ENST00000306773 EVC2Q86UK5 1308 aa24.1■■□□□ 1.45
NPTX1-201ENST00000306773 HSCBQ8IWL3 235 aa24.09■■□□□ 1.45
NPTX1-201ENST00000306773 HDAC5Q9UQL6 1122 aa24.08■■□□□ 1.45
NPTX1-201ENST00000306773 USP47Q96K76 1375 aa24.08■■□□□ 1.45
NPTX1-201ENST00000306773 PANK3Q9H999 370 aa24.07■■□□□ 1.44
NPTX1-201ENST00000306773 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
NPTX1-201ENST00000306773 ITPRIPQ8IWB1 547 aa24.07■■□□□ 1.44
NPTX1-201ENST00000306773 AMPHP49418 695 aa24.06■■□□□ 1.44
NPTX1-201ENST00000306773 TPRNQ4KMQ1 711 aa24.05■■□□□ 1.44
NPTX1-201ENST00000306773 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
NPTX1-201ENST00000306773 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms