RNA–Protein interactions for RNA: ENST00000299299.3

PCBD1-201, Transcript of pterin-4 alpha-carbinolamine dehydratase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBD1, Length 1,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBD1-201ENST00000299299 MYO5CQ9NQX4 1742 aa21.53■■□□□ 1.04
PCBD1-201ENST00000299299 FBXO41Q8TF61 875 aa21.53■■□□□ 1.04
PCBD1-201ENST00000299299 ARID4BQ4LE39 1312 aaPredicted RBP21.53■■□□□ 1.04
PCBD1-201ENST00000299299 MADDQ8WXG6 1647 aa21.51■■□□□ 1.03
PCBD1-201ENST00000299299 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
PCBD1-201ENST00000299299 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
PCBD1-201ENST00000299299 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
PCBD1-201ENST00000299299 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
PCBD1-201ENST00000299299 ZMYM4Q5VZL5 1548 aa21.49■■□□□ 1.03
PCBD1-201ENST00000299299 SCAPERQ9BY12 1400 aa21.46■■□□□ 1.03
PCBD1-201ENST00000299299 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
PCBD1-201ENST00000299299 RIMS1Q86UR5 1692 aaKnown RBP21.45■■□□□ 1.02
PCBD1-201ENST00000299299 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
PCBD1-201ENST00000299299 ZFYVE16Q7Z3T8 1539 aa21.43■■□□□ 1.02
PCBD1-201ENST00000299299 LMTK3Q96Q04 1460 aa21.41■■□□□ 1.02
PCBD1-201ENST00000299299 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
PCBD1-201ENST00000299299 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
PCBD1-201ENST00000299299 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
PCBD1-201ENST00000299299 ABCC1P33527 1531 aa21.39■■□□□ 1.02
PCBD1-201ENST00000299299 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
PCBD1-201ENST00000299299 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.01
PCBD1-201ENST00000299299 MAGI2Q86UL8 1455 aa21.39■■□□□ 1.01
PCBD1-201ENST00000299299 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
PCBD1-201ENST00000299299 KDM5CP41229 1560 aa21.36■■□□□ 1.01
PCBD1-201ENST00000299299 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
PCBD1-201ENST00000299299 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
PCBD1-201ENST00000299299 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
PCBD1-201ENST00000299299 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
PCBD1-201ENST00000299299 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
PCBD1-201ENST00000299299 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
PCBD1-201ENST00000299299 TIAM1Q13009 1591 aa21.31■■□□□ 1
PCBD1-201ENST00000299299 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
PCBD1-201ENST00000299299 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
PCBD1-201ENST00000299299 SIGLEC1Q9BZZ2 1709 aa21.3■■□□□ 1
PCBD1-201ENST00000299299 FER1L4A9Z1Z3 1794 aa21.3■■□□□ 1
PCBD1-201ENST00000299299 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
PCBD1-201ENST00000299299 AFAP1Q8N556 730 aa21.29■■□□□ 1
PCBD1-201ENST00000299299 C9orf84Q5VXU9 1444 aa21.29■■□□□ 1
PCBD1-201ENST00000299299 HSPA2P54652 639 aa21.27■■□□□ 1
PCBD1-201ENST00000299299 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
PCBD1-201ENST00000299299 ATP10AO60312 1499 aa21.26■□□□□ 0.99
PCBD1-201ENST00000299299 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
PCBD1-201ENST00000299299 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
PCBD1-201ENST00000299299 MLECQ14165 292 aa21.24■□□□□ 0.99
PCBD1-201ENST00000299299 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
PCBD1-201ENST00000299299 ABCA6Q8N139 1617 aa21.24■□□□□ 0.99
PCBD1-201ENST00000299299 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
PCBD1-201ENST00000299299 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
PCBD1-201ENST00000299299 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
PCBD1-201ENST00000299299 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
PCBD1-201ENST00000299299 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
PCBD1-201ENST00000299299 MYT1LQ9UL68 1186 aa21.21■□□□□ 0.99
PCBD1-201ENST00000299299 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
PCBD1-201ENST00000299299 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
PCBD1-201ENST00000299299 PREX1Q8TCU6 1659 aa21.17■□□□□ 0.98
PCBD1-201ENST00000299299 HNRNPMP52272 730 aaKnown RBP eCLIP21.16■□□□□ 0.98
PCBD1-201ENST00000299299 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
PCBD1-201ENST00000299299 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
PCBD1-201ENST00000299299 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.98
PCBD1-201ENST00000299299 CERKQ8TCT0 537 aa21.14■□□□□ 0.97
PCBD1-201ENST00000299299 ATP7AQ04656 1500 aa21.14■□□□□ 0.97
PCBD1-201ENST00000299299 CAMSAP2Q08AD1 1489 aa21.13■□□□□ 0.97
PCBD1-201ENST00000299299 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
PCBD1-201ENST00000299299 SPAG9O60271 1321 aaKnown RBP21.12■□□□□ 0.97
PCBD1-201ENST00000299299 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
PCBD1-201ENST00000299299 AGLP35573 1532 aa21.11■□□□□ 0.97
PCBD1-201ENST00000299299 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
PCBD1-201ENST00000299299 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
PCBD1-201ENST00000299299 APLP2Q06481 763 aa21.06■□□□□ 0.96
PCBD1-201ENST00000299299 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
PCBD1-201ENST00000299299 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
PCBD1-201ENST00000299299 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
PCBD1-201ENST00000299299 A2MP01023 1474 aa21.03■□□□□ 0.96
PCBD1-201ENST00000299299 DMRT2Q9Y5R5 561 aa21.03■□□□□ 0.96
PCBD1-201ENST00000299299 SETD1BQ9UPS6 1966 aaKnown RBP21.03■□□□□ 0.96
PCBD1-201ENST00000299299 STRCQ7RTU9 1775 aa21.01■□□□□ 0.95
PCBD1-201ENST00000299299 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
PCBD1-201ENST00000299299 RTEL1-TNFRSF6BF6WH68 1400 aa21■□□□□ 0.95
PCBD1-201ENST00000299299 MIA2Q96PC5 1412 aa20.99■□□□□ 0.95
PCBD1-201ENST00000299299 C3P01024 1663 aa20.97■□□□□ 0.95
PCBD1-201ENST00000299299 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
PCBD1-201ENST00000299299 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
PCBD1-201ENST00000299299 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
PCBD1-201ENST00000299299 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
PCBD1-201ENST00000299299 DISP3Q9P2K9 1392 aa20.92■□□□□ 0.94
PCBD1-201ENST00000299299 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
PCBD1-201ENST00000299299 PTPRTO14522 1441 aa20.9■□□□□ 0.94
PCBD1-201ENST00000299299 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
PCBD1-201ENST00000299299 DHX29Q7Z478 1369 aaKnown RBP20.9■□□□□ 0.94
PCBD1-201ENST00000299299 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
PCBD1-201ENST00000299299 PTPN23Q9H3S7 1636 aa20.89■□□□□ 0.94
PCBD1-201ENST00000299299 TSPY4P0CV99 314 aa20.87■□□□□ 0.93
PCBD1-201ENST00000299299 TSPY10P0CW01 314 aa20.87■□□□□ 0.93
PCBD1-201ENST00000299299 TCOF1Q13428 1488 aaKnown RBP20.86■□□□□ 0.93
PCBD1-201ENST00000299299 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
PCBD1-201ENST00000299299 GGT6Q6P531 493 aa20.85■□□□□ 0.93
PCBD1-201ENST00000299299 SHANK2Q9UPX8 1470 aa20.85■□□□□ 0.93
PCBD1-201ENST00000299299 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.93
PCBD1-201ENST00000299299 ABCC5O15440 1437 aa20.83■□□□□ 0.93
PCBD1-201ENST00000299299 SPATA31D1Q6ZQQ2 1576 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms