RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
GCN1-201ENST00000300648 RTN4Q9NQC3 1192 aaKnown RBP14.22□□□□□ -0.13
GCN1-201ENST00000300648 TMF1P82094 1093 aa14.22□□□□□ -0.13
GCN1-201ENST00000300648 KTN1Q86UP2 1357 aaKnown RBP14.21□□□□□ -0.13
GCN1-201ENST00000300648 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
GCN1-201ENST00000300648 RWDD1Q9H446 243 aaPredicted RBP14.19□□□□□ -0.14
GCN1-201ENST00000300648 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
GCN1-201ENST00000300648 FRAT1Q92837 279 aaPredicted RBP14.19□□□□□ -0.14
GCN1-201ENST00000300648 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
GCN1-201ENST00000300648 RBM19Q9Y4C8 960 aaKnown RBP14.19□□□□□ -0.14
GCN1-201ENST00000300648 EIF3AQ14152 1382 aaKnown RBP14.18□□□□□ -0.14
GCN1-201ENST00000300648 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
GCN1-201ENST00000300648 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
GCN1-201ENST00000300648 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
GCN1-201ENST00000300648 GPATCH3Q96I76 525 aa14.17□□□□□ -0.14
GCN1-201ENST00000300648 RALBP1Q15311 655 aa14.17□□□□□ -0.14
GCN1-201ENST00000300648 GPS2Q13227 327 aa14.17□□□□□ -0.14
GCN1-201ENST00000300648 ROCK2O75116 1388 aaKnown RBP14.17□□□□□ -0.14
GCN1-201ENST00000300648 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
GCN1-201ENST00000300648 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
GCN1-201ENST00000300648 SKOR2Q2VWA4 1001 aaPredicted RBP14.15□□□□□ -0.14
GCN1-201ENST00000300648 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
GCN1-201ENST00000300648 HSP90AA2PQ14568 343 aaPredicted RBP14.15□□□□□ -0.14
GCN1-201ENST00000300648 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
GCN1-201ENST00000300648 IPO9Q96P70 1041 aaKnown RBP14.15□□□□□ -0.14
GCN1-201ENST00000300648 NAP1L2Q9ULW6 460 aaPredicted RBP14.13□□□□□ -0.15
GCN1-201ENST00000300648 VPS8Q8N3P4 1428 aa14.13□□□□□ -0.15
GCN1-201ENST00000300648 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
GCN1-201ENST00000300648 B4GALNT3Q6L9W6 998 aa14.12□□□□□ -0.15
GCN1-201ENST00000300648 PDE3BQ13370 1112 aa14.12□□□□□ -0.15
GCN1-201ENST00000300648 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
GCN1-201ENST00000300648 POGKQ9P215 609 aa14.11□□□□□ -0.15
GCN1-201ENST00000300648 TPM3P06753 285 aa14.11□□□□□ -0.15
GCN1-201ENST00000300648 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
GCN1-201ENST00000300648 HMMRO75330 724 aa14.1□□□□□ -0.15
GCN1-201ENST00000300648 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
GCN1-201ENST00000300648 ST18O60284 1047 aa14.09□□□□□ -0.15
GCN1-201ENST00000300648 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
GCN1-201ENST00000300648 A0A0G2JS52 829 aa14.08□□□□□ -0.15
GCN1-201ENST00000300648 CARMIL1Q5VZK9 1371 aa14.08□□□□□ -0.15
GCN1-201ENST00000300648 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
GCN1-201ENST00000300648 RCAN3Q9UKA8 241 aa14.08□□□□□ -0.16
GCN1-201ENST00000300648 HIRIP3Q9BW71 556 aaPredicted RBP14.08□□□□□ -0.16
GCN1-201ENST00000300648 NPHP1O15259 732 aa14.07□□□□□ -0.16
GCN1-201ENST00000300648 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
GCN1-201ENST00000300648 KIF16BQ96L93 1317 aa14.07□□□□□ -0.16
GCN1-201ENST00000300648 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
GCN1-201ENST00000300648 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
GCN1-201ENST00000300648 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
GCN1-201ENST00000300648 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
GCN1-201ENST00000300648 CUX2O14529 1486 aa14.05□□□□□ -0.16
GCN1-201ENST00000300648 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
GCN1-201ENST00000300648 TPM1P09493 284 aa14.03□□□□□ -0.16
GCN1-201ENST00000300648 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
GCN1-201ENST00000300648 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
GCN1-201ENST00000300648 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
GCN1-201ENST00000300648 CLSTN1O94985 981 aa14.03□□□□□ -0.16
GCN1-201ENST00000300648 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
GCN1-201ENST00000300648 UACAQ9BZF9 1416 aa14.02□□□□□ -0.16
GCN1-201ENST00000300648 MORC1Q86VD1 984 aa14.02□□□□□ -0.16
GCN1-201ENST00000300648 CEP89Q96ST8 783 aa14.02□□□□□ -0.16
GCN1-201ENST00000300648 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
GCN1-201ENST00000300648 LMOD3Q0VAK6 560 aa14.01□□□□□ -0.17
GCN1-201ENST00000300648 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
GCN1-201ENST00000300648 ANKRD30AQ9BXX3 1397 aa14.01□□□□□ -0.17
GCN1-201ENST00000300648 TULP1O00294 542 aaPredicted RBP14□□□□□ -0.17
GCN1-201ENST00000300648 CC2D1BQ5T0F9 858 aaKnown RBP14□□□□□ -0.17
GCN1-201ENST00000300648 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
GCN1-201ENST00000300648 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
GCN1-201ENST00000300648 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
GCN1-201ENST00000300648 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
GCN1-201ENST00000300648 TPM2P07951 284 aa13.98□□□□□ -0.17
GCN1-201ENST00000300648 ANO8Q9HCE9 1232 aaPredicted RBP13.98□□□□□ -0.17
GCN1-201ENST00000300648 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
GCN1-201ENST00000300648 GOLGA6L19H0YKK7 550 aa13.96□□□□□ -0.17
GCN1-201ENST00000300648 CDR1P51861 262 aa13.96□□□□□ -0.17
GCN1-201ENST00000300648 ITPRIPQ8IWB1 547 aa13.96□□□□□ -0.17
GCN1-201ENST00000300648 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
GCN1-201ENST00000300648 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
GCN1-201ENST00000300648 AAMPQ13685 434 aa13.96□□□□□ -0.17
GCN1-201ENST00000300648 LRRFIP1Q32MZ4 808 aaKnown RBP13.96□□□□□ -0.17
GCN1-201ENST00000300648 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.17
GCN1-201ENST00000300648 GSE1Q14687 1217 aa13.96□□□□□ -0.18
GCN1-201ENST00000300648 STK31Q9BXU1 1019 aa13.96□□□□□ -0.18
GCN1-201ENST00000300648 GZF1Q9H116 711 aaPredicted RBP13.95□□□□□ -0.18
GCN1-201ENST00000300648 HOOK1Q9UJC3 728 aaKnown RBP13.94□□□□□ -0.18
GCN1-201ENST00000300648 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
GCN1-201ENST00000300648 STAC3Q96MF2 364 aa13.94□□□□□ -0.18
GCN1-201ENST00000300648 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
GCN1-201ENST00000300648 ARGLU1Q9NWB6 273 aaPredicted RBP13.93□□□□□ -0.18
GCN1-201ENST00000300648 KIF15Q9NS87 1388 aa13.93□□□□□ -0.18
GCN1-201ENST00000300648 DCAF11Q8TEB1 546 aa13.93□□□□□ -0.18
GCN1-201ENST00000300648 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
GCN1-201ENST00000300648 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
GCN1-201ENST00000300648 CWC15Q9P013 229 aaKnown RBP13.92□□□□□ -0.18
GCN1-201ENST00000300648 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
GCN1-201ENST00000300648 HSP90B1P14625 803 aaKnown RBP13.91□□□□□ -0.18
GCN1-201ENST00000300648 CENPJQ9HC77 1338 aaPredicted RBP13.91□□□□□ -0.18
GCN1-201ENST00000300648 APPP05067 770 aa13.91□□□□□ -0.18
GCN1-201ENST00000300648 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms