RNA–Protein interactions for RNA: ENST00000297904.3

VEGFD-201, Transcript of vascular endothelial growth factor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFD, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFD-201ENST00000297904 TRAK2O60296 914 aa10.02□□□□□ -0.81
VEGFD-201ENST00000297904 CECR2Q9BXF3 1484 aa10.01□□□□□ -0.81
VEGFD-201ENST00000297904 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
VEGFD-201ENST00000297904 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
VEGFD-201ENST00000297904 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
VEGFD-201ENST00000297904 RBM25P49756 843 aaKnown RBP10□□□□□ -0.81
VEGFD-201ENST00000297904 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
VEGFD-201ENST00000297904 TMCO4Q5TGY1 634 aa9.99□□□□□ -0.81
VEGFD-201ENST00000297904 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
VEGFD-201ENST00000297904 TTBK1Q5TCY1 1321 aaPredicted RBP9.99□□□□□ -0.81
VEGFD-201ENST00000297904 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
VEGFD-201ENST00000297904 PYGBP11216 843 aa9.98□□□□□ -0.81
VEGFD-201ENST00000297904 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
VEGFD-201ENST00000297904 A6NJR5 290 aa9.96□□□□□ -0.81
VEGFD-201ENST00000297904 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
VEGFD-201ENST00000297904 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
VEGFD-201ENST00000297904 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
VEGFD-201ENST00000297904 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
VEGFD-201ENST00000297904 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
VEGFD-201ENST00000297904 PPP1R37O75864 691 aa9.91□□□□□ -0.82
VEGFD-201ENST00000297904 RASEFQ8IZ41 740 aa9.91□□□□□ -0.82
VEGFD-201ENST00000297904 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.82
VEGFD-201ENST00000297904 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
VEGFD-201ENST00000297904 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
VEGFD-201ENST00000297904 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
VEGFD-201ENST00000297904 RETREG2Q8NC44 543 aa9.89□□□□□ -0.83
VEGFD-201ENST00000297904 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
VEGFD-201ENST00000297904 CDK11BP21127 795 aaKnown RBP9.88□□□□□ -0.83
VEGFD-201ENST00000297904 CDK11AQ9UQ88 783 aaPredicted RBP9.88□□□□□ -0.83
VEGFD-201ENST00000297904 BAZ1AQ9NRL2 1556 aaPredicted RBP9.88□□□□□ -0.83
VEGFD-201ENST00000297904 NCAPD3P42695 1498 aa9.86□□□□□ -0.83
VEGFD-201ENST00000297904 IRF5Q13568 498 aa9.85□□□□□ -0.83
VEGFD-201ENST00000297904 CCDC97Q96F63 343 aaPredicted RBP9.85□□□□□ -0.83
VEGFD-201ENST00000297904 SMARCA2P51531 1590 aa9.85□□□□□ -0.83
VEGFD-201ENST00000297904 NCKAP5LQ9HCH0 1330 aa9.85□□□□□ -0.83
VEGFD-201ENST00000297904 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
VEGFD-201ENST00000297904 HSP90B1P14625 803 aaKnown RBP9.84□□□□□ -0.83
VEGFD-201ENST00000297904 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
VEGFD-201ENST00000297904 SERPINA10Q9UK55 444 aa9.83□□□□□ -0.84
VEGFD-201ENST00000297904 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
VEGFD-201ENST00000297904 HMGXB3Q12766 1538 aa9.82□□□□□ -0.84
VEGFD-201ENST00000297904 MCM6Q14566 821 aa9.82□□□□□ -0.84
VEGFD-201ENST00000297904 PROSER2Q86WR7 435 aaPredicted RBP9.82□□□□□ -0.84
VEGFD-201ENST00000297904 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
VEGFD-201ENST00000297904 PEG3Q9GZU2 1588 aa9.81□□□□□ -0.84
VEGFD-201ENST00000297904 E9PSI1 815 aa9.81□□□□□ -0.84
VEGFD-201ENST00000297904 MNX1P50219 401 aaPredicted RBP9.8□□□□□ -0.84
VEGFD-201ENST00000297904 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
VEGFD-201ENST00000297904 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
VEGFD-201ENST00000297904 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
VEGFD-201ENST00000297904 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
VEGFD-201ENST00000297904 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
VEGFD-201ENST00000297904 PUS7Q96PZ0 661 aaKnown RBP9.76□□□□□ -0.85
VEGFD-201ENST00000297904 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
VEGFD-201ENST00000297904 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
VEGFD-201ENST00000297904 USP35Q9P2H5 1018 aa9.75□□□□□ -0.85
VEGFD-201ENST00000297904 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
VEGFD-201ENST00000297904 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
VEGFD-201ENST00000297904 GPR37O15354 613 aa9.73□□□□□ -0.85
VEGFD-201ENST00000297904 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
VEGFD-201ENST00000297904 MFSD10Q14728 455 aa9.73□□□□□ -0.85
VEGFD-201ENST00000297904 CREBZFQ9NS37 354 aa9.73□□□□□ -0.85
VEGFD-201ENST00000297904 FBXO22Q8NEZ5 403 aa9.72□□□□□ -0.85
VEGFD-201ENST00000297904 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
VEGFD-201ENST00000297904 PDE4AP27815 886 aa9.72□□□□□ -0.85
VEGFD-201ENST00000297904 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
VEGFD-201ENST00000297904 PCMTD1Q96MG8 357 aaPredicted RBP9.72□□□□□ -0.85
VEGFD-201ENST00000297904 AMHR2Q16671 573 aa9.71□□□□□ -0.86
VEGFD-201ENST00000297904 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
VEGFD-201ENST00000297904 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
VEGFD-201ENST00000297904 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
VEGFD-201ENST00000297904 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
VEGFD-201ENST00000297904 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
VEGFD-201ENST00000297904 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
VEGFD-201ENST00000297904 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
VEGFD-201ENST00000297904 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
VEGFD-201ENST00000297904 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
VEGFD-201ENST00000297904 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
VEGFD-201ENST00000297904 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
VEGFD-201ENST00000297904 WIZO95785 1651 aa9.66□□□□□ -0.86
VEGFD-201ENST00000297904 IRF6O14896 467 aa9.66□□□□□ -0.86
VEGFD-201ENST00000297904 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
VEGFD-201ENST00000297904 NLRP6P59044 892 aa9.65□□□□□ -0.86
VEGFD-201ENST00000297904 EFCAB3Q8N7B9 438 aa9.65□□□□□ -0.86
VEGFD-201ENST00000297904 RNF39Q9H2S5 420 aa9.65□□□□□ -0.86
VEGFD-201ENST00000297904 SUPT16HQ9Y5B9 1047 aaKnown RBP9.65□□□□□ -0.86
VEGFD-201ENST00000297904 CEP162Q5TB80 1403 aa9.65□□□□□ -0.86
VEGFD-201ENST00000297904 PSEN1P49768 467 aa9.65□□□□□ -0.87
VEGFD-201ENST00000297904 MS4A1P11836 297 aa9.63□□□□□ -0.87
VEGFD-201ENST00000297904 DSG3P32926 999 aa9.63□□□□□ -0.87
VEGFD-201ENST00000297904 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
VEGFD-201ENST00000297904 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
VEGFD-201ENST00000297904 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
VEGFD-201ENST00000297904 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
VEGFD-201ENST00000297904 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
VEGFD-201ENST00000297904 ZNF330Q9Y3S2 320 aaPredicted RBP9.6□□□□□ -0.87
VEGFD-201ENST00000297904 DPYSL4O14531 572 aa9.6□□□□□ -0.87
VEGFD-201ENST00000297904 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
VEGFD-201ENST00000297904 NESP48681 1621 aa9.59□□□□□ -0.87
VEGFD-201ENST00000297904 TOP2AP11388 1531 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms