RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TEX14Q8IWB6 1497 aa11.06□□□□□ -0.64
NKRF-201ENST00000304449 ROCK1Q13464 1354 aa11.06□□□□□ -0.64
NKRF-201ENST00000304449 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
NKRF-201ENST00000304449 KIAA0556O60303 1618 aa11.05□□□□□ -0.64
NKRF-201ENST00000304449 SPATA31E1Q6ZUB1 1445 aa11.05□□□□□ -0.64
NKRF-201ENST00000304449 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
NKRF-201ENST00000304449 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
NKRF-201ENST00000304449 RPRD2Q5VT52 1461 aaKnown RBP11.04□□□□□ -0.64
NKRF-201ENST00000304449 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
NKRF-201ENST00000304449 DAPK1P53355 1430 aa11.04□□□□□ -0.64
NKRF-201ENST00000304449 ABCC5O15440 1437 aa11.03□□□□□ -0.64
NKRF-201ENST00000304449 NUP153P49790 1475 aaKnown RBP11.03□□□□□ -0.64
NKRF-201ENST00000304449 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
NKRF-201ENST00000304449 MRC2Q9UBG0 1479 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 MPHOSPH9Q99550 1183 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 RRP7BPQ9NSQ0 103 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 RAPGEF6Q8TEU7 1601 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 ADCY10Q96PN6 1610 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 MBD5Q9P267 1494 aa11.01□□□□□ -0.65
NKRF-201ENST00000304449 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
NKRF-201ENST00000304449 SALL2Q9Y467 1007 aaPredicted RBP11□□□□□ -0.65
NKRF-201ENST00000304449 KIAA0586Q9BVV6 1533 aa11□□□□□ -0.65
NKRF-201ENST00000304449 CROCC2H7BZ55 1655 aa11□□□□□ -0.65
NKRF-201ENST00000304449 HNRNPUQ00839 825 aaKnown RBP eCLIP10.99□□□□□ -0.65
NKRF-201ENST00000304449 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
NKRF-201ENST00000304449 PZPP20742 1482 aa10.99□□□□□ -0.65
NKRF-201ENST00000304449 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
NKRF-201ENST00000304449 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
NKRF-201ENST00000304449 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 IFT140Q96RY7 1462 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 NBPF8Q3BBV2 869 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
NKRF-201ENST00000304449 ADGRL2O95490 1459 aa10.96□□□□□ -0.65
NKRF-201ENST00000304449 FANCIQ9NVI1 1328 aa10.96□□□□□ -0.65
NKRF-201ENST00000304449 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
NKRF-201ENST00000304449 BCORL1Q5H9F3 1711 aa10.95□□□□□ -0.66
NKRF-201ENST00000304449 EIF4G3O43432 1585 aaKnown RBP10.95□□□□□ -0.66
NKRF-201ENST00000304449 GRIN2AQ12879 1464 aa10.94□□□□□ -0.66
NKRF-201ENST00000304449 EIF4G2P78344 907 aaKnown RBP eCLIP10.94□□□□□ -0.66
NKRF-201ENST00000304449 ITSN2Q9NZM3 1697 aa10.94□□□□□ -0.66
NKRF-201ENST00000304449 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
NKRF-201ENST00000304449 ZNF644Q9H582 1327 aaPredicted RBP10.93□□□□□ -0.66
NKRF-201ENST00000304449 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
NKRF-201ENST00000304449 CEP170Q5SW79 1584 aa10.93□□□□□ -0.66
NKRF-201ENST00000304449 KIF14Q15058 1648 aa10.93□□□□□ -0.66
NKRF-201ENST00000304449 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
NKRF-201ENST00000304449 FOXD1Q16676 465 aa10.92□□□□□ -0.66
NKRF-201ENST00000304449 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
NKRF-201ENST00000304449 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
NKRF-201ENST00000304449 KDM5CP41229 1560 aa10.92□□□□□ -0.66
NKRF-201ENST00000304449 DHX29Q7Z478 1369 aaKnown RBP10.91□□□□□ -0.66
NKRF-201ENST00000304449 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
NKRF-201ENST00000304449 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
NKRF-201ENST00000304449 TROQ12816 1431 aaPredicted RBP10.91□□□□□ -0.66
NKRF-201ENST00000304449 CDC42BPAQ5VT25 1732 aa10.91□□□□□ -0.66
NKRF-201ENST00000304449 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
NKRF-201ENST00000304449 ERICH6BQ5W0A0 696 aa10.9□□□□□ -0.67
NKRF-201ENST00000304449 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.67
NKRF-201ENST00000304449 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
NKRF-201ENST00000304449 KDM5DQ9BY66 1539 aa10.89□□□□□ -0.67
NKRF-201ENST00000304449 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
NKRF-201ENST00000304449 UHRF1BP1Q6BDS2 1440 aa10.89□□□□□ -0.67
NKRF-201ENST00000304449 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
NKRF-201ENST00000304449 ABCC10Q5T3U5 1492 aa10.87□□□□□ -0.67
NKRF-201ENST00000304449 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
NKRF-201ENST00000304449 KIAA1107Q9UPP5 1409 aa10.87□□□□□ -0.67
NKRF-201ENST00000304449 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
NKRF-201ENST00000304449 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
NKRF-201ENST00000304449 ABCA8O94911 1581 aa10.86□□□□□ -0.67
NKRF-201ENST00000304449 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
NKRF-201ENST00000304449 E9PCH4 1651 aa10.86□□□□□ -0.67
NKRF-201ENST00000304449 NUP160Q12769 1436 aa10.86□□□□□ -0.67
NKRF-201ENST00000304449 EIF5BO60841 1220 aaKnown RBP10.85□□□□□ -0.67
NKRF-201ENST00000304449 PTPRGP23470 1445 aa10.84□□□□□ -0.67
NKRF-201ENST00000304449 SYNJ2O15056 1496 aa10.84□□□□□ -0.67
NKRF-201ENST00000304449 NPM2Q86SE8 214 aaKnown RBP10.84□□□□□ -0.67
NKRF-201ENST00000304449 ARHGEF12Q9NZN5 1544 aa10.84□□□□□ -0.67
NKRF-201ENST00000304449 FAM9BQ8IZU0 186 aa10.83□□□□□ -0.67
NKRF-201ENST00000304449 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
NKRF-201ENST00000304449 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
NKRF-201ENST00000304449 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
NKRF-201ENST00000304449 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
NKRF-201ENST00000304449 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
NKRF-201ENST00000304449 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
NKRF-201ENST00000304449 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
NKRF-201ENST00000304449 ARHGEF5Q12774 1597 aa10.81□□□□□ -0.68
NKRF-201ENST00000304449 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
NKRF-201ENST00000304449 ZBTB47Q9UFB7 747 aaPredicted RBP10.8□□□□□ -0.68
NKRF-201ENST00000304449 USP47Q96K76 1375 aa10.79□□□□□ -0.68
NKRF-201ENST00000304449 LAS1LQ9Y4W2 734 aaKnown RBP10.79□□□□□ -0.68
NKRF-201ENST00000304449 ANKRD50Q9ULJ7 1429 aa10.79□□□□□ -0.68
NKRF-201ENST00000304449 ATP10BO94823 1461 aa10.79□□□□□ -0.68
NKRF-201ENST00000304449 MRS2Q9HD23 443 aa10.78□□□□□ -0.68
NKRF-201ENST00000304449 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.68
NKRF-201ENST00000304449 ANKRD30AQ9BXX3 1397 aa10.77□□□□□ -0.68
NKRF-201ENST00000304449 CDC42BPBQ9Y5S2 1711 aa10.77□□□□□ -0.69
NKRF-201ENST00000304449 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms