RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 RAD21O60216 631 aa12.76□□□□□ -0.37
TRIM44-201ENST00000299413 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
TRIM44-201ENST00000299413 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
TRIM44-201ENST00000299413 GGT6Q6P531 493 aa12.75□□□□□ -0.37
TRIM44-201ENST00000299413 MIER1Q8N108 512 aa12.74□□□□□ -0.37
TRIM44-201ENST00000299413 KIAA2012Q0VF49 1180 aa12.74□□□□□ -0.37
TRIM44-201ENST00000299413 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
TRIM44-201ENST00000299413 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
TRIM44-201ENST00000299413 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
TRIM44-201ENST00000299413 CDCA8Q53HL2 280 aa12.71□□□□□ -0.37
TRIM44-201ENST00000299413 GORABQ5T7V8 394 aa12.71□□□□□ -0.37
TRIM44-201ENST00000299413 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
TRIM44-201ENST00000299413 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
TRIM44-201ENST00000299413 KANK1Q14678 1352 aa12.69□□□□□ -0.38
TRIM44-201ENST00000299413 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
TRIM44-201ENST00000299413 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
TRIM44-201ENST00000299413 RASSF8Q8NHQ8 419 aa12.68□□□□□ -0.38
TRIM44-201ENST00000299413 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
TRIM44-201ENST00000299413 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
TRIM44-201ENST00000299413 MORC1Q86VD1 984 aa12.68□□□□□ -0.38
TRIM44-201ENST00000299413 NRDCO43847 1150 aa12.67□□□□□ -0.38
TRIM44-201ENST00000299413 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
TRIM44-201ENST00000299413 NOL8Q76FK4 1167 aaKnown RBP12.67□□□□□ -0.38
TRIM44-201ENST00000299413 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
TRIM44-201ENST00000299413 CWC22Q9HCG8 908 aaKnown RBP12.67□□□□□ -0.38
TRIM44-201ENST00000299413 CLIP1P30622 1438 aa12.66□□□□□ -0.38
TRIM44-201ENST00000299413 HSCBQ8IWL3 235 aa12.65□□□□□ -0.38
TRIM44-201ENST00000299413 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.38
TRIM44-201ENST00000299413 DCAF11Q8TEB1 546 aa12.65□□□□□ -0.38
TRIM44-201ENST00000299413 MCCP23508 829 aa12.64□□□□□ -0.39
TRIM44-201ENST00000299413 L1TD1Q5T7N2 865 aaKnown RBP12.64□□□□□ -0.39
TRIM44-201ENST00000299413 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
TRIM44-201ENST00000299413 MARCH6O60337 910 aa12.63□□□□□ -0.39
TRIM44-201ENST00000299413 FOXD1Q16676 465 aa12.62□□□□□ -0.39
TRIM44-201ENST00000299413 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
TRIM44-201ENST00000299413 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
TRIM44-201ENST00000299413 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
TRIM44-201ENST00000299413 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
TRIM44-201ENST00000299413 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
TRIM44-201ENST00000299413 EVA1CP58658 441 aa12.61□□□□□ -0.39
TRIM44-201ENST00000299413 TRIM6-TRIM34B2RNG4 842 aa12.61□□□□□ -0.39
TRIM44-201ENST00000299413 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
TRIM44-201ENST00000299413 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
TRIM44-201ENST00000299413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM44-201ENST00000299413 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
TRIM44-201ENST00000299413 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
TRIM44-201ENST00000299413 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
TRIM44-201ENST00000299413 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
TRIM44-201ENST00000299413 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
TRIM44-201ENST00000299413 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.39
TRIM44-201ENST00000299413 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.4
TRIM44-201ENST00000299413 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
TRIM44-201ENST00000299413 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
TRIM44-201ENST00000299413 CCNB3Q8WWL7 1395 aa12.57□□□□□ -0.4
TRIM44-201ENST00000299413 GZF1Q9H116 711 aaPredicted RBP12.56□□□□□ -0.4
TRIM44-201ENST00000299413 TMF1P82094 1093 aa12.56□□□□□ -0.4
TRIM44-201ENST00000299413 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
TRIM44-201ENST00000299413 U2AF1L5P0DN76 240 aaPredicted RBP12.56□□□□□ -0.4
TRIM44-201ENST00000299413 U2AF1Q01081 240 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM44-201ENST00000299413 GPATCH3Q96I76 525 aa12.55□□□□□ -0.4
TRIM44-201ENST00000299413 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
TRIM44-201ENST00000299413 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
TRIM44-201ENST00000299413 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
TRIM44-201ENST00000299413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.4
TRIM44-201ENST00000299413 EID1Q9Y6B2 187 aa12.52□□□□□ -0.41
TRIM44-201ENST00000299413 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
TRIM44-201ENST00000299413 AMPHP49418 695 aa12.51□□□□□ -0.41
TRIM44-201ENST00000299413 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
TRIM44-201ENST00000299413 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
TRIM44-201ENST00000299413 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
TRIM44-201ENST00000299413 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
TRIM44-201ENST00000299413 SPAG9O60271 1321 aaKnown RBP12.5□□□□□ -0.41
TRIM44-201ENST00000299413 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
TRIM44-201ENST00000299413 MS4A1P11836 297 aa12.49□□□□□ -0.41
TRIM44-201ENST00000299413 CEP89Q96ST8 783 aa12.49□□□□□ -0.41
TRIM44-201ENST00000299413 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
TRIM44-201ENST00000299413 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
TRIM44-201ENST00000299413 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
TRIM44-201ENST00000299413 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
TRIM44-201ENST00000299413 FOSBP53539 338 aa12.47□□□□□ -0.41
TRIM44-201ENST00000299413 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
TRIM44-201ENST00000299413 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
TRIM44-201ENST00000299413 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
TRIM44-201ENST00000299413 FYB1O15117 783 aa12.46□□□□□ -0.42
TRIM44-201ENST00000299413 VPS37DQ86XT2 251 aa12.46□□□□□ -0.42
TRIM44-201ENST00000299413 MTMR7Q9Y216 660 aa12.46□□□□□ -0.42
TRIM44-201ENST00000299413 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
TRIM44-201ENST00000299413 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
TRIM44-201ENST00000299413 NOL10Q9BSC4 688 aaKnown RBP12.44□□□□□ -0.42
TRIM44-201ENST00000299413 KDM4AO75164 1064 aa12.43□□□□□ -0.42
TRIM44-201ENST00000299413 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
TRIM44-201ENST00000299413 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
TRIM44-201ENST00000299413 SLC4A3P48751 1232 aa12.43□□□□□ -0.42
TRIM44-201ENST00000299413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.42□□□□□ -0.421e-7■■■■■ 74.5
TRIM44-201ENST00000299413 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
TRIM44-201ENST00000299413 TPM4P67936 248 aa12.42□□□□□ -0.42
TRIM44-201ENST00000299413 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
TRIM44-201ENST00000299413 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
TRIM44-201ENST00000299413 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
TRIM44-201ENST00000299413 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms